Ggra1257.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1257.t1
Unique NameGgra1257.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length558
Homology
BLAST of Ggra1257.t1 vs. uniprot
Match: A0A2V3IHF9 (Double homeobox protein 4C n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHF9_9FLOR)

HSP 1 Score: 445 bits (1144), Expect = 8.630e-150
Identity = 268/401 (66.83%), Postives = 296/401 (73.82%), Query Frame = 0
Query:    1 MAHHQPQPPKLSNV-APPLLPPPSQXXXXXXXXTPDLSAPLATASTPTLGATALLVTASPTTXXXXXXXXXXXXXXXXXXAAA-PVTLSAPPLSQPTHSKWRVTPAQKEVLLKAFDEEPYPELHKKNTLAHQLGVTTAQISKWFQHRREHLTRLGQFKAQYNRTRRTPEELDVLQAAFDADRYPTAERLQQLANQLQGVTPKQIKLWFKHRRKQDQKRRRSNTSPISLRSSPTLPSHAVQPGLRSMRPVDLSASSHDSTRPDWRTTLPTNLVPNVQQCQQL------------------------PHPTLIQTPSASNVPYSFDAHHYYPY-KQPQFLVSPSQSPFSRSELLALQAVQTVLISTPSPDAITKLAQLLNKPQDAIRDWFRAQDNIRMSEPTA 374
            MAHHQPQ  KLS+    P LPP S         TP+ SAPLA+ASTPT GA ALLVTASPTT     XXXXXXXXXXXXX  A PV L+A PL QPTHSKWRVTPAQK+VLLKAFDE+PYPEL KKN LA QLGVTT QISKWFQHRREHLTRLGQFKAQYNRTRRTPEELDVLQAAFDA+RYP +ERLQQLA QLQGVTPKQIKLWFKHRRKQDQKR+R+N+SPISLRSS +LP H+  P L SM P D+S+SS D  R DWR+ +PTNLVPNVQQ                            PH  L+Q P  + VPY+FD H YYPY K  QF+V+ SQS FSR E LALQA   VL +TP PDAI ++AQLLN+P DA+RDWFRAQ+N     PTA
Sbjct:    7 MAHHQPQSNKLSHPHLLPSLPPHSHPSPLQLPTTPEFSAPLASASTPTFGAAALLVTASPTTPALSTXXXXXXXXXXXXXXPANPVALTAQPLPQPTHSKWRVTPAQKDVLLKAFDEQPYPELLKKNALARQLGVTTPQISKWFQHRREHLTRLGQFKAQYNRTRRTPEELDVLQAAFDAERYPNSERLQQLAAQLQGVTPKQIKLWFKHRRKQDQKRKRANSSPISLRSSASLPDHSAYPSLPSMHPPDVSSSSQDPMRSDWRSNIPTNLVPNVQQAPXXXXXXXXXXXXXXXXXXXXXXXXXXPHAALMQAPPTTAVPYTFDPHGYYPYTKSSQFIVA-SQSSFSRMEHLALQAAFAVLNATPPPDAIARIAQLLNRPYDAVRDWFRAQENC----PTA 402          
BLAST of Ggra1257.t1 vs. uniprot
Match: A0A7S1EPD8 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EPD8_9RHOD)

HSP 1 Score: 118 bits (296), Expect = 3.720e-26
Identity = 53/114 (46.49%), Postives = 81/114 (71.05%), Query Frame = 0
Query:   97 SKWRVTPAQKEVLLKAFDEEPYPELHKKNTLAHQLGVTTAQISKWFQHRREHLTRLGQFKAQYNRTRRTPEELDVLQAAFDADRYPTAERLQQLANQLQGVTPKQIKLWFKHRR 210
            ++W+ T  Q+ +L++ FD+EPYP +  K  LA ++GV   QI+KWFQHRRE L++ G+F+ Q  R RRTP+EL VLQ AF+   YP+A+ +Q +  +L  ++  Q++LWFKH+R
Sbjct:   37 NRWKPTELQRSMLMEEFDKEPYPSVEYKGELASRIGVKRQQIAKWFQHRRESLSKAGKFEGQKQRDRRTPQELHVLQDAFNISPYPSADEIQNIVLKLPSLSEAQVRLWFKHKR 150          
BLAST of Ggra1257.t1 vs. uniprot
Match: A0A7S1EU41 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EU41_9RHOD)

