Ggra1219.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1219.t1
Unique NameGgra1219.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length392
Homology
BLAST of Ggra1219.t1 vs. uniprot
Match: A0A2V3IHZ6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHZ6_9FLOR)

HSP 1 Score: 444 bits (1141), Expect = 3.250e-152
Identity = 213/333 (63.96%), Postives = 258/333 (77.48%), Query Frame = 0
Query:   55 LFSRAPSSPTLLPTARVCDRDQYAHASRPSYAFFFVTGRSATQHLSRALVSRRAPVAFVTHEQEHVTQRTKHVVFHDYRALAAEADEAAFNRSAAHYVRQSKLPMYRQLLRAHAATRLVYTGHVPMAFGLGPALVHALPPGSLRVVRVRRDRLATAVSLMALGPPAEDPWGATVVGANST-ANLTLFAMPPPTVNSRWFPTPTDAFVRLGVSPSAWRSMNRFQRWLWYVDDVECRWQAMVHALGDRFSWMEDSVENLSAMDGGRAWARLAQFVGVDVDWEKVAARDNSIEHKQRLKVDASESQLREWDMQYRQLVGECSIAPSLSYGWQHFAL 386
            L S  P+ P   PT R+   D+Y +    SYAFFF TGRS TQHLSR LVSR +P+++VTHE+EHV  RTK VV  +YR LA+  +EA FN S   YV+++K+P Y+QL+  H A RL+YTGHVPMAFGLGPALV  LPPGS+R+VRVRR+RLATA SLMALGP  EDPWG++   +N+T AN T   +P  T+N RWFP PTDAFVRL VS   W S+NRFQRWLWYVDDVECRWQA+V+ LGDRFSWME+S+E+L+ MDGGR W+R+A+FVGVD+DW KV  RDNSI++KQR K+  +E QLREWDMQYR+LVG C I+ SLSYGW  FAL
Sbjct:   55 LLSAPPTPPPSFPTVRIAANDRYNNVHALSYAFFFGTGRSGTQHLSRVLVSRESPISYVTHEEEHVDVRTKQVVLREYRPLASLPNEAHFNTSVEAYVKRTKIPFYKQLMYKHRARRLLYTGHVPMAFGLGPALVKNLPPGSVRIVRVRRERLATAASLMALGPEEEDPWGSS---SNATVANST--TLPDATLNMRWFPRPTDAFVRLQVSTGVWASLNRFQRWLWYVDDVECRWQALVYGLGDRFSWMEESLESLTVMDGGRTWSRIAEFVGVDIDWRKVGVRDNSIQYKQRTKISVAEEQLREWDMQYRKLVGRCKISSSLSYGWSDFAL 382          
BLAST of Ggra1219.t1 vs. uniprot
Match: R7Q8Q7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8Q7_CHOCR)

HSP 1 Score: 369 bits (946), Expect = 1.090e-122
Identity = 183/313 (58.47%), Postives = 221/313 (70.61%), Query Frame = 0
Query:   71 VCDRDQYAHASRPSYAFFFVTGRSATQHLSRALVSRRAPVA--FVTHEQEHVTQRTKHVVFHDYRALAAEADEAAFNRSAAHYVRQSKLPMYRQLLRAHAATRLVYTGHVPMAFGLGPALVHALPPGSLRVVRVRRDRLATAVSLMALGPPAEDPWGATVVGANSTANLTLFAMPPPTVNSRWFPTPTDAFVRLGVSPSAWRSMNRFQRWLWYVDDVECRWQAMVHALGDRFSWMEDSVENLSAMDGGRAWARLAQFVGVDVDWEKVAARDNSIEHKQRLKVDASESQLREWDMQYRQLVGECSIAPSLSYGW 381
            +   D+      P Y F F TGRS TQHLSR L  +  P    +VTHE+EH+  RTK VV  DYR LAA AD+A F   A  Y+ + KLP Y +LL+ H+A RLVYTGH+PMAFGLGPALV  LPPG++RV+R+RR+R+ATAVSLMALGP  EDPWGAT      +    ++A     VN RWFP P+DA VRL V    W  +NRFQRWLWYVDDVECRWQA  H+LG RFS ME+S+ENL+ +DGG++  R+A+F+GV VDW K  ARDNSIEHK R+KV+ASES LR+WD  YRQ VG C I+   SYGW
Sbjct:   69 ISSTDRCGDPKSPCYVFVFGTGRSGTQHLSRVLKPKPNPAVPVYVTHEEEHLRARTKLVVHRDYRRLAACADKAQFRVQAEQYITRVKLPFYTKLLKRHSAKRLVYTGHLPMAFGLGPALVRTLPPGTVRVLRLRRERIATAVSLMALGPEKEDPWGATT--ERDSDGQLIYA---DAVNRRWFPKPSDAMVRLHVEAHVWAKLNRFQRWLWYVDDVECRWQAFRHSLGSRFSLMEESLENLNMLDGGQSLVRVAEFMGVAVDWSKAGARDNSIEHKMRVKVNASESSLRQWDEAYRQAVGSCRISSKYSYGW 376          
BLAST of Ggra1219.t1 vs. uniprot
Match: A0A1X6NWE8 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWE8_PORUM)

