Ggra1208.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra1208.t1
Unique Name	Ggra1208.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	510

Homology

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BLAST of Ggra1208.t1 vs. uniprot
Match: A0A2V3ICK7 (Uncharacterized protein n=5 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICK7_9FLOR)

HSP 1 Score: 135 bits (340), Expect = 7.000e-32
Identity = 74/184 (40.22%), Postives = 104/184 (56.52%), Query Frame = 0

Query:  273 EIVNLISDEEVEVKPFGTKLISSECP------KSKTLAAVEAAWKIWVLQLEKRRPGIFTGDEAKMKICSRARQGNSVYEGIGVTERNCLGARAALKAFRSTQNLKERSSRAEKELLTTISQFLRWCVANDSCSKMDVWKEETLFRCVGLSEVVEKFLMYFQKRCEEQTVRKKANNLMVVCEAA 450
            ++++L+S+ E E     T +   +C            +  EAAW+  +  L+K+ P IF   EA+M+I ++A+QG++VY GIGV   NC G R+ +      +     S R +KEL TT+SQFLRWCVAN +C K DVWK   LF  V    +VE FL YF +RC  +T   KA  L  +CEAA
Sbjct:  140 DVIDLVSEGESET---STGVKGEDCGGEPSNGNGNVTSRTEAAWRFRIKALKKKNPRIFDNKEARMEIRTKAKQGHTVYMGIGVDTSNCDGLRSVMDFVCCPEFNLNPSERWKKELRTTVSQFLRWCVANSACHKYDVWKRSALFENVSNKTLVETFLGYFLERCSTRTFYSKAEQLSAICEAA 320

The following BLAST results are available for this feature:

BLAST of Ggra1208.t1 vs. uniprot

BLAST of Ggra1208.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3ICK7	7.000e-32	40.22	Uncharacterized protein n=5 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..153

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000168_pilon	contig	tig00000168_pilon:320432..321961 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra1208.t1	Ggra1208.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000168_pilon 320432..321961 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra1208.t1 ID=Ggra1208.t1|Name=Ggra1208.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=510bp
MPFRHSVGQNTGAVFVSSSSESRNQVSFACRGAKNGQILFQSDDSDFISH
NARSYRNNRMDRDQSREDEKNDPFLNVGLGQRRRFGSDVNDSDEDDCASP
LPKFRQRRKRGLSWDGHTSDEDECFSPLPLPKPRQMRKRRSSWDGHDSEE
DDYVSPLPNAQQRRKGGSTLDLFDSDEDNYISPLPNARLGPKGRSGRRVH
DSDENDYIRRLPKVRRGRKRMPSCDDFSENGEALCQRRRLEGGNDERDVV
NTDGKDPISTSNAQQDRADRHFEIVNLISDEEVEVKPFGTKLISSECPKS
KTLAAVEAAWKIWVLQLEKRRPGIFTGDEAKMKICSRARQGNSVYEGIGV
TERNCLGARAALKAFRSTQNLKERSSRAEKELLTTISQFLRWCVANDSCS
KMDVWKEETLFRCVGLSEVVEKFLMYFQKRCEEQTVRKKANNLMVVCEAA
SASGWQNGILDVSMVLQVLCDKKSRATACRIQYEKVGWSFKRPFQRSRSK
LGRSKREVA*