HSP 1 Score: 122 bits (307), Expect = 5.230e-26
Identity = 63/132 (47.73%), Postives = 86/132 (65.15%), Query Frame = 0
Query:   97 SKWRVTPAQKEVLLKAFDEEPYPELHKKNTLAHQLGVTTAQISKWFQHRREHLTRLGQFKAQYNRTRRTPEELDVLQAAFDADRYPTAERLQQLANQLQGVTPKQIKLWFKHRRKQDQKRRRSNTSPISLRS 228
            ++W+ TPAQ+  LLK F+E PYPE+  K  LA  L +  AQISKWFQHRRE L + G+F  Q  R RRTPEEL++L++AF    YP  + +  L  +L  + P+Q+KLWFKH+R    +  RS++   S RS
Sbjct:   16 ARWKPTPAQRATLLKEFEENPYPEIETKLRLAQSLDLRHAQISKWFQHRREALVKKGRFSGQKRRDRRTPEELEILESAFAECAYPKTKDVDCLCTRLPDMQPQQVKLWFKHKRMSIARMIRSSSGRGSERS 147          
BLAST of Ggra1257.t1 vs. uniprot
Match: A0A7S1THT7 (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1THT7_9RHOD)

HSP 1 Score: 105 bits (262), Expect = 1.100e-21
Identity = 52/115 (45.22%), Postives = 78/115 (67.83%), Query Frame = 0
Query:   97 SKWRVTPAQKEVLLKAFDEEPYPELHKKNTLAHQLGVTTAQISKWFQHRREHLTRLGQF-KAQYNRTRRTPEELDVLQAAFDADRYPTAERLQQLANQLQGVTPKQIKLWFKHRR 210
            S+W+ T A+K +L ++++++PYP   +K  LA+QLGV   QISKWFQH+RE + + GQ  +A   + RRT EEL++L  AF+ + YPT   + +L  ++  +T  Q KLWFKHRR
Sbjct:   55 SRWKPTMAEKVILSESYEQQPYPSPEEKLKLANQLGVKKKQISKWFQHKRESMAKAGQLPEAVKQKDRRTHEELEILLQAFEENPYPTTSDVDELVKKIGTMTVPQTKLWFKHRR 169          
BLAST of Ggra1257.t1 vs. uniprot
Match: A0A7S3A1E6 (Hypothetical protein (Fragment) n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A1E6_9RHOD)

HSP 1 Score: 107 bits (268), Expect = 4.190e-21
Identity = 56/115 (48.70%), Postives = 75/115 (65.22%), Query Frame = 0
Query:   97 SKWRVTPAQKEVLLKAFDEEPYPELHKKNTLAHQLGVTTAQISKWFQHRREHLTRLGQFKAQYNRTRRTPEELDVLQAAFDADRYPTAERLQQLANQLQG-VTPKQIKLWFKHRR 210
            ++W+ +  QK  L+  F E  YP+   K  LA QL V  AQ+SKWFQH+RE L++LG F  Q  R RRT E+L VLQ A D   YPTAE+++ +  +  G +T KQ+KLWFKH+R
Sbjct:   21 TRWKPSEEQKGWLMGQFQENAYPDTDTKARLAAQLRVKRAQVSKWFQHKRESLSKLGHFNPQKQRERRTKEQLAVLQQALDRHPYPTAEQVEDVLRRTGGSMTAKQVKLWFKHKR 135          
BLAST of Ggra1257.t1 vs. uniprot
Match: A0A5J4Z290 (Double homeobox protein 4C n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z290_PORPP)

HSP 1 Score: 105 bits (262), Expect = 4.630e-20
Identity = 85/322 (26.40%), Postives = 140/322 (43.48%), Query Frame = 0
Query:   97 SKWRVTPAQKEVLLKAFDEEPYPELHKKNTLAHQLGVTTAQISKWFQHRREHLTRLGQFKAQYNRTRRTPEELDVLQAAFDADRYPTAERLQQLANQLQGVTPKQIKLWFKHRRKQDQKRRRSNTSPISLRSSPTLPSHAVQPGLRSMRPVDLSASSHDSTRPDWRTTLPTNLVPNVQ-------QCQQLP-HPTLIQTPSASNVPYSFDAHHYYPYKQPQFLVSPSQSPFSRSELLALQAVQTVLISTPSPDAIT--KLAQLLNKPQDAIRDWFRAQDNIRMSEPTAAAAAHDSQQNPFMQSPIMQVAEHTMRQATAKPSM 408
            ++W+ T  QK  LL  F++  YP + +K  +A  L V   ++SKWFQHRRE L RLGQFK +    RRTP EL  L+A+F  + Y + + +  L   +  ++  QI+LWFKH+R+   K  +  ++  +  S+    S A  P    +        S +++ P        +L P +Q       Q QQLP +P  +    +    +S    H    + PQ         F   +L+ALQ      I+ PS D  +  +LA         +  W   +  +R            +    F  S ++  A++     +  P++
Sbjct:  292 ARWKPTVEQKSYLLGEFEKNSYPSVEEKEAMADHLNVPRPRVSKWFQHRRESLVRLGQFKGESQPQRRTPAELAHLEASFANNPYSSRDEMAHLQEVIGTLSETQIRLWFKHKRRAMSKSGQKGSTASTYGSARGGSSVAGSPAPSPILAQGSERPSPNASPPLRGAGQAQDLQPQLQVHLNKQKQAQQLPSYPPPLPMELSQKQAHSPHDQHRQQSRMPQAQYGVPMFHFHSDQLMALQGA---FIANPSMDVASERRLAHFFRMDPVQVSQWMTQERAVRSGSMVGFVPTGHAPAGTFTTSSVLPTAQNGKPTQSGSPNL 610          
BLAST of Ggra1257.t1 vs. uniprot
Match: A0A7S1TKK2 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKK2_9RHOD)