HSP 1 Score: 241 bits (615), Expect = 1.750e-72
Identity = 155/341 (45.45%), Postives = 195/341 (57.18%), Query Frame = 0
Query:   59 APSSPTLLPTARVCDRDQYAHASRPSYAFFFVTGRSATQHLSRALVSRRAPVAFVTHEQEHVTQRTKHVVFHDYRALAAEADEAAFNRSAAHYVRQSKLPMYRQLLRA------------HAATRLVYTGHVPMAFGLGPALVHALPPGSLRVVRVRRDRLATAVSLMALGPPAEDPWGATV-VGANSTANLTLF-----AMPPPTVNSRWFPTPTDAFVRLGVSPSAWRSMNRFQRWLWYVDDVECRWQAMVHALGDRFSWMEDSVENLSAMDGGRAWARLAQFVGVDVDWEKVAARDNSIEHKQRLKVDASESQLREWDMQYRQLVGECSIAPSLSYGW 381
            AP++ T  P+             R S A       +A  HL+R L S  AP A VTHE E  T R + VV   YR LAA    AAF+ +AA +VR++ LP  R+ L A            H A   VYTGHVP+A+GLGPAL  AL  G LRVVR+RR+RLATAVSLMALGPP ED W A V V A++ A            PP T   RWFP P+  FV L V  + W  +NRFQR+LWYVDDVECRWQ +   L D  + +E  +E L  +DGGR + RLA+F+ V V+  + A R NS++ K+R K DA E  LR+WD +YR +VG C++       W
Sbjct:   75 APAASTTAPSGGRASDASTGGRGRGSAA-------AAAAHLARVLGS--APEAAVTHEAESPTLRPRDVVTRTYRRLAALPTVAAFDVAAARHVRRALLPALRERLAAASXXXXXXXXXXHTA---VYTGHVPLAYGLGPALADALG-GRLRVVRLRRERLATAVSLMALGPPEEDAWTADVAVPADAPAAAXXXXXXPAGRPPSTRGLRWFPPPSAPFVALRVGAADWARLNRFQRYLWYVDDVECRWQRLRTRLADGQA-LELQLEALDHLDGGREYGRLARFLRVRVNGTEAAVRHNSMQDKRRDKADAGEGLLRQWDREYRAVVGGCAVGDGRVLSW 401          
BLAST of Ggra1219.t1 vs. uniprot
Match: A0A7S3EFU3 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EFU3_9RHOD)

