Ggra1223.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1223.t1
Unique NameGgra1223.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length263
Homology
The following BLAST results are available for this feature:
BLAST of Ggra1223.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..165
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..262
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000926_piloncontigtig00000926_pilon:158198..159058 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1223.t1Ggra1223.t1Gracilaria gracilis GNS1m malemRNAtig00000926_pilon 158198..159058 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1223.t1 ID=Ggra1223.t1|Name=Ggra1223.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=263bp
MKYFVLIQALFATSLARFLFGGLPGTSTDSAHTAPVVRQMGPGMGAGPGM
GAGQGLGMGGMGMGGMGMGMGGGMPPAPAPAPAPAPAPAPAPAPAPAPAP
APAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAP
APAPAPAPFPFPFPFPGGILTSTSTSTATGTGTGGGGGSGGDGTGVGAVA
LAGVGGGGSSSPGFFAGGIGTGGSGIAAADDGGSAINLGSFFNGGFGGPG
GFGGLGTGTATA*
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