HSP 1 Score: 102 bits (254), Expect = 3.800e-19
Identity = 53/114 (46.49%), Postives = 74/114 (64.91%), Query Frame = 0
Query:   98 KWRVTPAQKEVLLKAFDEEPYPELHKKNTLAHQLGVTTAQISKWFQHRREHLTRLGQFKAQYNRTRRTPEELDVLQAAFDADRYP-TAERLQQLANQLQGVTPKQIKLWFKHRR 210
            +WR +  Q   LL  F+ EPYP +  K  +A +LG+  AQ++KWFQHRRE L + G F+ Q  R RRT EE   L+  F+   YP T + + +L+ QL G+TP+Q+KLWFKH+R
Sbjct:    9 RWRPSERQLATLLAEFEREPYPSVEHKCDVAERLGMKHAQVAKWFQHRREALVKKGCFEGQQRRERRTQEERLALEREFERCAYPSTTDTIPRLSRQL-GMTPQQVKLWFKHKR 121          
BLAST of Ggra1257.t1 vs. uniprot
Match: A0A2Y9IGP8 (double homeobox protein A n=6 Tax=Mustelidae TaxID=9655 RepID=A0A2Y9IGP8_ENHLU)

HSP 1 Score: 58.9 bits (141), Expect = 1.090e-6
Identity = 39/136 (28.68%), Postives = 71/136 (52.21%), Query Frame = 0
Query:   97 SKWRVTPAQKEVLLKAFDEEPYPELHKKNTLAHQLGVTTAQISKWFQHRR-EHLTRLG------------------QFKAQYNRTRR---TPEELDVLQAAFDADRYPTAERLQQLANQLQGVTPKQIKLWFKHRR 210
            ++ R T  Q ++L+KAFD+ PYP    K  LA ++    +++  WFQ+RR  H ++                    + +++ +R RR   TP +L  L  AF  + YP  +  +QLA ++ G+   ++++WF++RR
Sbjct:    6 NRTRFTEDQLKILIKAFDQNPYPGYATKQRLALEVNTDESRVQIWFQNRRARHQSQKKSEPDEDLESSQDQDHAEEEIQSREDRRRRSSYTPSQLHTLIQAFTNNPYPGIDTREQLAKEI-GIPESRVQIWFQNRR 140          
BLAST of Ggra1257.t1 vs. uniprot
Match: A0A1Y2ECM4 (Uncharacterized protein n=3 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y2ECM4_9FUNG)

HSP 1 Score: 57.4 bits (137), Expect = 3.160e-6
Identity = 36/114 (31.58%), Postives = 63/114 (55.26%), Query Frame = 0
Query:   99 WRVT-PAQKEVLLKAFDEEPYPELHKKNTLAHQLGVTTAQISKWFQHRREHLTRLGQFKAQYNRTRRTPEELDVLQAAFDADRYPTAERLQQLANQLQGVTPKQIKLWFKHRRK 211
            WRV  P+++ +L + ++  P P    K +LA +L V+   I +WF  RR     L +       +R+TPE+L +L+  F    +PT E+ + LA+    ++ KQ+  WF+++RK
Sbjct:   10 WRVIGPSEENILERQYEYNPNPSSATKMSLALKLHVSPQNIGRWFSARRRREAGLARA------SRKTPEQLSLLEEFFKHTHFPTQEQKENLAHGTH-LSYKQVNSWFQNQRK 116          
BLAST of Ggra1257.t1 vs. uniprot
Match: A0A1Y3MQN8 (Uncharacterized protein n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3MQN8_PIRSE)