HSP 1 Score: 194 bits (494), Expect = 3.830e-55
Identity = 120/320 (37.50%), Postives = 167/320 (52.19%), Query Frame = 0
Query:   67 PTARVCDRDQYAHASRPSYAFFFVTGRSATQHLSRALVSRRAPVAFVTHEQEHVTQRTKHVVFHDYRALAAEADEAAFNRSAAHYVRQSKLPMYRQLLRAHAATRLVY-TGHVPMAFGLGPALVHALPPGSLRVVRVRRDRLATAVSLMALGPPAEDPWGATVVGANSTANLTLFAMPPPTVNSRWFPTPTDAFVRLGVSPSAWRSMNRFQRWLWYVDDVECRWQAMVHALGDRFSWMEDSVENLSAMDGGRAWARLAQFVGVDVDW--EKVAARDNSIEHKQR--LKVDASESQLREWDMQYRQLVGECSIAPSLSYGW 381
            P+ R       A        F F TGR+ T+H S     + A    V H+ E     TK  V + YR  AA  D       A  ++ + KLPM +  L+A   +++ + TGHVP+AFG+ P L+  L   +   VR+RRDR+  A+SLMALGP +EDPW      +  + +L          N RWFP P+D  V+L      W   NRFQR+LW VDD ECRWQ++       F ++E  +E+L  ++G   + ++A FVG  +    E + ARDNSIE K R  +K  A E  LR WD QYR+ VG C +  +L+Y W
Sbjct:   64 PSRRFMAPSLKAEFEGKKLVFVFSTGRTGTKHFSSVFGGKEA---LVNHQDESDLVSTKEAVNNVYRPFAARND----TELARKFLAEVKLPMIKSRLQAADDSKVYFQTGHVPLAFGMAPVLLELLGSNTFAAVRIRRDRIQQALSLMALGPESEDPW------SEDSESL----------NRRWFPRPSDFHVKLRPDEPVWNRFNRFQRYLWLVDDTECRWQSLKRKYA--FDYLEVQMESLLQLNGVEQYEKIAAFVGTGLSARVESMHARDNSIEQKGRDNMKWVADEKTLRLWDEQYRKSVGPCVVDQNLTYKW 358          
BLAST of Ggra1219.t1 vs. uniprot
Match: A0A5J4YXK0 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXK0_PORPP)

HSP 1 Score: 182 bits (463), Expect = 2.440e-49
Identity = 133/372 (35.75%), Postives = 185/372 (49.73%), Query Frame = 0
Query:   83 PSYAFFFVTGRSATQHLSRALV---------SRRAPVAFVTHEQEHVTQRTKHVVFHDYR--------ALAAEAD------------------------EAAFNRSAAHYVRQSKLPMYRQLLRAHA--ATRLVYTGHVPMAFGLGPALVHALPPGSLRVVRVRRDRLATAVSLMALGPPAEDPWGATVVGANSTANLTLFAM-PPPTVNSRWFPTPTDAFVRLGVSPSAWRS-MNRFQRWLWYVDDVECRWQAMV--HALG---DRFSWMEDSVENLSAMDGGRAWARLAQFVGVDVDWEK----------VAARDNSIEHKQRLKVD-------------ASESQLREWDMQYRQLVGECSIAPSLSYGW 381
            P + F F TGR AT HL+   +         S   P  FVTH+ EH +  TK  V   YR        A+A+ +D                        E +F  +A  +VRQ++LP Y   +R H       ++TGHVP+AFG+  +L+  LP G++R+VR+RRDR+  A+SLMALGP ++D W        +       +M    T   RWF +P  A V L      WR+ +NRFQ++LWYVDD ECRWQA++  HA      R   +E SVE L  +    A+AR+A F G+ V  E+          +AAR NSI+ K+R K+              A+E+ LRE D  YR LVG C I+P+ +  W
Sbjct:  113 PVFGFVFSTGRCATAHLAAVFLDLARHQNAQSASRPQPFVTHQTEHNSMPTKLFVDRYYRQLVSLPRAAVASVSDQDGEIRTPDAIQGVKGGQGYEGESEKSFEAAALAFVRQNRLPFYLDQMRRHGPGVHTHIFTGHVPLAFGMADSLLEVLP-GTVRIVRMRRDRIQLALSLMALGPASQDAWAHIDRKPGNERRQDNGSMRSDETSQLRWFASPHHAHVLLRPPLDVWRTQLNRFQKYLWYVDDTECRWQALLRRHAAAIASGRLRVLETSVEELEQISFRTAYARIAHFWGLSVGAEQDGDSSWNPALLAARHNSIQSKKRDKILSLQEVQDTAPAHLANETWLREMDDAYRLLVGACQISPTETLSW 483          
BLAST of Ggra1219.t1 vs. uniprot
Match: A0A7S3EE82 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EE82_9RHOD)

