Ggra1225.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1225.t1
Unique NameGgra1225.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length206
Homology
BLAST of Ggra1225.t1 vs. uniprot
Match: A0A2V3IJJ8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJJ8_9FLOR)

HSP 1 Score: 90.1 bits (222), Expect = 1.970e-19
Identity = 42/116 (36.21%), Postives = 73/116 (62.93%), Query Frame = 0
Query:   59 LSEWDEPHSNTKRITVAVLMPSGILRGDFYAQILEN-RFLKIKLTWPRAMMHIEVQHEKWLNNPSI-KYTDLHPEMMGFERALKRLREHSKDRVLSMSKIHLPFSVEPQF-QSDNL 171
            LS W EP +  KR+T AV++PSG+ RG+F  QI++    L++ +TWP+ ++ +E+ H +WL +    +    HP+++GF+ +L+ L+    + V S+++I  PF V+    Q DNL
Sbjct:    2 LSVWTEPETTLKRVTAAVVLPSGVGRGEFLIQIIDGGECLELSVTWPQPLVDVELMHRRWLQSVHADRMQSYHPKIIGFQNSLRNLKGKVTEDVKSVARILFPFPVQSHIAQKDNL 117          
BLAST of Ggra1225.t1 vs. uniprot
Match: A0A2V3IKF9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKF9_9FLOR)

HSP 1 Score: 74.3 bits (181), Expect = 2.710e-13
Identity = 43/139 (30.94%), Postives = 70/139 (50.36%), Query Frame = 0
Query:   56 FYHLSEWDEPHSNTKRITVAVLMPSGILRGDFYAQILENRFL-KIKLTWPRAMMHIEVQHEKWLNNPSIKYTDLHPEMMGFERALKRLREHSKDRVLSMSKIHLPFSVEPQFQSDN-LRFTCGSIVFNIPLKAPVENYA 192
            FY  + W+   +     ++A+L+P+GI + +  +Q+++N  + ++ +   + M    +  + WL          HP + GF +ALK LR  +  R+ S   IH PF+VE Q      L F  G  VFN+ LKAP   YA
Sbjct:   12 FYLRAIWEHEETLVSNASLAILLPAGITKSNISSQVVQNGMISEVVIDLLKVMTDSIMLFKSWLPKQFDPLKPYHPNIGGFNKALKELRGDNSQRIHSFCHIHPPFTVETQVPLKQVLNFGEGLRVFNVDLKAPDVTYA 150          
The following BLAST results are available for this feature:
BLAST of Ggra1225.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IJJ81.970e-1936.21Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IKF92.710e-1330.94Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000926_piloncontigtig00000926_pilon:329052..329669 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1225.t1Ggra1225.t1Gracilaria gracilis GNS1m malemRNAtig00000926_pilon 329052..329669 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1225.t1 ID=Ggra1225.t1|Name=Ggra1225.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=206bp
MSLVPRNSLETRREQSRVSVHLVSEGDEDDTIEEEGSTSANVNKWLLFDD
LDWRPFYHLSEWDEPHSNTKRITVAVLMPSGILRGDFYAQILENRFLKIK
LTWPRAMMHIEVQHEKWLNNPSIKYTDLHPEMMGFERALKRLREHSKDRV
LSMSKIHLPFSVEPQFQSDNLRFTCGSIVFNIPLKAPVENYALGAQSIDE
FELVN*
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