Ggra1179.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1179.t1
Unique NameGgra1179.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length221
Homology
BLAST of Ggra1179.t1 vs. uniprot
Match: A0A2V3J1Y9 (rRNA 2'-O-methyltransferase fibrillarin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Y9_9FLOR)

HSP 1 Score: 417 bits (1073), Expect = 1.540e-145
Identity = 206/220 (93.64%), Postives = 215/220 (97.73%), Query Frame = 0
Query:    1 MVVGESVYGEKRVQVEVTRKEGDTDVKDKIEYRFWSPFRSKLAAGIVGGLDNCWIKPGGKVLYLGAASGTTVSHVSDVVGPSGVVYAVEFSPRSGRDLVNLAKKRTNIVPIIEDARHPAKYRMLVGMVDVIFADVAQPDQARIVGINAQFYLKTGGHYMISIKANCIDSTAPAAAVFANEVDKLRGMSLKPMEQLSLEPYERDHCVVVGVYKRKKKQITS 220
            MV+G+SVYGEKRVQVEVTRK+G+ D+KDKIEYRFWSPFRSKLAA IVGG+DNCWIKPG KVLYLGAASGTTVSHVSDVVGP+GVVYAVEFSPRSGRDLVNLAKKRTNIVPIIEDARHPAKYRMLV MVDVIFADVAQPDQARIVGINAQFYLKTGGHYMISIKANCIDSTAPAAAVFA+EVDKLRGMSLKP+EQLSLEPYERDHCVVVGVYKRKKKQI S
Sbjct:  115 MVMGDSVYGEKRVQVEVTRKDGENDIKDKIEYRFWSPFRSKLAASIVGGIDNCWIKPGAKVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSPRSGRDLVNLAKKRTNIVPIIEDARHPAKYRMLVSMVDVIFADVAQPDQARIVGINAQFYLKTGGHYMISIKANCIDSTAPAAAVFASEVDKLRGMSLKPLEQLSLEPYERDHCVVVGVYKRKKKQIPS 334          
BLAST of Ggra1179.t1 vs. uniprot
Match: R7QLK0 (rRNA 2'-O-methyltransferase fibrillarin 2 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLK0_CHOCR)

HSP 1 Score: 390 bits (1001), Expect = 1.550e-134
Identity = 195/224 (87.05%), Postives = 208/224 (92.86%), Query Frame = 0
Query:    1 MVVGESVYGEKRVQVE----VTRKEGDTDVKDKIEYRFWSPFRSKLAAGIVGGLDNCWIKPGGKVLYLGAASGTTVSHVSDVVGPSGVVYAVEFSPRSGRDLVNLAKKRTNIVPIIEDARHPAKYRMLVGMVDVIFADVAQPDQARIVGINAQFYLKTGGHYMISIKANCIDSTAPAAAVFANEVDKLRGMSLKPMEQLSLEPYERDHCVVVGVYKRKKKQITS 220
            MVVGESVYGEKRVQVE    +  + G T  K+KIEYRFWSPFRSKLAAGIVGG+D CWI PG KVLYLGAASGTTVSHVSDVVGP+GVVYAVEFSPRSGRDLVNLAKKRTNIVPIIEDARHPAKYRMLVGMVDVIFADVAQPDQARIVGINAQFYLKTGGHYMISIKANCIDSTAPA AVFA EV+KLRGMSLKP+EQL+LEPYERDHC+VVGVYK+KKK +++
Sbjct:  114 MVVGESVYGEKRVQVETAAPMAEQNGATVAKEKIEYRFWSPFRSKLAAGIVGGIDKCWITPGAKVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSPRSGRDLVNLAKKRTNIVPIIEDARHPAKYRMLVGMVDVIFADVAQPDQARIVGINAQFYLKTGGHYMISIKANCIDSTAPAEAVFAAEVEKLRGMSLKPVEQLTLEPYERDHCIVVGVYKKKKKDMSA 337          
BLAST of Ggra1179.t1 vs. uniprot
Match: A0A5B8MPB2 (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MPB2_9CHLO)

