Ggra1276.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1276.t1
Unique NameGgra1276.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length158
Homology
The following BLAST results are available for this feature:
BLAST of Ggra1276.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 156..157
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..157
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableTMHMMTMhelixcoord: 5..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000235_piloncontigtig00000235_pilon:3027..4360 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1276.t1Ggra1276.t1Gracilaria gracilis GNS1m malemRNAtig00000235_pilon 3027..4360 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1276.t1 ID=Ggra1276.t1|Name=Ggra1276.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=158bp
MKIICLFILAVAAVLYSAVGMAIPKKNSMISSSHKSEMATVHGMEVDAAV
RDWDDDNDDGWGDDDGRKYYQPRYWNPYWAYYYPLLETPVFLREPVVPPS
LDGVSLWIAHAFTSSITSVLSFDLFYCVSCDVIHTILVLSRNTALLSKLI
YVPRPQD*
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