Ggra1215.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1215.t1
Unique NameGgra1215.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length618
Homology
BLAST of Ggra1215.t1 vs. uniprot
Match: A0A097IUY9 (Aspartate aminotransferase n=4 Tax=Grateloupia TaxID=31454 RepID=A0A097IUY9_9FLOR)

HSP 1 Score: 96.3 bits (238), Expect = 1.340e-17
Identity = 53/101 (52.48%), Postives = 66/101 (65.35%), Query Frame = 0
Query:   37 DWQRILEVHKSKKLVPFFDNSYQLFASENLDTSAWSTRMFVESGIEIFVAQSYGKDMGTRDKAENVAELNMPRFAAITPKP-----TVLNSVTSAVNTMPP 132
            DWQRILEV K+ +L+PFFDN+YQ FAS NLDT AWSTR+F  SGI++ +AQSY K+MG    A  V  LN   F   TP+P     T L +   A+ + PP
Sbjct:  205 DWQRILEVVKTNRLIPFFDNAYQGFASGNLDTDAWSTRLFANSGIDVIIAQSYAKNMGMY--AHRVGALN---FVCATPEPVHAIRTQLKATIRAMYSSPP 300          
BLAST of Ggra1215.t1 vs. uniprot
Match: A0A097IUW4 (Aspartate aminotransferase n=2 Tax=Gracilariopsis TaxID=2781 RepID=A0A097IUW4_GRALE)

HSP 1 Score: 86.7 bits (213), Expect = 1.830e-14
Identity = 43/70 (61.43%), Postives = 53/70 (75.71%), Query Frame = 0
Query:   38 WQRILEVHKSKKLVPFFDNSYQLFASENLDTSAWSTRMFVESGIEIFVAQSYGKDMGTRDKAENVAELNM 107
            W++IL+V K   LVPFFDN+YQ FAS +LDT AWSTR+F +SGIE+FVAQSY K+MG     E V  LN+
Sbjct:  200 WKQILQVVKEAALVPFFDNAYQGFASGDLDTDAWSTRLFADSGIEMFVAQSYAKNMGMY--GERVGALNV 267          
BLAST of Ggra1215.t1 vs. uniprot
Match: A0A097IUW8 (Aspartate aminotransferase n=1 Tax=Gloiopeltis furcata TaxID=42017 RepID=A0A097IUW8_9FLOR)

HSP 1 Score: 79.0 bits (193), Expect = 5.870e-12
Identity = 35/57 (61.40%), Postives = 46/57 (80.70%), Query Frame = 0
Query:   38 WQRILEVHKSKKLVPFFDNSYQLFASENLDTSAWSTRMFVESGIEIFVAQSYGKDMG 94
            W  ILEV K + L+PFFDN+YQ FAS +L+T AWS R FV++G+++FVAQSY K+MG
Sbjct:  200 WLSILEVVKKRGLIPFFDNAYQGFASGSLETDAWSVRAFVDAGLDMFVAQSYAKNMG 256          
BLAST of Ggra1215.t1 vs. uniprot
Match: A0A097IUV1 (Aspartate aminotransferase n=3 Tax=Gigartinaceae TaxID=29217 RepID=A0A097IUV1_CHOCR)

HSP 1 Score: 77.8 bits (190), Expect = 1.390e-11
Identity = 35/57 (61.40%), Postives = 46/57 (80.70%), Query Frame = 0
Query:   38 WQRILEVHKSKKLVPFFDNSYQLFASENLDTSAWSTRMFVESGIEIFVAQSYGKDMG 94
            W +IL+V K +KLVPFFDN+YQ FAS +L+T AWS R FV +G+++ VAQSY K+MG
Sbjct:  200 WLQILDVVKRRKLVPFFDNAYQGFASGSLETDAWSVRTFVAAGLDMLVAQSYAKNMG 256          
BLAST of Ggra1215.t1 vs. uniprot
Match: A0A097IUU7 (Aspartate aminotransferase n=1 Tax=Eucheuma denticulatum TaxID=305493 RepID=A0A097IUU7_9FLOR)

