Ggra1217.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1217.t1
Unique NameGgra1217.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length280
Homology
BLAST of Ggra1217.t1 vs. uniprot
Match: A0A2V3ICB6 (Uncharacterized protein n=4 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICB6_9FLOR)

HSP 1 Score: 140 bits (352), Expect = 9.090e-34
Identity = 93/251 (37.05%), Postives = 139/251 (55.38%), Query Frame = 0
Query:    4 LGYVCHPSYDCRCDPGKLISRQTALKHRTLAQNIAE--EMGKVRFLPLPEAIQDLSQLHSISDTLEDHSHSKYDSSPSTEVRNPGENEICSLQCTTSNLESHSMSLNRKIVHPHETDIGFNVGESTNTNSESALKSDISVEAKYEN---TEHLKRSEAIPPNSNPVCTDIKFRIFMERDSKELSLGIKHALPDSFMDDFFKDSTLDDEPHLRYKSFKGIREALLPNSGVGTSEHPAYEQFHKALLVRADHS 249
            LGY+CHP Y CRC  GKL+SR+TA++HR +A N  +  E  +  FLPLP AI    QL S+      ++H+       +EV    EN+I + +  +SN    + +++  +              ST + SE++L      E   ++   T +   S+++  N + +C D KF +FME+ +  L LGIKH+  D+FM D  KD ++ D     YKSF G+R+ALL NSG+ T+EHPA  +FHKAL   +D S
Sbjct:    4 LGYICHPDYKCRCGKGKLVSRETAMRHRAVAHNRIDGNEHDEDIFLPLPSAITSSLQLSSL------YAHA-------SEV---DENDIENGEAYSSNSTQSNSTVSITL--------------STRSESENSLCLIPVAERVIDHVQITANEVSSDSLGSNRHVMCLDRKFALFMEKHANVLGLGIKHSADDAFMTDLIKDISVSDSSQRPYKSFSGVRKALLRNSGLCTTEHPACTKFHKALDKTSDGS 224          
BLAST of Ggra1217.t1 vs. uniprot
Match: A0A2V3ICI7 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICI7_9FLOR)

HSP 1 Score: 107 bits (267), Expect = 4.690e-24
Identity = 87/253 (34.39%), Postives = 125/253 (49.41%), Query Frame = 0
Query:    4 LGYVCHPSYDCRCDPGKLISRQTALKHRTLAQNIAEEMGKVR--FLPLPEAIQDLSQLHSISDTLEDHSHSKYDSSPSTEVRNPGENEICSLQCTTSNLESHSMSLNRKIVHPHETDIGFNVGESTNTNSESALKSDISVEAKYE-NTEHLKRSEAIPPNSNPV----CTDIKFRIFMERDSKELSLGIKHALPDSFMDDFFKDSTLDDEPHLRYKSFKGIREALLPNSGVGTSEHPAYEQFHKALLVRADHS 249
            LGYVCH    CR D GKL+SR+TA+ H   AQ+  E+ G+    FLPLP AI   SQL  +        +++       +++N  E    S    T ++ + S+ L+                    T SES   S +  E+++  +  H+  SE I      +      D KF +F+E  S  L LGIKH   D+FM D  KD++  D    RYKS  G+R AL+ NSG+ T+E PA  +F KAL +++D S
Sbjct:    4 LGYVCHNDNKCRYDKGKLVSRETAMLHLAAAQDRIEKHGRDESIFLPLPCAITSYSQLSFL--------YAQGIVVDEDDIQNAHEYSSES----TQSISTESVLLS--------------------TGSESERSSCVIQESEHLIDHVHITCSEFISDKIGGIRQFMSLDRKFALFIENYSNVLGLGIKHFADDAFMTDLSKDNSGSDRLERRYKSLSGVRNALVRNSGLHTTELPACPKFQKALEMKSDGS 224          
BLAST of Ggra1217.t1 vs. uniprot
Match: A0A2V3IF10 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF10_9FLOR)

HSP 1 Score: 79.7 bits (195), Expect = 1.580e-14
Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = 0
Query:  174 MERDSKELSLGIKHALPDSFMDDFFKDSTLDDEPHLRYKSFKGIREALLPNSGVGTSEHPAYEQFHKALLVRADHS 249
            ME+ +  L LGIKH+  D+FM D  KD ++ D     YKSF G+R+ALL NSG+ T+EHPA  +FHKAL   +D S
Sbjct:    1 MEKHANVLGLGIKHSADDAFMTDLIKDISVSDSSQRPYKSFSGVRKALLRNSGLCTTEHPACTKFHKALEKTSDGS 76          
The following BLAST results are available for this feature:
BLAST of Ggra1217.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3ICB69.090e-3437.05Uncharacterized protein n=4 Tax=Gracilariopsis cho... [more]
A0A2V3ICI74.690e-2434.39Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IF101.580e-1451.32Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000926_piloncontigtig00000926_pilon:83795..84634 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1217.t1Ggra1217.t1Gracilaria gracilis GNS1m malemRNAtig00000926_pilon 83795..84634 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1217.t1 ID=Ggra1217.t1|Name=Ggra1217.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=280bp
MVPLGYVCHPSYDCRCDPGKLISRQTALKHRTLAQNIAEEMGKVRFLPLP
EAIQDLSQLHSISDTLEDHSHSKYDSSPSTEVRNPGENEICSLQCTTSNL
ESHSMSLNRKIVHPHETDIGFNVGESTNTNSESALKSDISVEAKYENTEH
LKRSEAIPPNSNPVCTDIKFRIFMERDSKELSLGIKHALPDSFMDDFFKD
STLDDEPHLRYKSFKGIREALLPNSGVGTSEHPAYEQFHKALLVRADHSC
SSMDFVLIPKLPDIQLMNTFLCGIAYTRC*
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