Ggra1203.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1203.t1
Unique NameGgra1203.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length158
Homology
BLAST of Ggra1203.t1 vs. uniprot
Match: A0A2V3IQM2 (Tubulin-specific chaperone D n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQM2_9FLOR)

HSP 1 Score: 173 bits (438), Expect = 4.420e-47
Identity = 89/121 (73.55%), Postives = 101/121 (83.47%), Query Frame = 0
Query:    1 MQLFDERSEARADAALHGACLALAELVGRGLILPENALFAKEFDAVRIAASFDMRRGSNSVGAYVRDASFYKVWSIARAYESEQVAPFADVISDSMILLALLDSEVNFRRAAAAALEECVG 121
            MQLFD+R+EARADAALHGACLALAELV RGLILP + LF + FDAV  AA FDMRRG+NSVG+YVRDA+ Y VW+IARAY+   V  FA VI D+MI +ALLD EVN RRAAAAAL+ECVG
Sbjct:  367 MQLFDQRAEARADAALHGACLALAELVRRGLILPHHDLFKRAFDAVSTAACFDMRRGANSVGSYVRDAACYAVWAIARAYDKAHVELFAHVICDAMIPVALLDREVNCRRAAAAALQECVG 487          
BLAST of Ggra1203.t1 vs. uniprot
Match: A0A7S2SV11 (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV11_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.580e-25
Identity = 58/114 (50.88%), Postives = 73/114 (64.04%), Query Frame = 0
Query:    8 SEARADAALHGACLALAELVGRGLILPENALFAKEFDAVRIAASFDMRRGSNSVGAYVRDASFYKVWSIARAYESEQVAPFADVISDSMILLALLDSEVNFRRAAAAALEECVG 121
            S++  D A HG CLALAEL  RGL+LP      +    V  A  +D+RRGSNSVGA+VRDA+ Y  W+ ARAY    + P  D + + M+L AL D E+N RRAAAAA +E VG
Sbjct:   26 SDSEGDGAWHGGCLALAELARRGLLLPFR--LPEAVPVVAKAIQYDVRRGSNSVGAHVRDAACYVCWAFARAYSPAVMRPHVDKLCEGMLLAALFDREINCRRAAAAAFQENVG 137          
BLAST of Ggra1203.t1 vs. uniprot
Match: A0A077ZRQ3 (Tubulin-specific chaperone d n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A077ZRQ3_STYLE)

HSP 1 Score: 110 bits (276), Expect = 2.800e-25
Identity = 61/121 (50.41%), Postives = 77/121 (63.64%), Query Frame = 0
Query:    2 QLFDERSEARADAALHGACLALAELVGRGLILPEN-ALFAKEFDAVRIAASFDMRRGSNSVGAYVRDASFYKVWSIARAYESEQVAPFADVISDSMILLALLDSEVNFRRAAAAALEECVG 121
            QLFD   +   D++ HG CLALAEL  RGL+LPE  A F    D   I   +D+ RG++SVGA VRDA+ Y VWS ARAY  E + P    +S  +I+ +L D EVN RRAA+A  +ECVG
Sbjct:  452 QLFDLFDDNETDSSWHGGCLALAELCRRGLLLPERLARFTPTLDKALI---YDINRGNHSVGANVRDAACYVVWSFARAYAPEIMKPHVHTLSTQLIVESLFDREVNCRRAASATFQECVG 569          
BLAST of Ggra1203.t1 vs. uniprot
Match: J9ET11 (Tubulin folding cofactor D n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9ET11_9SPIT)

HSP 1 Score: 108 bits (271), Expect = 1.320e-24
Identity = 58/120 (48.33%), Postives = 76/120 (63.33%), Query Frame = 0
Query:    2 QLFDERSEARADAALHGACLALAELVGRGLILPENALFAKEFDAVRIAASFDMRRGSNSVGAYVRDASFYKVWSIARAYESEQVAPFADVISDSMILLALLDSEVNFRRAAAAALEECVG 121
            QLFD   +   +++ HG CLALAEL  RGL+LPE     K    +  A  +D+ RG+ SVGA+VRDA+ Y VWS ARAY  E + P    +S  +I+ +L D EVN RRAA+A  +ECVG
Sbjct:  457 QLFDLFDDNETESSWHGGCLALAELCRRGLLLPER--LTKFIPTLDKALVYDINRGNYSVGAHVRDAACYVVWSFARAYTPEIMKPHVHTLSTQLIVESLFDREVNCRRAASATFQECVG 574          
BLAST of Ggra1203.t1 vs. uniprot
Match: A0A1S8VAR0 (Uncharacterized protein (Fragment) n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VAR0_9FUNG)