HSP 1 Score: 73.9 bits (180), Expect = 2.560e-10
Identity = 33/57 (57.89%), Postives = 44/57 (77.19%), Query Frame = 0
Query:   38 WQRILEVHKSKKLVPFFDNSYQLFASENLDTSAWSTRMFVESGIEIFVAQSYGKDMG 94
            W+ IL+V +  KLVPFFDN+YQ FAS +L+  AWS R FV++GI++ V QSY K+MG
Sbjct:  206 WEHILQVVQEGKLVPFFDNAYQGFASGSLEEDAWSVRRFVKAGIDMLVGQSYAKNMG 262          
BLAST of Ggra1215.t1 vs. uniprot
Match: A0A3L6QI48 (Aspartate aminotransferase n=5 Tax=Panicoideae TaxID=147369 RepID=A0A3L6QI48_PANMI)

HSP 1 Score: 73.2 bits (178), Expect = 5.680e-10
Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = 0
Query:   19 LNPTPELLTLKDCFKHCTDWQRILEVHKSKKLVPFFDNSYQLFASENLDTSAWSTRMFVESGIEIFVAQSYGKDMGTRDKAENVAELNM 107
            ++PTPE             W++I +V + KK +PFFD +YQ FAS +LD  A+S R+FV+ G+E+FVAQSY K++G    AE V  +N+
Sbjct:  263 IDPTPE------------QWEKIADVIQEKKHMPFFDVAYQGFASGSLDEDAFSVRLFVKRGMEVFVAQSYSKNLGLY--AERVGAINV 337          
BLAST of Ggra1215.t1 vs. uniprot
Match: A0A3L6RXD2 (Aspartate aminotransferase n=2 Tax=PACMAD clade TaxID=147370 RepID=A0A3L6RXD2_PANMI)

HSP 1 Score: 72.8 bits (177), Expect = 6.990e-10
Identity = 38/89 (42.70%), Postives = 57/89 (64.04%), Query Frame = 0
Query:   19 LNPTPELLTLKDCFKHCTDWQRILEVHKSKKLVPFFDNSYQLFASENLDTSAWSTRMFVESGIEIFVAQSYGKDMGTRDKAENVAELNM 107
            ++PTPE             W++I +V + KK +PFFD +YQ FAS +LD  A+S R+FV+ G+E+FVAQSY K++G    AE +  +N+
Sbjct:  241 IDPTPE------------QWEKIADVIQEKKHMPFFDVAYQGFASGSLDEDAFSVRLFVKRGMEVFVAQSYSKNLGLY--AERIGAINV 315          
BLAST of Ggra1215.t1 vs. uniprot
Match: A0A453PWZ9 (Aspartate aminotransferase n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453PWZ9_AEGTS)

HSP 1 Score: 70.9 bits (172), Expect = 7.740e-10
Identity = 37/89 (41.57%), Postives = 56/89 (62.92%), Query Frame = 0
Query:   19 LNPTPELLTLKDCFKHCTDWQRILEVHKSKKLVPFFDNSYQLFASENLDTSAWSTRMFVESGIEIFVAQSYGKDMGTRDKAENVAELNM 107
            ++PTPE             W+++ +V + KK +PFFD +YQ FAS +LD  A S R+FV+ G+E+FVAQSY K++G    AE +  +N+
Sbjct:   60 IDPTPE------------QWEKLADVIEEKKHMPFFDVAYQGFASGSLDEDASSVRLFVKRGLEVFVAQSYSKNLGLY--AERIGAINV 134          
BLAST of Ggra1215.t1 vs. uniprot
Match: A0A097IUW6 (Aspartate aminotransferase n=1 Tax=Kappaphycus alvarezii TaxID=38544 RepID=A0A097IUW6_9FLOR)

HSP 1 Score: 72.0 bits (175), Expect = 9.980e-10
Identity = 31/57 (54.39%), Postives = 44/57 (77.19%), Query Frame = 0
Query:   38 WQRILEVHKSKKLVPFFDNSYQLFASENLDTSAWSTRMFVESGIEIFVAQSYGKDMG 94
            W+++L+V +  KLVPFFDN+YQ FAS +L   AWS R FV++G+++ V QSY K+MG
Sbjct:  206 WEQVLKVVQEGKLVPFFDNAYQGFASGSLQMDAWSVRRFVKAGLDMMVGQSYAKNMG 262          
BLAST of Ggra1215.t1 vs. uniprot
Match: A0A0E0NM66 (Aspartate aminotransferase n=11 Tax=Poaceae TaxID=4479 RepID=A0A0E0NM66_ORYRU)

