Ggra1289.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1289.t1
Unique NameGgra1289.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length211
Homology
BLAST of Ggra1289.t1 vs. uniprot
Match: A0A2V3J0L8 (ER membrane protein complex subunit 8/9-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0L8_9FLOR)

HSP 1 Score: 260 bits (664), Expect = 2.710e-85
Identity = 126/210 (60.00%), Postives = 165/210 (78.57%), Query Frame = 0
Query:    1 MASMRYKLSDVSYATIILHAQQHPSNIIGVLLGTITTECVEIDTALPLIHSDLTMFTSPMHEMSLLLSEQKARQHKKQIVGIYYSNALIDDTSIAEIPTLTANAVQTRTGSTCLLMIDAKNLLKDTRKERHAFRVFVRNGEVSGTWGRSEVPHDTLQVSDRALKLVDALLDGSILKNEHLFVADFEDHCNDPCVDWMNIKLSSRLNALQL 210
            M S  Y +SD +Y TIILHA ++P+ I GV+LG+I ++   I++A+PLIHSDL MFTSP+HE++LLLSEQKA+Q    I+GIYY+NA+ DD SI  +PT  ANAVQ RTGS CLL+++AKNL +D RK RHAFRV VR+GE+ G+WG+SEV H+TLQVSDRALK+ DA+L G +L+++   + DFEDHC DP  DW+N KL +RLN +QL
Sbjct:    1 MPSPVYSISDAAYNTIILHALKYPTTISGVVLGSIGSQACAIESAIPLIHSDLAMFTSPLHEVALLLSEQKAKQDGMHILGIYYANAVADDRSIGVVPTHLANAVQKRTGSACLLLLNAKNLSEDVRKCRHAFRVCVRDGEIRGSWGKSEVQHETLQVSDRALKVADAILGGVVLRDQKERIVDFEDHCADPSTDWLNAKLVTRLNEMQL 210          
BLAST of Ggra1289.t1 vs. uniprot
Match: A0A8H7SJ54 (MPN domain-containing protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SJ54_9FUNG)

HSP 1 Score: 69.7 bits (169), Expect = 2.730e-11
Identity = 51/193 (26.42%), Postives = 96/193 (49.74%), Query Frame = 0
Query:    7 KLSDVSYATIILHAQQHPSNII-GVLLGTITTECVEIDTALPLIHSDLTMFTSPMHEMSLLLSEQKARQHKKQIVGIYYSNALIDDTSIAEIPTLTANAVQTRTGSTCLLMIDAKNLLKDTRKERHAFRVFVRNGEVSGTWGRSEVPHDTLQVSDRALKLVDALLDGSILKNEHLFVADFEDHCNDPCVDWMN 198
            K+   +YA  +LHA ++PS+ + GVLLGT TT+ ++++TA+P  H   T+  +PM E++L  +E  A+++   IVG YYSNA  +D  + +     A  ++   G   ++ +          ++  A  V              + P ++ +VS    K   + + G    + +  V DF++H  +  +DW++
Sbjct:    5 KVDVHAYAVPLLHAAKYPSSAVCGVLLGTNTTDGLQVETAVPFFHHWTTL--TPMLEVALKQTEIYAKKNNLVIVGCYYSNARTEDNVLPDRAIKLAETIKKNNGDKAIIFLVNNKQFSKLEQDESAITV--------------KEPFNSEEVS-LIQKDTYSKVRGLFSSSAYNRVYDFDEHVENVSLDWLS 180          
BLAST of Ggra1289.t1 vs. uniprot
Match: A0A7S2TTX1 (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TTX1_9EUKA)

HSP 1 Score: 62.4 bits (150), Expect = 1.720e-8
Identity = 56/206 (27.18%), Postives = 93/206 (45.15%), Query Frame = 0
Query:    2 ASMRYKLSDVSYATIILHAQQHPSN-IIGVLLG-------TITTECVEIDTALPLIHSDLTMFTSPMHEMSLLLSEQKARQHKKQIVGIYYSNALIDDTSIAEIPTLTANAVQTRTGSTCLLMIDAKNLLKDTRKERH--AFRVFVRNGEVSGTWGRSEVPHDTLQVSDRALKLVDALLDGSILKNEHLFVADFEDHCNDPCVDWM 197
            A+   +L+  +YA IILHA QHPS  + G++LG           ECV +  + P+          PM E++L+  ++  +  KK IVG Y++N L++DT + +I       +        + ++D   L+    KE    A+     + +   T  + E   +TLQ      KLV  L  G     +   + DF+ H  DP + W+
Sbjct:   13 AAYGLELAPEAYAKIILHAAQHPSRPVCGLMLGGEGAGGGVSVEECVALFHSYPM---------GPMLELALMQVDEVCKTSKKDIVGCYWANELLEDTGVHKIARRIGTQISKFFKKASIAIVD-NTLIGKEEKELALVAYPATANDSKKCATKMKGE-RKETLQ------KLVSQLKSG-----KWETIVDFDSHLADPSLPWL 196          
BLAST of Ggra1289.t1 vs. uniprot
Match: A0A5C3EC09 (MPN domain-containing protein n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3EC09_9BASI)