HSP 1 Score: 321 bits (822), Expect = 9.280e-109
Identity = 162/217 (74.65%), Postives = 182/217 (83.87%), Query Frame = 0
Query:    1 MVVGESVYGEKRVQVEVTRKEGDTDVKDKIEYRFWSPFRSKLAAGIVGGLDNCWIKPGGKVLYLGAASGTTVSHVSDVVGPSGVVYAVEFSPRSGRDLVNLAKKRTNIVPIIEDARHPAKYRMLVGMVDVIFADVAQPDQARIVGINAQFYLKTGGHYMISIKANCIDSTAPAAAVFANEVDKLRGMSLKPMEQLSLEPYERDHCVVVGVYKRKKKQ 217
            MV GESVYGEKRV VE    EGD     K+EYR W+PFRSKL AGI+GGLD+ W+KPG KVLYLGAASGTTVSHVSD+VGP GVVYAVEFS RSGRDLVN+AKKR NIVPIIEDARHPAKYRM+VGMVD +FADVAQPDQARIV IN+ ++LK  GH++ISIKANCIDST PA AVFA EV KL+  + KP EQL+LEPYERDH +VVG Y+  KK+
Sbjct:   32 MVPGESVYGEKRVSVE---NEGD-----KVEYRVWNPFRSKLGAGILGGLDSIWMKPGSKVLYLGAASGTTVSHVSDIVGPEGVVYAVEFSHRSGRDLVNMAKKRPNIVPIIEDARHPAKYRMIVGMVDCVFADVAQPDQARIVAINSHYFLKNEGHFVISIKANCIDSTVPAEAVFAREVKKLQEENFKPSEQLTLEPYERDHAIVVGGYRMPKKK 240          
BLAST of Ggra1179.t1 vs. uniprot
Match: M2XYF4 (Fibrillarin-like pre-rRNA processing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XYF4_GALSU)

HSP 1 Score: 323 bits (828), Expect = 1.780e-108
Identity = 162/217 (74.65%), Postives = 187/217 (86.18%), Query Frame = 0
Query:    1 MVVGESVYGEKRVQVEVTRKEGDTDVKDKIEYRFWSPFRSKLAAGIVGGLDNCWIKPGGKVLYLGAASGTTVSHVSDVVGPSGVVYAVEFSPRSGRDLVNLAKKRTNIVPIIEDARHPAKYRMLVGMVDVIFADVAQPDQARIVGINAQFYLKTGGHYMISIKANCIDSTAPAAAVFANEVDKLRGMSLKPMEQLSLEPYERDHCVVVGVYKRKKKQ 217
            MV GESVYGEKRV VEV     D  VK+KIEYR W+PFRSKLAA I+GG+DN  IKPG KVLYLGAASGTTVSHVSD++G  G+VYAVEFS RSGRDL+NLAK+RTNIVPIIEDAR+PA+YRMLVGMVDVIFADVAQPDQARIV INA  +LKTGGH++ISIKANC+DST   A VFA EV+KL+  +L+P+EQ++LEPYERDH V+VGVY+  KK+
Sbjct:   94 MVTGESVYGEKRVSVEV-ENPNDPLVKEKIEYRIWNPFRSKLAAAILGGVDNIHIKPGCKVLYLGAASGTTVSHVSDIIGADGIVYAVEFSQRSGRDLLNLAKRRTNIVPIIEDARYPARYRMLVGMVDVIFADVAQPDQARIVAINAHQFLKTGGHFVISIKANCVDSTVEPALVFAREVEKLKQENLRPIEQITLEPYERDHAVIVGVYRPTKKK 309          
BLAST of Ggra1179.t1 vs. uniprot
Match: A0A388L111 (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388L111_CHABU)

