Ggra1297.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1297.t1
Unique NameGgra1297.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length347
Homology
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BLAST of Ggra1297.t1 vs. uniprot
Match: A0A2V3IR85 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR85_9FLOR)

HSP 1 Score: 313 bits (802), Expect = 6.640e-102
Identity = 166/353 (47.03%), Postives = 212/353 (60.06%), Query Frame = 0 
Query:   10 LSALFALAYSQSLQIYQASVPGPISSWPAGPALSGDVTLCQDDLPSPFTVVCFPPTGASISYAKFYVNGQMVRTERMAPYVLSGDTSRSGAFPWTNPPAVSELTCRLSTGQTVTSTIRFSC-------GDAAPATAPPATMPATTTMAQTTTVAPPXMPATQVMPRSGGGS-----------GCVYLPATGFDTSDGDWKAGGGGMEYRMNDPSIKVDPIGRGTMTYSFTAPVTGRYALTLDMLTSDGTEHNDVWIEIDGVPFTLVKKNSSRDGKSGMNKAYHNRNGRSKIVYTVDFNAHVFSTKGDLQAGKSYTVKVGGRSTKVRVYAIILFPCAEFGCAPGTAWNSAMNQC 344
            L  L ALA  Q+L+IYQASVPG +S+W  GP L  + TLC   +PSP TVVC P     +  A FY++G   RTER+ PY L GDT ++GA PW     V++++C LS G +V STI F+C        D AP T PP T  A+T           X                          C+Y+ AT +    G W+    GM Y+ N+PS  +D  G  T+ Y+FT   + RY LT+DM T  GTEHNDVW+EI  VPFTLV+ + +R G +GMNKAYHN+NGRSK VYTVDF+ HVFST+  L+AGK Y VKVGGRSTKV ++ +ILFPC++F CA G  WN+A+N C
Sbjct:    7 LPLLLALANCQTLRIYQASVPGRMSNWQPGPLLQSESTLCPKHIPSPLTVVCLPGADKHVKSASFYIDGDFERTERVMPYTLKGDTFKAGARPWITRARVTKVSCVLSNGDSVASTITFACPDPSGPRSDVAPTTVPPTTTAASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCIYIDATKYMEKTGAWELVSNGMAYKRNNPSTGIDKPGVATLRYAFTPTESKRYTLTVDMTTDHGTEHNDVWVEIANVPFTLVQGSKTRPGAAGMNKAYHNKNGRSKTVYTVDFDGHVFSTRDALEAGKRYEVKVGGRSTKVVLHGVILFPCSDFSCAHGGKWNAALNSC 359
The following BLAST results are available for this feature:
BLAST of Ggra1297.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IR856.640e-10247.03Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..346
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000235_piloncontigtig00000235_pilon:67970..69010 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1297.t1Ggra1297.t1Gracilaria gracilis GNS1m malemRNAtig00000235_pilon 67970..69010 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1297.t1 ID=Ggra1297.t1|Name=Ggra1297.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=347bp
MSRSLLVLALSALFALAYSQSLQIYQASVPGPISSWPAGPALSGDVTLCQ
DDLPSPFTVVCFPPTGASISYAKFYVNGQMVRTERMAPYVLSGDTSRSGA
FPWTNPPAVSELTCRLSTGQTVTSTIRFSCGDAAPATAPPATMPATTTMA
QTTTVAPPTMPATQVMPRSGGGSGCVYLPATGFDTSDGDWKAGGGGMEYR
MNDPSIKVDPIGRGTMTYSFTAPVTGRYALTLDMLTSDGTEHNDVWIEID
GVPFTLVKKNSSRDGKSGMNKAYHNRNGRSKIVYTVDFNAHVFSTKGDLQ
AGKSYTVKVGGRSTKVRVYAIILFPCAEFGCAPGTAWNSAMNQCSA*
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