HSP 1 Score: 56.6 bits (135), Expect = 4.920e-6
Identity = 36/114 (31.58%), Postives = 61/114 (53.51%), Query Frame = 0
Query:   99 WRVT-PAQKEVLLKAFDEEPYPELHKKNTLAHQLGVTTAQISKWFQHRREHLTRLGQFKAQYNRTRRTPEELDVLQAAFDADRYPTAERLQQLANQLQGVTPKQIKLWFKHRRK 211
            WRV  P ++ +L   ++  P P    K +LA +L V+   I +WF  RR     L +       +R+TPE+L +L+  F    +PT E+ + LA+    ++ KQ+  WF+++RK
Sbjct:   10 WRVIGPGEENILESQYEYNPNPSSATKMSLALKLHVSPQNIGRWFSARRRRDAGLARA------SRKTPEQLSLLEEFFKHTHFPTQEQKENLAHGT-NLSYKQVNSWFQNQRK 116          
The following BLAST results are available for this feature:
BLAST of Ggra1257.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A2V3IHF98.630e-15066.83Double homeobox protein 4C n=1 Tax=Gracilariopsis ... [more]
A0A7S1EPD83.720e-2646.49Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7S1EU415.230e-2647.73Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S1THT71.100e-2145.22Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
A0A7S3A1E64.190e-2148.70Hypothetical protein (Fragment) n=2 Tax=Rhodosorus... [more]
A0A5J4Z2904.630e-2026.40Double homeobox protein 4C n=1 Tax=Porphyridium pu... [more]
A0A7S1TKK23.800e-1946.49Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A2Y9IGP81.090e-628.68double homeobox protein A n=6 Tax=Mustelidae TaxID... [more]
A0A1Y2ECM43.160e-631.58Uncharacterized protein n=3 Tax=Neocallimastigacea... [more]
A0A1Y3MQN84.920e-631.58Uncharacterized protein n=1 Tax=Piromyces sp. (str... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 157..220
e-value: 2.3E-10
score: 50.5
coord: 94..156
e-value: 1.2E-7
score: 41.4
IPR001356Homeobox domainPFAMPF00046Homeodomaincoord: 97..146
e-value: 3.4E-12
score: 46.0
coord: 160..214
e-value: 1.8E-13
score: 50.1
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 92..152
score: 13.669257
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 155..216
score: 16.390068
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 102..146
e-value: 2.61929E-11
score: 56.8681
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 161..207
e-value: 5.32288E-12
score: 59.1793
NoneNo IPR availableGENE3D1.10.10.60coord: 156..223
e-value: 4.7E-15
score: 56.8
coord: 91..155
e-value: 6.0E-14
score: 53.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 249..267
IPR044977Homeobox-DDT domain protein RLT1/2/3PANTHERPTHR36968HOMEOBOX-DDT DOMAIN PROTEIN RLT2coord: 158..258
coord: 94..146
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 88..151
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 160..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000208_piloncontigtig00000208_pilon:39163..40836 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1257.t1Ggra1257.t1Gracilaria gracilis GNS1m malemRNAtig00000208_pilon 39163..40836 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1257.t1 ID=Ggra1257.t1|Name=Ggra1257.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=558bp
MAHHQPQPPKLSNVAPPLLPPPSQPPPLLPPTTPDLSAPLATASTPTLGA
TALLVTASPTTPALSTSPAPPIVTFAPVPAAAPVTLSAPPLSQPTHSKWR
VTPAQKEVLLKAFDEEPYPELHKKNTLAHQLGVTTAQISKWFQHRREHLT
RLGQFKAQYNRTRRTPEELDVLQAAFDADRYPTAERLQQLANQLQGVTPK
QIKLWFKHRRKQDQKRRRSNTSPISLRSSPTLPSHAVQPGLRSMRPVDLS
ASSHDSTRPDWRTTLPTNLVPNVQQCQQLPHPTLIQTPSASNVPYSFDAH
HYYPYKQPQFLVSPSQSPFSRSELLALQAVQTVLISTPSPDAITKLAQLL
NKPQDAIRDWFRAQDNIRMSEPTAAAAAHDSQQNPFMQSPIMQVAEHTMR
QATAKPSMIDSHTSPTLHDLRKIDNDISMSEKSSKMVTDDMKAQTTRELD
THKEFSTLDDKQSMDTALKTNAPREAAAQNNVMPNVGTGIYPTYVYPNSV
VDGGIMVQPHSAPFQQAQASSTPTLAPLRFMPSTSNAAPYIAQNAVWYHA
APSLQPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR044977RLT1/2/3
IPR009057Homeobox-like_sf