Ggra1287.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1287.t1
Unique NameGgra1287.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length417
Homology
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BLAST of Ggra1287.t1 vs. uniprot
Match: A0A2V3IR74 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR74_9FLOR)

HSP 1 Score: 401 bits (1031), Expect = 3.830e-136
Identity = 192/262 (73.28%), Postives = 230/262 (87.79%), Query Frame = 0 
Query:   73 VLQVPDNTTDYEGVPLGSIVTIVETEVPLLDSIQAAQRALPACTGIFISPSQILSSAHCVYKQRQNESEEAYWTYGDDNPHNTFLYAIAGKVNAVDSTFDVYKLVQGCIPQSYVDAENEEVTSVMSNDLVVFQIEGEFVGDPLSIGTIAPSIVYDVVYEYMLPQYPSDVNDGRSLVIDKNTTPILFEPLGSGVFFSVDLASWSGSSGGPIIDMNATRTSGSPTIVGVLMSSGWAVCDSGIVPVTSGIPIVKELITSTSNARR 334
            +L VPD+ T YEGVPLG +VTIVETEVPL +SI AAQRALPACTG+F+SP+QI+SSAHCV+ ++Q+ESEE YW +GD N HNTFLYAIAGKV+A D++FDVYKLV GC+PQSYVDAE+E+ TS M NDLVVF++EG F GD  SIG IA SIVYD+   Y+LPQYPSDV++GRSLVID NTTPI+FEPLG GVFFS+DLASWSGSSGGPIID+NATR+SG P +VGVLMSSGW+VCDSGIVPVT+ IP+V+EL+T+ S A++
Sbjct:    1 MLNVPDSATHYEGVPLGGVVTIVETEVPLHESIAAAQRALPACTGMFVSPTQIISSAHCVFHRKQDESEEPYWMFGDGNLHNTFLYAIAGKVDAEDNSFDVYKLVTGCVPQSYVDAESEDATSSMGNDLVVFEVEGNFTGDLSSIGNIANSIVYDIPRNYLLPQYPSDVDEGRSLVIDMNTTPIVFEPLGDGVFFSIDLASWSGSSGGPIIDVNATRSSGRPCVVGVLMSSGWSVCDSGIVPVTTAIPLVQELLTTASIAQK 262
The following BLAST results are available for this feature:
BLAST of Ggra1287.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IR743.830e-13673.28Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldGENE3D2.40.10.10coord: 219..299
e-value: 6.0E-8
score: 34.8
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldGENE3D2.40.10.10coord: 113..218
e-value: 6.0E-8
score: 34.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 399..416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 390..416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 332..353
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..416
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 96..326

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000235_piloncontigtig00000235_pilon:32327..33752 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1287.t1Ggra1287.t1Gracilaria gracilis GNS1m malemRNAtig00000235_pilon 32327..33752 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1287.t1 ID=Ggra1287.t1|Name=Ggra1287.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=417bp
MNAFLLLTAAVLLAFGNAQTNCRPQTLIDEENRSPMVISLDLHQNSLRRR
RGPNSLPPLLQRSIVECESTIEVLQVPDNTTDYEGVPLGSIVTIVETEVP
LLDSIQAAQRALPACTGIFISPSQILSSAHCVYKQRQNESEEAYWTYGDD
NPHNTFLYAIAGKVNAVDSTFDVYKLVQGCIPQSYVDAENEEVTSVMSND
LVVFQIEGEFVGDPLSIGTIAPSIVYDVVYEYMLPQYPSDVNDGRSLVID
KNTTPILFEPLGSGVFFSVDLASWSGSSGGPIIDMNATRTSGSPTIVGVL
MSSGWAVCDSGIVPVTSGIPIVKELITSTSNARRGRGEGKGTGSTFVTTE
TLNHEREPVPSLDFVEGSPEPLELRTIDDTEISDETDYFPMFSSEEETEP
YKNTVHKDEASSNYRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043504Peptidase_S1_PA_chymotrypsin
IPR009003Peptidase_S1_PA