HSP 1 Score: 60.1 bits (144), Expect = 1.280e-7
Identity = 49/198 (24.75%), Postives = 92/198 (46.46%), Query Frame = 0
Query:    8 LSDVSYATIILHAQQHPS-NIIGVLLGTITTE---CVEIDTALPLIHSDLTMFTSPMHEMSLLLSEQKARQHKKQIVGIYYSNALIDDTSIAEIPTLTANAVQTRTGSTCLLMIDAKNLLKDTRKERHAFRVFVRNGEVSGTWGRSEVPHD----TLQVSDRALKLVDALLDGSILKNEHLFVADFEDHCNDPCVDWM 197
            +S ++Y  ++LH  ++P+  ++G+LL   T+     V I  ++PL H    +  +PM E++L L+   A      +VG+Y +  L+ D + ++  +  A  + T      LL++     L +     H+   +  +   SG       P      TLQ  ++A +L  A+    I +     + DF+DH  DP +DW+
Sbjct:    9 VSPLAYKKLVLHTAKYPTARVLGLLLADSTSSPSGSVTISDSIPLSHHWTAL--APMAEVALSLATSYASSKNLTVVGLYEAPELVSDRAPSQQASKLAEKIATLANREALLLLVNNATLLNPHN--HSLSGYSVSANASGKGEAKSKPLQGSAVTLQDENKAKQLESAVKKERIWQK----IVDFDDHLEDPSLDWL 198          
BLAST of Ggra1289.t1 vs. uniprot
Match: A0A7S2TSE1 (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TSE1_9EUKA)

HSP 1 Score: 53.5 bits (127), Expect = 5.890e-6
Identity = 34/99 (34.34%), Postives = 54/99 (54.55%), Query Frame = 0
Query:    2 ASMRYKLSDVSYATIILHAQQHPSN-IIGVLLG-------TITTECVEIDTALPLIHSDLTMFTSPMHEMSLLLSEQKARQHKKQIVGIYYSNALIDDT 92
            A+   +L+  +YA IILHA QHPS  + G++LG           ECV +  + P+          PM E++L+  ++  +  KK IVG Y++N L++DT
Sbjct:   13 AAYGLELAPEAYAKIILHAAQHPSRPVCGLMLGGEGAGGGVSVEECVALFHSYPM---------GPMLELALMQVDEVCKTSKKDIVGCYWANELLEDT 102          
The following BLAST results are available for this feature:
BLAST of Ggra1289.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J0L82.710e-8560.00ER membrane protein complex subunit 8/9-like n=1 T... [more]
A0A8H7SJ542.730e-1126.42MPN domain-containing protein n=1 Tax=Thamnidium e... [more]
A0A7S2TTX11.720e-827.18Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A5C3EC091.280e-724.75MPN domain-containing protein n=2 Tax=Ustilago tri... [more]
A0A7S2TSE15.890e-634.34Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005366ER membrane protein complex subunit 8/9PFAMPF03665UPF0172coord: 6..200
e-value: 2.3E-31
score: 109.4
IPR005366ER membrane protein complex subunit 8/9PANTHERPTHR12941ER MEMBRANE PROTEIN COMPLEXcoord: 2..203
NoneNo IPR availableGENE3D3.40.140.10Cytidine Deaminase, domain 2coord: 4..152
e-value: 5.6E-7
score: 31.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000235_piloncontigtig00000235_pilon:41456..42088 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1289.t1Ggra1289.t1Gracilaria gracilis GNS1m malemRNAtig00000235_pilon 41456..42088 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1289.t1 ID=Ggra1289.t1|Name=Ggra1289.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=211bp
MASMRYKLSDVSYATIILHAQQHPSNIIGVLLGTITTECVEIDTALPLIH
SDLTMFTSPMHEMSLLLSEQKARQHKKQIVGIYYSNALIDDTSIAEIPTL
TANAVQTRTGSTCLLMIDAKNLLKDTRKERHAFRVFVRNGEVSGTWGRSE
VPHDTLQVSDRALKLVDALLDGSILKNEHLFVADFEDHCNDPCVDWMNIK
LSSRLNALQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005366EMC8/9