Ggra1275.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1275.t1
Unique NameGgra1275.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length171
Homology
BLAST of Ggra1275.t1 vs. uniprot
Match: A0A350XE39 (CAP domain-containing protein n=2 Tax=unclassified Cyanobacteria TaxID=1983111 RepID=A0A350XE39_9CYAN)

HSP 1 Score: 108 bits (271), Expect = 6.640e-27
Identity = 59/131 (45.04%), Postives = 76/131 (58.02%), Query Frame = 0
Query:   36 QDMYRRRLLRLTNEQRARYGISPVRLDSKLNVAASKHNADLAFKQIRLSHIGFDGARLGVRVRRVGYSFVWAAENLARGQKNPMHAVSSWMKSPGHRRNLLNAKATHMGVHVGRGRNGQL--YWAQVFGRP 164
            Q  +  +LL+LTNEQR R G+ P+RL SKL  AA  H  D+A   I  SH G +G+ +  RV++VGYS+    EN+A G   P   +  WM SPGHRRN+LN   T +G       N +   YW QVFG P
Sbjct:   44 QSRFDAQLLQLTNEQRRRAGLQPLRLSSKLGQAAQSHAQDMAQNNI-FSHTGSNGSTMVDRVKKVGYSYSTVGENIAAGGATPAATIQQWMNSPGHRRNILNPSFTEIGFGYVAAPNTEYRHYWVQVFGSP 173          
BLAST of Ggra1275.t1 vs. uniprot
Match: CAP domain-containing protein n=1 Tax=Microseira wollei TaxID=467598 RepID=UPI001CFC9B1F (CAP domain-containing protein n=1 Tax=Microseira wollei TaxID=467598 RepID=UPI001CFC9B1F)

HSP 1 Score: 108 bits (271), Expect = 6.640e-27
Identity = 59/131 (45.04%), Postives = 76/131 (58.02%), Query Frame = 0
Query:   36 QDMYRRRLLRLTNEQRARYGISPVRLDSKLNVAASKHNADLAFKQIRLSHIGFDGARLGVRVRRVGYSFVWAAENLARGQKNPMHAVSSWMKSPGHRRNLLNAKATHMGVHVGRGRNGQL--YWAQVFGRP 164
            Q  +  +LL+LTNEQR R G+ P+RL SKL  AA  H  D+A   I  SH G +G+ +  RV++VGYS+    EN+A G   P   +  WM SPGHRRN+LN   T +G       N +   YW QVFG P
Sbjct:   44 QSRFDAQLLQLTNEQRRRAGLQPLRLSSKLGQAAQSHAQDMAQNNI-FSHTGSNGSTMVDRVKKVGYSYSTVGENIAAGGATPAATIQQWMNSPGHRRNILNPSFTEIGFGYVSAPNTEYGHYWVQVFGSP 173          
BLAST of Ggra1275.t1 vs. uniprot
Match: A0A370I8G4 (Cysteine-rich secretory family protein n=2 Tax=Nocardia pseudobrasiliensis TaxID=45979 RepID=A0A370I8G4_9NOCA)

HSP 1 Score: 104 bits (259), Expect = 3.210e-25
Identity = 57/125 (45.60%), Postives = 75/125 (60.00%), Query Frame = 0
Query:   46 LTNEQRARYGISPVRLDSKLNVAASKHNADLAFKQIRLSHIGFDGARLGVRVRRVGYSFVWAAENLARGQKNPMHAVSSWMKSPGHRRNLLNAKATHMGVHVGRGRNGQLYWAQVFGRPTPIVRS 170
            LTN QRA+ G   +R D++L  AA  H++D+A + + LSH    G   G R+R VGYS    AEN+A GQ+ P   V +WM+SPGHR N+LN     +GV + +GRNG  YW Q FG   P   S
Sbjct:   45 LTNAQRAKAGCPALRADTRLTRAAQAHSSDMAARGV-LSHNSSAGDP-GARIRAVGYSARGWAENIASGQRGPSEVVDAWMRSPGHRANILNCGLRDIGVGLAQGRNGTPYWTQDFGISNPSRAS 167          
BLAST of Ggra1275.t1 vs. uniprot
Match: A0A8J4EFJ0 (Uncharacterized protein n=1 Tax=Virgisporangium ochraceum TaxID=65505 RepID=A0A8J4EFJ0_9ACTN)