HSP 1 Score: 105 bits (263), Expect = 2.060e-24
Identity = 53/111 (47.75%), Postives = 80/111 (72.07%), Query Frame = 0
Query:   12 ADAALHGACLALAELVGRGLILPENALFAKE-FDAVRIAASFDMRRGSNSVGAYVRDASFYKVWSIARAYESEQVAPFADVISDSMILLALLDSEVNFRRAAAAALEECVG 121
            +DA+ HG+CLALAEL+ RGL+LP+     KE    +    +FD R+G +SVG++VRDA+ Y  WS+ARAY  + +AP+A  ++ S+++++L D E+N RRA+AAA +E VG
Sbjct:   16 SDASWHGSCLALAELIRRGLLLPDRL---KECIPWILRGLTFDQRKGKHSVGSHVRDAACYVCWSLARAYAPDVLAPYAMELAQSLVVVSLTDREINIRRASAAAFQENVG 123          
BLAST of Ggra1203.t1 vs. uniprot
Match: A0A836BXK6 (TFCD_C domain-containing protein n=2 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BXK6_9CHLO)

HSP 1 Score: 107 bits (268), Expect = 3.330e-24
Identity = 55/110 (50.00%), Postives = 74/110 (67.27%), Query Frame = 0
Query:   12 ADAALHGACLALAELVGRGLILPENALFAKEFDAVRIAASFDMRRGSNSVGAYVRDASFYKVWSIARAYESEQVAPFADVISDSMILLALLDSEVNFRRAAAAALEECVG 121
            +DAA HG CLALAEL  RGL+LPE          VR A  +D+RRG +S+GA+VRDA+ Y  W+ ARAYE + +     +++ S++ +A  D EVN RRAA+AA +ECVG
Sbjct:  432 SDAAWHGGCLALAELARRGLLLPER--LPAIIPLVREALHYDVRRGPHSIGAHVRDAAAYVCWAFARAYEPQLLEGSVTLLASSLLTIACYDREVNCRRAASAAFQECVG 539          
BLAST of Ggra1203.t1 vs. uniprot
Match: C1MTP3 (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MTP3_MICPC)

HSP 1 Score: 107 bits (267), Expect = 4.560e-24
Identity = 57/110 (51.82%), Postives = 72/110 (65.45%), Query Frame = 0
Query:   12 ADAALHGACLALAELVGRGLILPENALFAKEFDAVRIAASFDMRRGSNSVGAYVRDASFYKVWSIARAYESEQVAPFADVISDSMILLALLDSEVNFRRAAAAALEECVG 121
            +DA  HGACLALAEL  RGL+LP  A        V  A S+D+RRG +SVGA+VRDA+ Y  W+ ARAY  E + P A  +   +++ A  D EVN RRAA+AA +ECVG
Sbjct:  506 SDATWHGACLALAELSRRGLLLP--ARLPDAVPHVATALSYDVRRGPHSVGAHVRDAAAYVCWAFARAYAPEVLTPHAPALGPPLLVTACFDREVNCRRAASAAFQECVG 613          
BLAST of Ggra1203.t1 vs. uniprot
Match: A0A0G4I9A1 (TFCD_C domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I9A1_9ALVE)

HSP 1 Score: 106 bits (264), Expect = 1.170e-23
Identity = 56/109 (51.38%), Postives = 74/109 (67.89%), Query Frame = 0
Query:   13 DAALHGACLALAELVGRGLILPENALFAKEFDAVRIAASFDMRRGSNSVGAYVRDASFYKVWSIARAYESEQVAPFADVISDSMILLALLDSEVNFRRAAAAALEECVG 121
            + A HG CLA+ ELV RGL+LP+    A+    VR+A  FD+RRGS++ GA VRDA  +  W++ARAY+   +  F + +S S+I  AL D EVN RRAAAAAL+E VG
Sbjct:  465 EGAWHGGCLAVGELVRRGLVLPDQ--LAEVVSHVRLALEFDVRRGSHNSGAGVRDAGCFVCWALARAYKPSDLKMFMEDLSHSLIQTALFDREVNCRRAAAAALQELVG 571          
BLAST of Ggra1203.t1 vs. uniprot
Match: A0A7S0UCR8 (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UCR8_HEMAN)

