Ggra1200.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1200.t1
Unique NameGgra1200.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length575
Homology
BLAST of Ggra1200.t1 vs. uniprot
Match: A0A2V3ICK7 (Uncharacterized protein n=5 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICK7_9FLOR)

HSP 1 Score: 142 bits (359), Expect = 3.550e-34
Identity = 98/253 (38.74%), Postives = 132/253 (52.17%), Query Frame = 0
Query:  319 LDAERRSSSVMEL-------HSDGDSVEMFEVGRNHRTSRGKKSGCDRGGAPRARQLGIERERLQGSGRVEVTASATDAKMEWRIRLKELGKAKPDVFDGPEALLQIRTRARRGKPVYSGIGVTVRNCLGLGKVLATFNLFYKSSFARPEKTKKDLITTVSQFLRWCVSSSSCGKFDVWKPKALFGNITKMAVVEPFIEYFEARCEKRTVREKATYLIIIGDSACSYDCGRWTKEINDVSTMLQYYGGRKRNV 564
            L+ ER   SV  +        SD D +++   G +  TS G K G D GG P             G+G V    S T+A   WR R+K L K  P +FD  EA ++IRT+A++G  VY GIGV   NC GL  V+  F    + +    E+ KK+L TTVSQFLRWCV++S+C K+DVWK  ALF N++   +VE F+ YF  RC  RT   KA  L  I ++A          ++ +V  +L   G R R V
Sbjct:  116 LETERVRDSVEHVTEMESGTQSDSDVIDLVSEGESE-TSTGVK-GEDCGGEP-----------SNGNGNV---TSRTEAA--WRFRIKALKKKNPRIFDNKEARMEIRTKAKQGHTVYMGIGVDTSNCDGLRSVM-DFVCCPEFNLNPSERWKKELRTTVSQFLRWCVANSACHKYDVWKRSALFENVSNKTLVETFLGYFLERCSTRTFYSKAEQLSAICEAARPTLNESQRGKLGEVIAILDSIGHRTRAV 349          
BLAST of Ggra1200.t1 vs. uniprot
Match: A0A2V3IBT3 (Uncharacterized protein n=4 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBT3_9FLOR)

HSP 1 Score: 87.0 bits (214), Expect = 2.500e-14
Identity = 55/150 (36.67%), Postives = 76/150 (50.67%), Query Frame = 0
Query:  394 WRIRLKELGKAKPDVFDGPEALLQIRTRARRGKPVYSGIGVTVRNCLGLGKVLATFNLFYKSSFARPEKTKKDLITTVSQFLRWCVSSSSCGKFDVWKPKALFGNITKMAVVEPFIEYFEARCEKRTVREKATYL--------IIIGDSA 535
            W  +L+ L K  P +F+    LL++R  A  G   + GIG TV+NCLGL +V  T+      +  +       L TTVSQFLRW + +S+C + DVWK   LF  +    VV  FIE    R    TV+ + T +        II GD+A
Sbjct:  138 WYEQLRHLEKCHPKLFE----LLEVRD-AGPGTFYFKGIGATVKNCLGLRRVYETYYKPRLQNNGKGAAAFTHLSTTVSQFLRWAICTSTCSRKDVWKEHVLFRALADQKVVNRFIEMLMLRSSPGTVKNRITSMKRVCDVGVIISGDTA 282          
The following BLAST results are available for this feature:
BLAST of Ggra1200.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ICK73.550e-3438.74Uncharacterized protein n=5 Tax=Gracilariopsis cho... [more]
A0A2V3IBT32.500e-1436.67Uncharacterized protein n=4 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000168_piloncontigtig00000168_pilon:99471..101195 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1200.t1Ggra1200.t1Gracilaria gracilis GNS1m malemRNAtig00000168_pilon 99471..101195 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1200.t1 ID=Ggra1200.t1|Name=Ggra1200.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=575bp
MKHKKWSPGSKLKTSDDEYRGRTGTKRRLSSWEEEDVIELLTPKKRRVLD
NPDPRRNRSARVLDSSESECVEVFEFGKRRGGLLVNKGIRGRGGASLDRQ
SSMRKLRCAERGGQSASRRASSEFAVKDMSLSKRRGRTKMCERRSSSIVE
LHSDDDSGQVLDVGRNQRTPRSRKLGCGKSEGSRARQLGTGMGRLQCTGT
AGGITSSAASSSDFVTDGYTKTFNGAGDLDAERRSSSIIDLDSDGDSVEM
FDVGRNHGTPGGRKLGRGRGEGSRARQLGTGTGKLQRTGTAGGITSSAAS
SFDSVTDDYTKTYNGAEDLDAERRSSSVMELHSDGDSVEMFEVGRNHRTS
RGKKSGCDRGGAPRARQLGIERERLQGSGRVEVTASATDAKMEWRIRLKE
LGKAKPDVFDGPEALLQIRTRARRGKPVYSGIGVTVRNCLGLGKVLATFN
LFYKSSFARPEKTKKDLITTVSQFLRWCVSSSSCGKFDVWKPKALFGNIT
KMAVVEPFIEYFEARCEKRTVREKATYLIIIGDSACSYDCGRWTKEINDV
STMLQYYGGRKRNVGNMPPPARCR*
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