Ggra1279.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra1279.t2
Unique Name	Ggra1279.t2
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	253

Homology

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BLAST of Ggra1279.t2 vs. uniprot
Match: A0A2V3ISY3 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISY3_9FLOR)

HSP 1 Score: 190 bits (482), Expect = 3.470e-56
Identity = 133/226 (58.85%), Postives = 145/226 (64.16%), Query Frame = 0

Query:    7 SKARLRLHFLLQPS---PPGADDCSAPLPSLSDLQRPLSSPPALPPPRALSADSALPYASSPLCAHATL-HSACASAPAPPALSRAVARAAATPMHSPPRTPFPS-------------GPSFAPTPXXXXXXXXXXXPRALDKRELRRMKNRISAARSRQRKSDTFDSLTRELAEAKQVINALTVQLDRRNEAVVVAVPHDLRQVLGRDYVSVDFLMDVLRGFVAR 215
            SK RLR+ +LLQP+      +      LPSLSDLQ  L  PPALPPPRALSADSALPY +S    HA   H        P  +     + + TP  SP  TP PS             GPSF+PTP           P  LDKRELRRMKNRISAARSRQRKSD FDSLTRELAEAKQVI+ALTVQL  R EA VVAVPHDLR VLG D+VSVDFLMDVLRGFV+R
Sbjct:   17 SKTRLRVRYLLQPTNIASSASXXXXXXLPSLSDLQHRLPCPPALPPPRALSADSALPYPTS----HAFQNHIHAPQNTLPHHVPLTSPQNSLTPTSSPSMTPTPSIHCMQIVTTPTPSGPSFSPTPPASAPPRP---PAMLDKRELRRMKNRISAARSRQRKSDNFDSLTRELAEAKQVIHALTVQLSNRKEATVVAVPHDLRHVLGHDFVSVDFLMDVLRGFVSR 235

The following BLAST results are available for this feature:

BLAST of Ggra1279.t2 vs. uniprot

BLAST of Ggra1279.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3ISY3	3.470e-56	58.85	BZIP domain-containing protein n=1 Tax=Gracilariop...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 155..182
None	No IPR available	GENE3D	1.20.5.170		coord: 130..186 e-value: 1.6E-6 score: 30.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..127
None	No IPR available	CDD	cd14686	bZIP	coord: 133..178 e-value: 2.58871E-8 score: 47.1549
None	No IPR available	SUPERFAMILY	57959	Leucine zipper domain	coord: 132..182
IPR004827	Basic-leucine zipper domain	PFAM	PF00170	bZIP_1	coord: 131..176 e-value: 3.2E-7 score: 30.3
IPR004827	Basic-leucine zipper domain	PROSITE	PS00036	BZIP_BASIC	coord: 136..150

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000235_pilon	contig	tig00000235_pilon:14605..15363 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra1279.t2	Ggra1279.t2	Gracilaria gracilis GNS1m male	mRNA	tig00000235_pilon 14605..15363 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra1279.t2 ID=Ggra1279.t2|Name=Ggra1279.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=253bp
MAPSPQSKARLRLHFLLQPSPPGADDCSAPLPSLSDLQRPLSSPPALPPP
RALSADSALPYASSPLCAHATLHSACASAPAPPALSRAVARAAATPMHSP
PRTPFPSGPSFAPTPPPPPPPPAAAPPRALDKRELRRMKNRISAARSRQR
KSDTFDSLTRELAEAKQVINALTVQLDRRNEAVVVAVPHDLRQVLGRDYV
SVDFLMDVLRGFVARGGGRDSGSGGGTAGGGAQDAAARSGATVSTRHAPL
LN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004827	bZIP