HSP 1 Score: 102 bits (255), Expect = 2.100e-23
Identity = 55/109 (50.46%), Postives = 71/109 (65.14%), Query Frame = 0
Query:   13 DAALHGACLALAELVGRGLILPENALFAKEFDAVRIAASFDMRRGSNSVGAYVRDASFYKVWSIARAYESEQVAPFADVISDSMILLALLDSEVNFRRAAAAALEECVG 121
            D A HGACLALAEL  RGL+LP      +    V     +D+RRGS SVGA+VRDA+ Y  W++ARAY  E +AP+   ++  +I+ A  D EVN RRAA+AA +E VG
Sbjct:   63 DGACHGACLALAELARRGLLLPPR--LPQAVPHVLSCLRYDVRRGSASVGAHVRDAACYVCWALARAYAPEVMAPYVQDLARGLIVCAAYDREVNCRRAASAAFQEHVG 169          
BLAST of Ggra1203.t1 vs. uniprot
Match: A0A7S0KMM1 (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KMM1_9CHLO)

HSP 1 Score: 105 bits (262), Expect = 2.120e-23
Identity = 53/110 (48.18%), Postives = 76/110 (69.09%), Query Frame = 0
Query:   12 ADAALHGACLALAELVGRGLILPENALFAKEFDAVRIAASFDMRRGSNSVGAYVRDASFYKVWSIARAYESEQVAPFADVISDSMILLALLDSEVNFRRAAAAALEECVG 121
            +D+  HGACLALAEL  RGL+LP     A+    V  A ++D+RRG +SVG++VRDA+ Y  W+ ARAY  +  AP+ + I+ +++++A  D EVN RRAA+AA +E VG
Sbjct:  385 SDSTWHGACLALAELARRGLLLPSR--LAETIPLVVEALTYDVRRGPHSVGSHVRDAACYVCWAFARAYAPDVFAPYVNEIAPTLLMVACFDREVNCRRAASAAFQESVG 492          
The following BLAST results are available for this feature:
BLAST of Ggra1203.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQM24.420e-4773.55Tubulin-specific chaperone D n=1 Tax=Gracilariopsi... [more]
A0A7S2SV111.580e-2550.88Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A077ZRQ32.800e-2550.41Tubulin-specific chaperone d n=1 Tax=Stylonychia l... [more]
J9ET111.320e-2448.33Tubulin folding cofactor D n=1 Tax=Oxytricha trifa... [more]
A0A1S8VAR02.060e-2447.75Uncharacterized protein (Fragment) n=1 Tax=Batrach... [more]
A0A836BXK63.330e-2450.00TFCD_C domain-containing protein n=2 Tax=Edaphochl... [more]
C1MTP34.560e-2451.82Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A0G4I9A11.170e-2351.38TFCD_C domain-containing protein n=1 Tax=Chromera ... [more]
A0A7S0UCR82.100e-2350.46Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0KMM12.120e-2348.18Hypothetical protein n=1 Tax=Ostreococcus mediterr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033162Tubulin-folding cofactor DPANTHERPTHR12658BETA-TUBULIN COFACTOR Dcoord: 8..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000168_piloncontigtig00000168_pilon:159998..160902 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1203.t1Ggra1203.t1Gracilaria gracilis GNS1m malemRNAtig00000168_pilon 159998..160902 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1203.t1 ID=Ggra1203.t1|Name=Ggra1203.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=158bp
MQLFDERSEARADAALHGACLALAELVGRGLILPENALFAKEFDAVRIAA
SFDMRRGSNSVGAYVRDASFYKVWSIARAYESEQVAPFADVISDSMILLA
LLDSEVNFRRAAAAALEECVGNTVMVMGEVAYRRRPGKGGNTGPRATEAA
ESSLIAD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033162TBCD