Ggra1263.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1263.t1
Unique NameGgra1263.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length492
Homology
BLAST of Ggra1263.t1 vs. uniprot
Match: R7QKF5 (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QKF5_CHOCR)

HSP 1 Score: 130 bits (328), Expect = 1.490e-28
Identity = 79/232 (34.05%), Postives = 125/232 (53.88%), Query Frame = 0
Query:  245 SMKVMQILSQVQEVTLLQSEDPGWFLARGFRYTSRTTQSFLRTLSENHEDNIEALAFLIKEKQIDYRLVTFPQGEEELKQCLMSKLIIFSRSMNMQLSCHHTLDEQEHAISSLMSSTAESLQAKTKNEILSILSAVGCRQPQSLLKRQLIEKTLELKCSVQNGTVQLALPSMQSMSAAQRVEVKKEKLLEALYKTSLTSWVMKPLVSTPGMKEGNVNESQVLKALPLFFEKS 476
            S +V Q L++++ +T  QSEDP WFL R FR+TSRT  SFL T++ + E+++ +LA+ ++ KQ+     T PQ     +Q L  K     +   M+L       E+      L   +   +    +N++  +L         +  K  L+   L+L+  +  GTV+L      S+S +  +  +  K+L+ L + SL +WVMKPLVST GMKEG+ NE +VLKA+P F  K+
Sbjct:  621 SNQVDQALARIKILTFNQSEDPVWFLLRAFRFTSRTGHSFLATVTRDFENHVSSLAWALRGKQLAVGSDTLPQDHSSCEQLLRVKWECVCKLFGMRLGAEPQPSERRDLALRLERYSRSRINLFNRNDLQQMLGGFARGLSGAPSKTVLVNAVLQLQADIGAGTVELDDDGADSVSLSASLTERASKILQKLREASLHAWVMKPLVSTAGMKEGSRNEIEVLKAIPSFLSKT 852          
BLAST of Ggra1263.t1 vs. uniprot
Match: A0A2V3IVJ7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVJ7_9FLOR)

HSP 1 Score: 112 bits (280), Expect = 1.610e-24
Identity = 69/196 (35.20%), Postives = 110/196 (56.12%), Query Frame = 0
Query:  237 GGTGKSIASMKVMQILSQVQEVTLLQSEDPGWFLARGFRYTSRTTQSFLRTLSENHEDNIEALAFLIKEKQIDYRLVTFPQGEEELKQCLMSKLIIFSRSMNMQLSCHHTLDEQEHAISSLMSSTAESLQAKTKNEILSILSAVGCRQPQSLLKRQLIEKTLELKCSVQNGTVQLALPSMQSMSAAQRVEVKKEKL 432
            G  G  +A  KV Q++S+V EV  LQS+DPGWFLAR F++TS+TT +F+R  + N E N+ ALA ++K K   Y    FP    E    L  +L      +N+ LS   + +E +   + L+S+   +L A TK E+++ +S +G     +L + Q++EK L  +  VQ G V +     + +SA ++V   K+K+
Sbjct:   36 GTYGLYLARYKVGQVVSEVFEVIALQSQDPGWFLARAFQFTSQTTSNFIRARAHNFEINVRALADIVKGKSTGYGNSHFPDTTIESLTRLELRLKNVCEVLNVSLSTAPSENEFDQMKTFLVSAETNALNAMTKAELVAAMSRIGHPVSSTLRRAQIVEKILLFQQQVQTGEVVMVENEAEELSAEEQVIAAKKKI 231          
BLAST of Ggra1263.t1 vs. uniprot
Match: A0A2V3IP41 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP41_9FLOR)

HSP 1 Score: 103 bits (256), Expect = 2.200e-22
Identity = 57/122 (46.72%), Postives = 78/122 (63.93%), Query Frame = 0
Query:  357 LMSSTAESLQAKTKNEILSILSAVGCRQPQSLLKRQLIEKTLELKCSVQNGTVQLALPSMQSMSAAQRVEVKKEKLLEALYKTSLTSWVMKPLVSTPGMKEGNVNESQVLKALPLFFEKSSV 478
            L+S+   SL AKTK ++++ +S +G     +L K Q++EK L  +  VQ G + L    ++ +SA + V   K+KLLE LYK SL SWVMKPLVST GMKEG  NE QVL+ LP  F+  +V
Sbjct:    5 LVSAETNSLNAKTKAKLVAAMSRIGHPVSSTLRKAQIVEKILVFRQQVQTGELLLVENEVEELSAEEEVIAAKKKLLEVLYKRSLDSWVMKPLVSTVGMKEGLFNEKQVLRELPTLFDSHNV 126          
BLAST of Ggra1263.t1 vs. uniprot
Match: A0A2V3ITK4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITK4_9FLOR)