HSP 1 Score: 320 bits (820), Expect = 2.380e-108
Identity = 160/217 (73.73%), Postives = 180/217 (82.95%), Query Frame = 0
Query:    1 MVVGESVYGEKRVQVEVTRKEGDTDVKDKIEYRFWSPFRSKLAAGIVGGLDNCWIKPGGKVLYLGAASGTTVSHVSDVVGPSGVVYAVEFSPRSGRDLVNLAKKRTNIVPIIEDARHPAKYRMLVGMVDVIFADVAQPDQARIVGINAQFYLKTGGHYMISIKANCIDSTAPAAAVFANEVDKLRGMSLKPMEQLSLEPYERDHCVVVGVYKRKKKQ 217
            MV GESVYGEKR+ V     EG+   K  +EYR W+PFRSKLAA ++GG+DN WIKPG  VLYLGAASGTTVSHVSD+VGP+GVVYAVEFS RSGRDLVN+AKKRTN++PIIEDARHP +YRMLVGMVDVIFADVAQPDQARIV +NA  +LK GGH++ISIKANCIDST PA AVFA EV KL+    KP EQL+LEPYERDH  VVG Y+  KKQ
Sbjct:   32 MVTGESVYGEKRISV-----EGEDGTK--VEYRVWNPFRSKLAAAVLGGVDNIWIKPGSHVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPTRYRMLVGMVDVIFADVAQPDQARIVALNAHHFLKNGGHFVISIKANCIDSTVPAEAVFAREVKKLQQEQFKPSEQLTLEPYERDHACVVGGYRMPKKQ 241          
BLAST of Ggra1179.t1 vs. uniprot
Match: A0A0A0L9V7 (Uncharacterized protein n=14 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0L9V7_CUCSA)

HSP 1 Score: 322 bits (824), Expect = 4.840e-108
Identity = 159/217 (73.27%), Postives = 185/217 (85.25%), Query Frame = 0
Query:    1 MVVGESVYGEKRVQVEVTRKEGDTDVKDKIEYRFWSPFRSKLAAGIVGGLDNCWIKPGGKVLYLGAASGTTVSHVSDVVGPSGVVYAVEFSPRSGRDLVNLAKKRTNIVPIIEDARHPAKYRMLVGMVDVIFADVAQPDQARIVGINAQFYLKTGGHYMISIKANCIDSTAPAAAVFANEVDKLRGMSLKPMEQLSLEPYERDHCVVVGVYKRKKKQ 217
            MV GESVY EKRV V+    E  T    KIEYR W+PFRSKLAA ++GG+D+ WIKPG +VLYLGAASGTTVSHVSDVVGPSG+VYAVEFS RSGRDLVN+AKKRTN++PIIEDARHPAKYRMLVGMVDVIF+DVAQPDQARI+ +NA ++LK GGH++ISIKANCIDST PA AVFA+EV+KL+    KP EQ++LEP+ERDH  VVG+Y+  KKQ
Sbjct:   94 MVTGESVYNEKRVSVQ---NEDGT----KIEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQ 303          
BLAST of Ggra1179.t1 vs. uniprot
Match: I3SKZ0 (Uncharacterized protein n=1 Tax=Lotus japonicus TaxID=34305 RepID=I3SKZ0_LOTJA)

HSP 1 Score: 318 bits (816), Expect = 9.340e-108
Identity = 158/217 (72.81%), Postives = 184/217 (84.79%), Query Frame = 0
Query:    1 MVVGESVYGEKRVQVEVTRKEGDTDVKDKIEYRFWSPFRSKLAAGIVGGLDNCWIKPGGKVLYLGAASGTTVSHVSDVVGPSGVVYAVEFSPRSGRDLVNLAKKRTNIVPIIEDARHPAKYRMLVGMVDVIFADVAQPDQARIVGINAQFYLKTGGHYMISIKANCIDSTAPAAAVFANEVDKLRGMSLKPMEQLSLEPYERDHCVVVGVYKRKKKQ 217
            +V GE+VY EKRV V+   KE  T    K EYR W+PFRSKLAA I+GG+DN WIKPG KVLYLGAASGTTVSHVSD+VGP+GVVYAVEFS RSGRDLVN+AKKRTN++PIIEDARHPAKYRMLVGMVDV+F+DVAQPDQARI+G+NA ++LKTGGH++ISIKANCIDST PA  VF NEV+KL+    KP EQ++LEP+ERDH  VVG Y+  KK+
Sbjct:   33 LVPGEAVYNEKRVTVQ---KEDGT----KEEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVAQPDQARILGLNASYFLKTGGHFVISIKANCIDSTVPAETVFVNEVNKLKADQFKPAEQVTLEPFERDHACVVGGYRLSKKK 242          
BLAST of Ggra1179.t1 vs. uniprot
Match: A0A6I9RVM9 (mediator of RNA polymerase II transcription subunit 36a n=16 Tax=Petrosaviidae TaxID=1437197 RepID=A0A6I9RVM9_ELAGV)