HSP 1 Score: 102 bits (254), Expect = 1.670e-24
Identity = 51/121 (42.15%), Postives = 78/121 (64.46%), Query Frame = 0
Query:   42 RLLRLTNEQRARYGISPVRLDSKLNVAASKHNADLAFKQIRLSHIGFDGARLGVRVRRVGYSFVWAAENLARGQKNPMHAVSSWMKSPGHRRNLLNAKATHMGVHVGRGRNGQLYWAQVFG 162
            R+++LTN+ R + G + +R ++KL  AA  H+AD+  K    SH G DG+   VR +R GY+   +AEN+A G + P   V++WMKSPGH+ N+LN K+  +GV + +  +G  YW Q+FG
Sbjct:   44 RVVKLTNDNRVKNGCAALRTEAKLTTAARAHSADMVAKNY-FSHTGKDGSTFLVRAKRAGYTTA-SAENIAWGYRTPEAVVTAWMKSPGHKANILNCKSKSVGVGLAKKADGTPYWTQMFG 162          
BLAST of Ggra1275.t1 vs. uniprot
Match: A0A1H3N0U1 (Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain n=1 Tax=Micromonospora pattaloongensis TaxID=405436 RepID=A0A1H3N0U1_9ACTN)

HSP 1 Score: 100 bits (249), Expect = 8.660e-24
Identity = 56/121 (46.28%), Postives = 74/121 (61.16%), Query Frame = 0
Query:   43 LLRLTNEQRARYGISPVRLDSKLNVAASKHNADLAFKQIRLSHIGFDGARLGVRVRRVGYSFVWAAENLARGQKNPMHAVSSWMKSPGHRRNLLNAKATHMGVHVGRGRNGQLYWAQVFGR 163
            L +LTN  RA++G  PVR D++L  AA  H AD+  K    SH G DG+R   R +R GY+    +EN+A G ++     ++ MKSPGHRRN+LN  A  +GV VGR  +G L W Q FGR
Sbjct:   42 LAKLTNATRAQHGCKPVRGDARLRKAARAHTADMIRKNF-FSHRGSDGSRFTTRAKRAGYTPA-LSENIAWGYRSANEVFTALMKSPGHRRNILNCSAKAVGVGVGRKADGTLMWTQDFGR 160          
BLAST of Ggra1275.t1 vs. uniprot
Match: A0A1Z4N262 (SCP-like extracellular n=3 Tax=Nostocales TaxID=1161 RepID=A0A1Z4N262_9CYAN)

HSP 1 Score: 100 bits (250), Expect = 9.770e-24
Identity = 52/122 (42.62%), Postives = 77/122 (63.11%), Query Frame = 0
Query:   43 LLRLTNEQRARYGISPVRLDSKLNVAASKHNADLAFKQIRLSHIGFDGARLGVRVRRVGYSFVWAAENLARGQKNPMHAVSSWMKSPGHRRNLLNAKATHMGVHV--GRGRNGQLYWAQVFG 162
            ++ + N +R R G+SP+R+ S+LN +A  H+ D+A     +SH G DG+ +G R++R GY++  A EN+A GQ++P   + SWM S GHR+N+LN     +GV    G GR G  YW Q FG
Sbjct:   59 VVNIVNHERGRAGLSPLRMHSQLNASAQAHSNDMARNDF-MSHSGSDGSSMGDRIKRYGYNYRTAGENVAAGQRSPQDVMRSWMNSSGHRQNILNPNFRDIGVGYAQGGGRFGT-YWTQNFG 178          
BLAST of Ggra1275.t1 vs. uniprot
Match: A0A6I1EA64 (CAP domain-containing protein n=2 Tax=Amylibacter sp. SFDW26 TaxID=2652722 RepID=A0A6I1EA64_9RHOB)