HSP 1 Score: 72.0 bits (175), Expect = 1.100e-9
Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = 0
Query:   19 LNPTPELLTLKDCFKHCTDWQRILEVHKSKKLVPFFDNSYQLFASENLDTSAWSTRMFVESGIEIFVAQSYGKDMGTRDKAENVAELNM 107
            ++PTPE             W++I +V + KK +PFFD +YQ FAS +LD  A S R+FV+ G+E+FVAQSY K++G    AE +  +N+
Sbjct:  213 IDPTPE------------QWEKIADVIQEKKHMPFFDVAYQGFASGSLDEDASSVRLFVQRGLEVFVAQSYSKNLGLY--AERIGAINV 287          
The following BLAST results are available for this feature:
BLAST of Ggra1215.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A097IUY91.340e-1752.48Aspartate aminotransferase n=4 Tax=Grateloupia Tax... [more]
A0A097IUW41.830e-1461.43Aspartate aminotransferase n=2 Tax=Gracilariopsis ... [more]
A0A097IUW85.870e-1261.40Aspartate aminotransferase n=1 Tax=Gloiopeltis fur... [more]
A0A097IUV11.390e-1161.40Aspartate aminotransferase n=3 Tax=Gigartinaceae T... [more]
A0A097IUU72.560e-1057.89Aspartate aminotransferase n=1 Tax=Eucheuma dentic... [more]
A0A3L6QI485.680e-1043.82Aspartate aminotransferase n=5 Tax=Panicoideae Tax... [more]
A0A3L6RXD26.990e-1042.70Aspartate aminotransferase n=2 Tax=PACMAD clade Ta... [more]
A0A453PWZ97.740e-1041.57Aspartate aminotransferase n=1 Tax=Aegilops tausch... [more]
A0A097IUW69.980e-1054.39Aspartate aminotransferase n=1 Tax=Kappaphycus alv... [more]
A0A0E0NM661.100e-942.70Aspartate aminotransferase n=11 Tax=Poaceae TaxID=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015421Pyridoxal phosphate-dependent transferase, major domainGENE3D3.40.640.10coord: 36..94
e-value: 1.3E-14
score: 55.9
IPR004839Aminotransferase, class I/classIIPFAMPF00155Aminotran_1_2coord: 36..94
e-value: 1.0E-9
score: 38.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..295
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 352..375
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..295
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 505..529
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 505..602
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..222
IPR000796Aspartate/other aminotransferasePANTHERPTHR11879ASPARTATE AMINOTRANSFERASEcoord: 36..96
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 37..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000926_piloncontigtig00000926_pilon:73663..78480 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1215.t1Ggra1215.t1Gracilaria gracilis GNS1m malemRNAtig00000926_pilon 73663..78480 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1215.t1 ID=Ggra1215.t1|Name=Ggra1215.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=618bp
METWFHKPDDLQPKSVATLNPTPELLTLKDCFKHCTDWQRILEVHKSKKL
VPFFDNSYQLFASENLDTSAWSTRMFVESGIEIFVAQSYGKDMGTRDKAE
NVAELNMPRFAAITPKPTVLNSVTSAVNTMPPATVVPGKLPPATPSIILA
IEPSSHDDELNLSNAKRIVGADILSAGEQHGERSDDNHVEHVEIRGEQEE
EDTGDNVGDTPRRMRSKVDSSDGLSVVERGMVVTTLRKLRSTGSFEFKEK
TSSASQDENPNEGDLLAHKDSEEVGSQEATQFSQQASSTSSNASKFVQEQ
IGGVEEKPLVKPGHIAAANGASAGSVVRVRSLFGEDTSLVADAVRAHKLE
IREKRKSSAHSKDGAEAGGQSATDSEIVKANVEVLNGSLADDTESQRASA
TVFPSGEVKTVGSSWKLETSNVPDDVVIRSFSSALQVTELTLEAKPMNIE
ERDTSEQHRNEIVFESRSGETMTGNEHEEDSQCDKCHIHTGLSCDSAVHR
SADDNEARSKVQTTLEGAEAEEEGPKTIEPLEATKTINTAEEDEKQVRDT
ASTQAAGETSEAVKGEGSMAERVSQDQWSSGGRSDGDVIDGSSSGLVASS
DDLSQPVSHLVGSCLLI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015421PyrdxlP-dep_Trfase_major
IPR004839Aminotransferase_I/II
IPR000796Asp_trans
IPR015424PyrdxlP-dep_Trfase