HSP 1 Score: 140 bits (353), Expect = 2.550e-35
Identity = 86/243 (35.39%), Postives = 122/243 (50.21%), Query Frame = 0
Query:   67 PTARVCDRDQYAHASRPSYAFFFVTGRSATQHLSRALVSRRAPVAFVTHEQEHVTQRTKHVVFHDYRALAAEADEAAFNRSAAHYVRQSKLPMYRQLLRAHAATRLVY-TGHVPMAFGLGPALVHALPPGSLRVVRVRRDRLATAVSLMALGPPAEDPWGATVVGANSTANLTLFAMPPPTVNSRWFPTPTDAFVRLGVSPSAWRSMNRFQRWLWYVDDVECRWQAMVHALGDRFSWMEDSVE 308
            P+ R       A        F F TGR+ T+H S     + A    V H+ E     TK  V + YR  AA  D       A  ++ + KLPM +  L+A   +++ + TGHVP+AFG+ P L+  L   +   VR+RRDR+  A+SLMALGP +EDPW      +  + +L          N RWFP P+D  V+L      W   NRFQR+LW +DD E RWQ++     + F ++E  +E
Sbjct:   64 PSRRFMAPSLKAEFEGKKLVFVFSTGRTGTKHFSSVFGGKEA---LVNHQDESDLVSTKEAVNNVYRPFAARND----TELARKFLAEVKLPMIKSRLQAADDSKVYFQTGHVPLAFGMAPVLLELLGSNTFAAVRIRRDRIQQALSLMALGPESEDPW------SEDSESL----------NRRWFPRPSDFHVKLRPDEPVWNRFNRFQRYLWLLDDTESRWQSLKRK--NAFDYLEVEME 281          
BLAST of Ggra1219.t1 vs. uniprot
Match: A0A7S0T7Q7 (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T7Q7_9RHOD)

HSP 1 Score: 109 bits (273), Expect = 2.060e-25
Identity = 64/140 (45.71%), Postives = 84/140 (60.00%), Query Frame = 0
Query:  194 PGSLRVVRVRRDRLATAVSLMALGPPAEDPWGATVVGANSTANLTLFAMPPPTVNSRWFPTPTDAFVRL----GVS-PSAWRSMNRFQRWLWYVDDVECRWQAMVHALG------DRFSWMEDSVENLSAMDGGRAWARL 322
            PG+LR+VRVRRDR+A A+SLMALGP  +D W       + +A+ T         N RWFPTP DA V L    GVS   AWR ++R Q++LWYVDDVECRW A+V ++       ++   ME ++E L  +  G A  RL
Sbjct:    2 PGTLRIVRVRRDRIALALSLMALGPENQDSWT-----LHESASTTADEEEGKDRNLRWFPTPWDAHVLLRPAEGVSVDEAWRKLHRLQKYLWYVDDVECRWMALVRSVANNATRREKTRLMEINLEELDHISRGLALQRL 136          
The following BLAST results are available for this feature:
BLAST of Ggra1219.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IHZ63.250e-15263.96Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q8Q71.090e-12258.47Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NWE81.750e-7245.45Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S3EFU33.830e-5537.50Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YXK02.440e-4935.75Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S3EE822.550e-3535.39Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S0T7Q72.060e-2545.71Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..44
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 30..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 41..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..391
NoneNo IPR availableTMHMMTMhelixcoord: 30..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000926_piloncontigtig00000926_pilon:138982..140157 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1219.t1Ggra1219.t1Gracilaria gracilis GNS1m malemRNAtig00000926_pilon 138982..140157 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1219.t1 ID=Ggra1219.t1|Name=Ggra1219.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=392bp
MASKRSKLASTATKRLLRRCLRRLSVRTRVLLLVAFGFLCGSLSQLLLLR
CVLPLFSRAPSSPTLLPTARVCDRDQYAHASRPSYAFFFVTGRSATQHLS
RALVSRRAPVAFVTHEQEHVTQRTKHVVFHDYRALAAEADEAAFNRSAAH
YVRQSKLPMYRQLLRAHAATRLVYTGHVPMAFGLGPALVHALPPGSLRVV
RVRRDRLATAVSLMALGPPAEDPWGATVVGANSTANLTLFAMPPPTVNSR
WFPTPTDAFVRLGVSPSAWRSMNRFQRWLWYVDDVECRWQAMVHALGDRF
SWMEDSVENLSAMDGGRAWARLAQFVGVDVDWEKVAARDNSIEHKQRLKV
DASESQLREWDMQYRQLVGECSIAPSLSYGWQHFALRSNSN*
back to top