Ggra1294.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1294.t1
Unique NameGgra1294.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length464
Homology
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BLAST of Ggra1294.t1 vs. uniprot
Match: A0A2V3IQ94 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ94_9FLOR)

HSP 1 Score: 271 bits (692), Expect = 2.020e-82
Identity = 152/446 (34.08%), Postives = 239/446 (53.59%), Query Frame = 0 
Query:   54 CVPFEALLLQSFRKCCSLQRRGVPKSFVHPFYKAAIVEVLASIRVSYAPSTLLKNTCLPHQRAYFIRDKLKLASVLNAIRKTYDEEQEFFFLPYEEYSDKQIGMSSKDVRVIMGSTWKKIATQFSRPLNQVQMRSLYQLPNSLTLFFDPNHKAAKETFELYETGKEDTVGAPQLVKRVLQIITRLEVVQVPRKHSAQLLKHCVAFVFSACRSYRREGDELLLPAFFMAFYGEAERMLTEKEKKAGSELARIPLWLIQKHMKDEIKLICSFRTLGVLRYPVASHDGVVSIHELDVGVFRKVGMIRKEWENARGRIKIRMLG----------------SAVH--------------------KAFKCRKGSFYYRTISGADSTKNCCISVCEAAELIHRIGMGSKRDCCRGCNVAKCAIDSTSRIRQVSTIRVEPYGYSPAGVIPISL 463
            C+ F ++L Q +R+CC+L  RGVP+S   P+ K  +  +++ +R +Y P T L   C+  +  +  R +L+L +  +  +  Y      F LP     +K  GM + + R  +  TW +I+   S P+ +V + +L QLP SL L  DPNH  A++    Y T + D + AP LV++VL II ++EV+ +PR  S Q+L+HC A VF  CR +R+E  +L +P+ F + Y E  + + +  +   SEL  +P   +  H K+EI+ + SF+T G LRYPV S D  VS+ +L+ GV  K+  I  E    R R K  M                  +AVH                    KA KC K   +++    A S +NCC ++C + EL+HR+GM SK++CC  CN+A+C+I  +S++  ++TI +   G SPAG I I++
Sbjct:   21 CISFNSILFQLYRRCCALGSRGVPESITQPYLKTIVSGLVSQMRKTYLPETRLNKICISPKDLHGFRLELELKACPSISQDAYGTH--LFHLPNSLQYEKAAGMMNSETRGAVRRTWFRISNHLSSPVRKVDIEALSQLPPSLELLHDPNHNPAQDELWKYTTDEGDIIAAPLLVEQVLGIILKMEVLSMPRTVSVQILRHCAALVFLGCRVHRKEFHDLFIPSVFTSMYNEVLQSVVDVSQL--SELPNMPEHFVWMHFKEEIRDLTSFKTWGRLRYPVLSPDCRVSVKDLEKGVLTKMSFIAGELNKYRRRTKASMFSEINVQTFLQNRNYRPFAAVHEFSGRKGAHEASTDVPLYFRKAGKCPKTHLFFKLQENA-SPRNCCAAICGSIELVHRLGMTSKKNCCLECNLARCSIRESSKLASLTTIHLPACGLSPAGSISITI 461
The following BLAST results are available for this feature:
BLAST of Ggra1294.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQ942.020e-8234.08Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 63..463
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..36
NoneNo IPR availableTMHMMTMhelixcoord: 40..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000235_piloncontigtig00000235_pilon:61267..62658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1294.t1Ggra1294.t1Gracilaria gracilis GNS1m malemRNAtig00000235_pilon 61267..62658 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1294.t1 ID=Ggra1294.t1|Name=Ggra1294.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=464bp
MRLRLFKRRRYLFAFVLKRDLLSEHSLITANKMFRELATVLVFLLLVPSI
LTLCVPFEALLLQSFRKCCSLQRRGVPKSFVHPFYKAAIVEVLASIRVSY
APSTLLKNTCLPHQRAYFIRDKLKLASVLNAIRKTYDEEQEFFFLPYEEY
SDKQIGMSSKDVRVIMGSTWKKIATQFSRPLNQVQMRSLYQLPNSLTLFF
DPNHKAAKETFELYETGKEDTVGAPQLVKRVLQIITRLEVVQVPRKHSAQ
LLKHCVAFVFSACRSYRREGDELLLPAFFMAFYGEAERMLTEKEKKAGSE
LARIPLWLIQKHMKDEIKLICSFRTLGVLRYPVASHDGVVSIHELDVGVF
RKVGMIRKEWENARGRIKIRMLGSAVHKAFKCRKGSFYYRTISGADSTKN
CCISVCEAAELIHRIGMGSKRDCCRGCNVAKCAIDSTSRIRQVSTIRVEP
YGYSPAGVIPISL*
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