HSP 1 Score: 92.0 bits (227), Expect = 2.540e-17
Identity = 53/122 (43.44%), Postives = 75/122 (61.48%), Query Frame = 0
Query:  357 LMSSTAESLQAKTKNEILSILSAVGCRQPQSLLKRQLIEKTLELKCSVQNGTVQLALPSMQSMSAAQRVEVKKEKLLEALYKTSLTSWVMKPLVSTPGMKEGNVNESQVLKALPLFFEKSSV 478
            L+S+   +   KTK E+++ +S +G     +  K +++EK L     VQ G V L     + ++A ++V   K+KLLE LYK SL SWVMKPLVST GMKEG++NE QVL  L  FF+  +V
Sbjct:    5 LVSAETNTPNEKTKTELVAGMSRIGHPISSTQRKGEIVEKILLFLKQVQTGEVVLVENEAEELTAEEQVIAAKKKLLEVLYKRSLNSWVMKPLVSTVGMKEGSLNEKQVLIELSTFFDSHNV 126          
BLAST of Ggra1263.t1 vs. uniprot
Match: R7QIE1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIE1_CHOCR)

HSP 1 Score: 84.0 bits (206), Expect = 1.290e-14
Identity = 48/139 (34.53%), Postives = 80/139 (57.55%), Query Frame = 0
Query:  244 ASMKVMQILSQVQEVTLLQSEDPGWFLARGFRYTSRTTQSFLRTLSENHEDNIEALAFLIKEKQIDYRLVTFPQGEEELKQCLMSKLIIFSRSMNMQL-SCHHTLDEQEHAISSLMSSTAESLQAKTKNEILSILSAVG 381
            A +KV+Q+L  + + T+LQSEDPGWFL R F++TSRT+ +F+  ++ N+  NI  L+FL++ K++           + L++ L+ K    S ++ +        L   E  I   MS TA SL  + K+E+LS+ + +G
Sbjct:  109 AVLKVLQLLGHLLQFTILQSEDPGWFLGRAFKFTSRTSNNFIGAIARNYICNIAGLSFLLRGKRLRAGFEPLTSDLKNLEKDLLEKWTSLSTTIGISSREMEQPLTHSEAEI--FMSETASSLAQRRKDELLSLSALLG 245          
The following BLAST results are available for this feature:
BLAST of Ggra1263.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
R7QKF51.490e-2834.05Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
A0A2V3IVJ71.610e-2435.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IP412.200e-2246.72Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITK42.540e-1743.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QIE11.290e-1434.53Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 193..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000208_piloncontigtig00000208_pilon:68678..71356 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1263.t1Ggra1263.t1Gracilaria gracilis GNS1m malemRNAtig00000208_pilon 68678..71356 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1263.t1 ID=Ggra1263.t1|Name=Ggra1263.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=492bp
MAHRTPSKTRSLQIDTSPPSPSGESVSLKRLSSDQTDLYEDTVETPLSLP
GLNENSDEHGHQNAKDDVQNDSTLAQTAHNGSKSPSHSQISNNSADQNMS
FSFDSEGEETDSVYNPQNKEGNNEENDSSYSQSKISDQNQTVSEVELRQL
VMDNFMNYPEAGVTTSNSINARQVTVEDMWSSLFCEDYSLDSLHSAEKTD
NEAQREADEARASVDGLDDWEYASVSENGTESNLSAGGTGKSIASMKVMQ
ILSQVQEVTLLQSEDPGWFLARGFRYTSRTTQSFLRTLSENHEDNIEALA
FLIKEKQIDYRLVTFPQGEEELKQCLMSKLIIFSRSMNMQLSCHHTLDEQ
EHAISSLMSSTAESLQAKTKNEILSILSAVGCRQPQSLLKRQLIEKTLEL
KCSVQNGTVQLALPSMQSMSAAQRVEVKKEKLLEALYKTSLTSWVMKPLV
STPGMKEGNVNESQVLKALPLFFEKSSVVDGDCLRSRQLSY*
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