Ggra1258.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1258.t1
Unique NameGgra1258.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length322
Homology
BLAST of Ggra1258.t1 vs. uniprot
Match: A0A2V3J5L1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5L1_9FLOR)

HSP 1 Score: 427 bits (1098), Expect = 7.190e-148
Identity = 204/317 (64.35%), Postives = 245/317 (77.29%), Query Frame = 0
Query:    5 VSQSSVCPRRPARPRPHRRVSIATYATTPTPETQNLKQQLEAILDAIPTFLDTATGRVERAVASIPDQVKYLFSDEGPLGVLNFWRENKDNISSTGQQLLESGERLVKGDTDGFREKASGINLSWLRPLRRSSPSEGADDDVIVGSQVRKTLFFLIDSLTPWDFDRHDFGLTFVTIWNDVEALKQADVNVATLKMTSTIKPIEQEWKLSARGKLFDLGENTAVFGKAGLYLAGDSPAYIGAEADRVWPIPRLPGTKLFANVNYRSSRKPQKDPIKMTCGIEQDFAIAKGVDLTLRLAFNIIENMGISIYPVPNGSYF 321
            +++ ++ PRRPA       +S   YATT + E   L++QLE IL++IP FLD  T +VE AVA IP++V+YLFS+EGPLG LNFWRENK+NI+STGQQLLESGE LVKGD DGFR+KASGI+ SWL+P R S    G      V  QV+ T  FLI+SLTPWDFDRHDFGLTFVT+WND++  K+   N A +KM STIKP+ QEWKL+AR KL DLGEN  VFGKAG+YLAG+ PAYIG EADRVW IPRLPGT LF NVNYRSSRKPQ DPI+ T GI+QDF +AKG+DLTLRLAFN ++   I++ P+PNGSYF
Sbjct:    1 MAKLAISPRRPASCHGPIPISFVPYATTISSERTTLREQLEKILESIPAFLDKTTNKVEEAVAGIPERVQYLFSEEGPLGALNFWRENKENITSTGQQLLESGELLVKGDADGFRDKASGIDFSWLKPTRVSEQENGKRHRRTVADQVQNTCLFLIESLTPWDFDRHDFGLTFVTVWNDLDTFKREGANEAIVKMASTIKPLYQEWKLTARTKLIDLGENATVFGKAGMYLAGNKPAYIGLEADRVWQIPRLPGTMLFVNVNYRSSRKPQADPIRTTVGIQQDFTVAKGIDLTLRLAFNPLDRHDITVTPIPNGSYF 317          
BLAST of Ggra1258.t1 vs. uniprot
Match: A0A1X6PE08 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PE08_PORUM)

HSP 1 Score: 114 bits (285), Expect = 1.720e-24
Identity = 61/169 (36.09%), Postives = 94/169 (55.62%), Query Frame = 0
Query:  158 FLIDSLTPWDFDRHDFGLTFVTIWNDVEA----LKQADVNVATLKMTSTIKPIEQEWKLSARGKLFDLGENTAVFGKAGLYLAGDSPAYIGAEADRVWPIPRLPGTKLFANVNYRSSRKPQK-DPIKMTCGIEQDFAIAKGVDLTLRLAFNIIENMGISIYPVPNGSYF 321
            +++    PWD DRH F  TF   W+   A       A ++   LK+TST KP+ QEWKL+ R  +    +   V GKAG+YL G+   Y+G E D+V  +P+L GT +FAN N+RS+R  +K D +  + G++Q + +     LT+R+ +        ++ P+P G YF
Sbjct:  560 YVLTHFWPWDHDRHYFAPTFWHQWSYHRAEGGTKASAGLHKLPLKITSTYKPLTQEWKLTTRVNMLPRLQLCQVIGKAGMYLKGEGAPYVGVELDKVVSVPKLKGTGVFANANWRSTRSEEKVDDVVASAGVQQTYKVGGLPPLTIRVGYTSRNEW--TVTPIPWGHYF 726          
The following BLAST results are available for this feature:
BLAST of Ggra1258.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J5L17.190e-14864.35Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6PE081.720e-2436.09Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000208_piloncontigtig00000208_pilon:42239..43204 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1258.t1Ggra1258.t1Gracilaria gracilis GNS1m malemRNAtig00000208_pilon 42239..43204 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1258.t1 ID=Ggra1258.t1|Name=Ggra1258.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=322bp
MSVIVSQSSVCPRRPARPRPHRRVSIATYATTPTPETQNLKQQLEAILDA
IPTFLDTATGRVERAVASIPDQVKYLFSDEGPLGVLNFWRENKDNISSTG
QQLLESGERLVKGDTDGFREKASGINLSWLRPLRRSSPSEGADDDVIVGS
QVRKTLFFLIDSLTPWDFDRHDFGLTFVTIWNDVEALKQADVNVATLKMT
STIKPIEQEWKLSARGKLFDLGENTAVFGKAGLYLAGDSPAYIGAEADRV
WPIPRLPGTKLFANVNYRSSRKPQKDPIKMTCGIEQDFAIAKGVDLTLRL
AFNIIENMGISIYPVPNGSYF*
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