Ggra1277.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1277.t1
Unique NameGgra1277.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1098
Homology
The following BLAST results are available for this feature:
BLAST of Ggra1277.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.230.130Cullin; Chain C, Domain 2coord: 682..828
e-value: 9.3E-12
score: 46.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 913..1097
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1047..1097
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 913..929
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 930..1028
IPR016158Cullin homology domainPROSITEPS50069CULLIN_2coord: 693..767
score: 9.200208
IPR036317Cullin homology domain superfamilySUPERFAMILY75632Cullin homology domaincoord: 690..771

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000235_piloncontigtig00000235_pilon:6613..9906 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1277.t1Ggra1277.t1Gracilaria gracilis GNS1m malemRNAtig00000235_pilon 6613..9906 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1277.t1 ID=Ggra1277.t1|Name=Ggra1277.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1098bp
MEDSSDSLPLERQIAGFISSTAHHHSQSTAENQFNVPHQSDSDITSQLQR
LSVDGHERFDSQPMESQNQQNPPSEQEREQISKDIWDTVKESIQLFLALN
LDKTPSQRFQDEHNPTKRDSTIQIFCETVRASFEARHTTFQDAGVAFSAT
LTHEQDFDDKLKGLVQYIVPSLFTGIQLNEPGMSPDKDKKSLVEFHWKMQ
LWFLMRDMLHSFFHPYRSRNVHITHRLEVYQILDNFLHQGESFSRIVLNV
RTMHSELMNSMRILFYRTGRTSTSNDPDLVHAIQSFFYFLHLWGSKTMDN
TSGIVYYLSQLHQVCNDDLRSDISFQCEKQKACLENNSHFAYSIFQFILE
TVRCYREAEKFISLHAFGNQSIGECDIFLFLEDLKLHNHINRSISICSPD
PLIYRFNHGFTYDMFWWCRYMEGDKGMFVLLMLLENEFHPSYWKFFDNYW
RCTVSSKKLYSILPHLRRTLPAMKEFHHALVHSLWKAFLREYGVENPLSI
LTKVFLEVHRTLEFPEISRVLNKIVKPLAYLSKTMLSPSQRRNFIRHTRK
YQVERHLRGGKFSLRMISKWNNTFDLAFGNANMFFEKITFPADNKPPNMN
KLKRNELLHFWDDKHASPRNWDQWLPRLSRSTSRKEAWTTIDIEDRFQPY
IKHHTNDGSLHFGFPSKVIHLASLLAIESGTIDDECPLPLLRLPPELSLV
QSYAASHYKSIYPFRKISHFNHLSTVEVSTCFFSQSSNQPISFTVNLYQA
CVLKFFEQYQTASLEQIFAQLIVDDITEEQREQEKFRIRQAVVSLSTERA
PMVMWEEDGEGSERCFGLNENWSPSRLPKFVLLFDNAFISCLDEKAERRI
RGSVEEDILRIYSKGRKDKLMTLKYLTKMASARVRYECVGFQYVQSCVER
LIDKGRIDVNSPSFGSSNSDIGSKDSGDSSRGGSSDEDYDEYSEEYSHKD
SDEHLEDDFYEHSDGHSDQDSDGHSDQDSDGHSGQDSDGHSDRDSDGHSD
QDSDGHSDQVSDGHSDRDSDRHSDESSDEGPYAYQQVHVGPHAGEGDDES
DEYEGDYDEEGSEYGEDESESDEDDFVSDGYDDEYSDEGMNEDTDEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016158Cullin_homology
IPR036317Cullin_homology_sf