HSP 1 Score: 320 bits (821), Expect = 1.290e-107
Identity = 160/217 (73.73%), Postives = 183/217 (84.33%), Query Frame = 0
Query:    1 MVVGESVYGEKRVQVEVTRKEGDTDVKDKIEYRFWSPFRSKLAAGIVGGLDNCWIKPGGKVLYLGAASGTTVSHVSDVVGPSGVVYAVEFSPRSGRDLVNLAKKRTNIVPIIEDARHPAKYRMLVGMVDVIFADVAQPDQARIVGINAQFYLKTGGHYMISIKANCIDSTAPAAAVFANEVDKLRGMSLKPMEQLSLEPYERDHCVVVGVYKRKKKQ 217
            MVVGESVYGEKR+ V+    E  T    K+EYR W+PFRSKLAA I+GG+DN WI PG +VLYLGAASGTTVSHVSD+VGP+GVVYAVEFS RSGRDLVN+AKKRTN++PIIEDARHPA+YRMLVGMVDVIFADVAQPDQARIV +NA ++LK GGH++ISIKANCIDST PA AVFA EV KL+    KP EQ++LEP+ERDH  VVG Y+  KKQ
Sbjct:   94 MVVGESVYGEKRISVQ---NEDGT----KVEYRVWNPFRSKLAAAILGGVDNIWIAPGTRVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPARYRMLVGMVDVIFADVAQPDQARIVALNASYFLKNGGHFVISIKANCIDSTVPAEAVFAQEVKKLQAEQFKPSEQVTLEPFERDHACVVGGYRMPKKQ 303          
BLAST of Ggra1179.t1 vs. uniprot
Match: F0WG01 (rRNA 2'Omethyltransferase fibrillarin putative n=3 Tax=Oomycota TaxID=4762 RepID=F0WG01_9STRA)

HSP 1 Score: 321 bits (822), Expect = 1.360e-107
Identity = 157/217 (72.35%), Postives = 180/217 (82.95%), Query Frame = 0
Query:    4 GESVYGEKRVQVEVTRKEGDTDVKDKIEYRFWSPFRSKLAAGIVGGLDNCWIKPGGKVLYLGAASGTTVSHVSDVVGPSGVVYAVEFSPRSGRDLVNLAKKRTNIVPIIEDARHPAKYRMLVGMVDVIFADVAQPDQARIVGINAQFYLKTGGHYMISIKANCIDSTAPAAAVFANEVDKLRGMSLKPMEQLSLEPYERDHCVVVGVYKRKKKQITS 220
            G+SVYGEKR+ VEV    G+    +K+EYR W+PFRSKLAA I+GG+DN WI PG KVLYLG ASGTTVSHVSD+VGPSG VYAVEFSPRSGRDL+N+AK RTNI+PIIEDARHP KYRMLV MVD +FADVAQPDQARIV +N+ +YLK GGH++ISIKA+CIDSTAPA AVFA EV KL+    KP EQL+LEPYERDH VVVG Y+  KK+ T 
Sbjct:  105 GKSVYGEKRISVEVALASGEGT--EKVEYRVWNPFRSKLAAAILGGVDNIWITPGSKVLYLGGASGTTVSHVSDIVGPSGAVYAVEFSPRSGRDLINVAKSRTNIIPIIEDARHPLKYRMLVPMVDTVFADVAQPDQARIVALNSSYYLKNGGHFVISIKASCIDSTAPAEAVFAREVKKLQKEQFKPAEQLTLEPYERDHAVVVGSYRAPKKEKTQ 319          
BLAST of Ggra1179.t1 vs. uniprot
Match: R0GMR7 (Uncharacterized protein n=3 Tax=Camelineae TaxID=980083 RepID=R0GMR7_9BRAS)