HSP 1 Score: 99.4 bits (246), Expect = 1.120e-23
Identity = 59/136 (43.38%), Postives = 74/136 (54.41%), Query Frame = 0
Query:   29 PRQAGALQDMYRRRLLRLTNEQRARYGISPVRLDSKLNVAASKHNADLAFKQIRLSHIGFDGARLGVRVRRVGYSFVWAAENLARGQKNPMHAVSSWMKSPGHRRNLLNAKATHMGVHVGRGRNGQLYWAQVFGRP 164
            P  A  +QD     L  L N +R   G   +R+   LNV A KH  D+       SH G DG+ LG R++R GY F +AAEN+A GQK P   +SSW  SPGH +N L+ K+T     VG G  GQ  W  VFG+P
Sbjct:    6 PSYADEVQD-----LTTLLNAERKAKGRKVLRVSDTLNVIAQKHAEDMVANGY-FSHTGRDGSTLGKRMKRQGYKFCYAAENIASGQKTPEETMSSWRNSPGHNKNNLSRKSTE----VGAGFAGQSMWVLVFGKP 131          
BLAST of Ggra1275.t1 vs. uniprot
Match: A0A846FGP4 (CAP domain-containing protein n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FGP4_9CYAN)

HSP 1 Score: 101 bits (252), Expect = 1.120e-23
Identity = 55/130 (42.31%), Postives = 75/130 (57.69%), Query Frame = 0
Query:   36 QDMYRRRLLRLTNEQRARYGISPVRLDSKLNVAASKHNADLAFKQIRLSHIGFDGARLGVRVRRVGYSFVWAAENLARGQKNPMHAVSSWMKSPGHRRNLLNAKATHMGV-HVGRGRNG-QLYWAQVFGR 163
            +  Y   LLRLTN +R R G+ P+RL ++LN  A  H  D+  K    SH+G DG+R+  R + +GY+F +  ENLA G  +P   +  WM SPGHR N+LN     +G  +VG      + YW QVFGR
Sbjct:   79 RSRYEDELLRLTNIERRRVGLPPLRLSAQLNQVARLHAQDMV-KNNFFSHVGSDGSRVSDRAKAIGYAFSYIGENLAAGNPSPAQTLRQWMNSPGHRANILNPDYREIGFGYVGNAATPYRHYWVQVFGR 207          
BLAST of Ggra1275.t1 vs. uniprot
Match: A0A251WFA2 (SCP domain-containing protein n=1 Tax=Alkalinema sp. CACIAM 70d TaxID=1934309 RepID=A0A251WFA2_9CYAN)

HSP 1 Score: 98.2 bits (243), Expect = 3.520e-23
Identity = 55/133 (41.35%), Postives = 75/133 (56.39%), Query Frame = 0
Query:   32 AGALQDMYRRRLLRLTNEQRARYGISPVRLDSKLNVAASKHNADLAFKQIRLSHIGFDGARLGVRVRRVGYSFVWAAENLARGQKNPMHAVSSWMKSPGHRRNLLNAKATHMGVHVGRGRNGQL--YWAQVFG 162
            A A    ++  LLRLTN +R + G++P++L S LN AA  H  D+  KQ   SH G +G+ +  RV+ VGY + +  EN+A G       +  WMKSPGHR N+LN     +G    +  N Q   YWAQVFG
Sbjct:    3 AAATSADFQTELLRLTNAERKKAGLAPLKLSSLLNQAAQSHVQDMVQKQF-FSHTGSNGSSVADRVKAVGYKYSYVGENIAAGNAAASSTIQQWMKSPGHRANILNRNFKEIGFGYAQS-NDQYGHYWAQVFG 133          
BLAST of Ggra1275.t1 vs. uniprot
Match: A0A1B7W992 (SCP domain-containing protein n=4 Tax=Nostocales TaxID=1161 RepID=A0A1B7W992_9NOST)