HSP 1 Score: 320 bits (821), Expect = 5.920e-107
Identity = 161/217 (74.19%), Postives = 182/217 (83.87%), Query Frame = 0
Query:    1 MVVGESVYGEKRVQVEVTRKEGDTDVKDKIEYRFWSPFRSKLAAGIVGGLDNCWIKPGGKVLYLGAASGTTVSHVSDVVGPSGVVYAVEFSPRSGRDLVNLAKKRTNIVPIIEDARHPAKYRMLVGMVDVIFADVAQPDQARIVGINAQFYLKTGGHYMISIKANCIDSTAPAAAVFANEVDKLRGMSLKPMEQLSLEPYERDHCVVVGVYKRKKKQ 217
            +V GE+VY EKR+ V+    E  T    K+EYR W+PFRSKLAA I+GG+DN WIKPG KVLYLGAASGTTVSHVSDVVGP G VYAVEFSPRSGRDLVN+AKKRTN+VPIIEDARHPAKYRMLVGMVDVIF+DVAQPDQARIV +NA F+LKTGGH++ISIKANCIDST PA AVF +EV KL+    KP EQ++LEP+ERDH  VVG Y+  KKQ
Sbjct:  139 LVPGEAVYNEKRISVQ---NEDGT----KVEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDVVGPEGCVYAVEFSPRSGRDLVNMAKKRTNVVPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARIVALNASFFLKTGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQEQFKPAEQVTLEPFERDHACVVGGYRMPKKQ 348          
The following BLAST results are available for this feature:
BLAST of Ggra1179.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1Y91.540e-14593.64rRNA 2'-O-methyltransferase fibrillarin n=1 Tax=Gr... [more]
R7QLK01.550e-13487.05rRNA 2'-O-methyltransferase fibrillarin 2 n=1 Tax=... [more]
A0A5B8MPB29.280e-10974.65Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
M2XYF41.780e-10874.65Fibrillarin-like pre-rRNA processing protein n=1 T... [more]
A0A388L1112.380e-10873.73Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A0A0L9V74.840e-10873.27Uncharacterized protein n=14 Tax=Cucurbitaceae Tax... [more]
I3SKZ09.340e-10872.81Uncharacterized protein n=1 Tax=Lotus japonicus Ta... [more]
A0A6I9RVM91.290e-10773.73mediator of RNA polymerase II transcription subuni... [more]
F0WG011.360e-10772.35rRNA 2'Omethyltransferase fibrillarin putative n=3... [more]
R0GMR75.920e-10774.19Uncharacterized protein n=3 Tax=Camelineae TaxID=9... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000692FibrillarinPRINTSPR00052FIBRILLARINcoord: 58..79
score: 80.84
coord: 108..137
score: 71.19
coord: 31..50
score: 69.29
coord: 190..211
score: 61.69
coord: 83..100
score: 70.63
coord: 138..167
score: 60.48
IPR000692FibrillarinSMARTSM01206Fibrillarin_2coord: 2..213
e-value: 1.0E-140
score: 483.5
IPR000692FibrillarinPIRSFPIRSF006540Nop17pcoord: 1..215
e-value: 1.1E-103
score: 343.8
IPR000692FibrillarinPFAMPF01269Fibrillarincoord: 1..212
e-value: 8.5E-96
score: 319.4
IPR000692FibrillarinHAMAPMF_00351RNA_methyltransf_FlpAcoord: 1..212
score: 35.234421
NoneNo IPR availableGENE3D3.30.200.20Phosphorylase Kinase; domain 1coord: 1..35
e-value: 3.1E-6
score: 29.0
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 36..213
e-value: 3.1E-81
score: 273.2
NoneNo IPR availablePANTHERPTHR10335RRNA 2-O-METHYLTRANSFERASE FIBRILLARINcoord: 1..219
NoneNo IPR availablePANTHERPTHR10335:SF18BNAA02G10840D PROTEINcoord: 1..219
IPR020813Fibrillarin, conserved sitePROSITEPS00566FIBRILLARINcoord: 83..97
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 7..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000237_piloncontigtig00000237_pilon:93614..94276 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1179.t1Ggra1179.t1Gracilaria gracilis GNS1m malemRNAtig00000237_pilon 93614..94276 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1179.t1 ID=Ggra1179.t1|Name=Ggra1179.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=221bp
MVVGESVYGEKRVQVEVTRKEGDTDVKDKIEYRFWSPFRSKLAAGIVGGL
DNCWIKPGGKVLYLGAASGTTVSHVSDVVGPSGVVYAVEFSPRSGRDLVN
LAKKRTNIVPIIEDARHPAKYRMLVGMVDVIFADVAQPDQARIVGINAQF
YLKTGGHYMISIKANCIDSTAPAAAVFANEVDKLRGMSLKPMEQLSLEPY
ERDHCVVVGVYKRKKKQITS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000692Fibrillarin
IPR020813Fibrillarin_CS
IPR029063SAM-dependent_MTases