HSP 1 Score: 97.4 bits (241), Expect = 5.190e-23
Identity = 53/126 (42.06%), Postives = 75/126 (59.52%), Query Frame = 0
Query:   37 DMYRRRLLRLTNEQRARYGISPVRLDSKLNVAASKHNADLAFKQIRLSHIGFDGARLGVRVRRVGYSFVWAAENLARGQKNPMHAVSSWMKSPGHRRNLLNAKATHMGVHVGRGRNGQLYWAQVFG 162
            D+  +R+  L N +R R G+S +RL+SKL  AA  H+ D+A +  RLSH G DG+ +  R+RR GY + WA EN+A GQ +    + SWM S GHR+N+L+     +G+    G     YW Q FG
Sbjct:    2 DVEIQRVFDLLNNERFRAGLSLLRLNSKLIAAAQAHSNDMA-RYNRLSHTGSDGSSMVDRMRRYGYKYRWAGENIAYGQTSAQEVMQSWMNSAGHRQNILDPNFRDVGIAYAYGNT--FYWTQNFG 124          
The following BLAST results are available for this feature:
BLAST of Ggra1275.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A350XE396.640e-2745.04CAP domain-containing protein n=2 Tax=unclassified... [more]
CAP domain-containing protein n=1 Tax=Microseira wollei TaxID=467598 RepID=UPI001CFC9B1F6.640e-2745.04CAP domain-containing protein n=1 Tax=Microseira w... [more]
A0A370I8G43.210e-2545.60Cysteine-rich secretory family protein n=2 Tax=Noc... [more]
A0A8J4EFJ01.670e-2442.15Uncharacterized protein n=1 Tax=Virgisporangium oc... [more]
A0A1H3N0U18.660e-2446.28Uncharacterized conserved protein YkwD, contains C... [more]
A0A1Z4N2629.770e-2442.62SCP-like extracellular n=3 Tax=Nostocales TaxID=11... [more]
A0A6I1EA641.120e-2343.38CAP domain-containing protein n=2 Tax=Amylibacter ... [more]
A0A846FGP41.120e-2342.31CAP domain-containing protein n=1 Tax=Cyanothece s... [more]
A0A251WFA23.520e-2341.35SCP domain-containing protein n=1 Tax=Alkalinema s... [more]
A0A1B7W9925.190e-2342.06SCP domain-containing protein n=4 Tax=Nostocales T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014044CAP domainPFAMPF00188CAPcoord: 44..161
e-value: 1.4E-17
score: 64.7
IPR035940CAP superfamilyGENE3D3.40.33.10CAPcoord: 16..162
e-value: 1.3E-37
score: 132.0
IPR035940CAP superfamilySUPERFAMILY55797PR-1-likecoord: 39..167
NoneNo IPR availablePANTHERPTHR31157:SF1PROTEIN, PUTATIVE-RELATEDcoord: 35..163
NoneNo IPR availablePANTHERPTHR31157UNCHARACTERIZEDcoord: 35..163
NoneNo IPR availableCDDcd05379CAP_bacterialcoord: 40..162
e-value: 8.28698E-35
score: 116.325

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000235_piloncontigtig00000235_pilon:2481..2993 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1275.t1Ggra1275.t1Gracilaria gracilis GNS1m malemRNAtig00000235_pilon 2481..2993 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1275.t1 ID=Ggra1275.t1|Name=Ggra1275.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=171bp
MQPKPQVLAARQAGCRTCAPNQLTHVRLPRQAGALQDMYRRRLLRLTNEQ
RARYGISPVRLDSKLNVAASKHNADLAFKQIRLSHIGFDGARLGVRVRRV
GYSFVWAAENLARGQKNPMHAVSSWMKSPGHRRNLLNAKATHMGVHVGRG
RNGQLYWAQVFGRPTPIVRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014044CAP_domain
IPR035940CAP_sf