Ggra1176.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1176.t1
Unique NameGgra1176.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length494
Homology
BLAST of Ggra1176.t1 vs. uniprot
Match: A0A2V3J246 (Serine protease 56 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J246_9FLOR)

HSP 1 Score: 284 bits (727), Expect = 2.900e-89
Identity = 166/323 (51.39%), Postives = 208/323 (64.40%), Query Frame = 0
Query:   57 LNSSSYVQWRRSNFSAAPRYVRQHSTLNGSSGGGGDGDGSAVRLAPTNVFDNGQFALVIRAASARHAQCFGGA-QSPALRPAHAVFEPMPTPCAIRADEPSAAARAPKIVGGSAVGAPPNSLASFGWMALIWEAEAXXXXXXXXXXXXAQTTDARPICGGSHFRRGFVATAAHCVAARAHAPQLLRVSIGAVPAQAQRAQLLRVRAVHTHPQYETLPSNEALFDVAVLELQDDARTNHTIALNDDARAPAAGAFVTAAGFGYISEQWPALPQPNRLLRVDVPVVPTARCQAAFRAVRADAHLCAGYAAGGCDSCQADSGGPLR 378
            + S  YV+W+R NFS  P+Y  ++S LNG+S GG     + VRL  TN+F+ G FAL +RA +    QCFG   Q PA +    VFE MP  C IRA EP+ +   P+IVGGS V    NS +SFGWMALIWE +                 + RPICGG+ F  G+VATAAHC+   A  PQ  RVS+G   A+ QR  ++R+   + HP+YETL SNEA++DVAVL+L+    ++  I LN  ++ P AG FVTAAG+GYISEQW ALP PNRL RVDVPVV + RC+  F  V ++ HLCAGY  GGCDSCQADSGGPLR
Sbjct:    1 MESRRYVEWQRRNFSGEPQYRAEYSRLNGASEGG-----TTVRLRATNIFEGGLFALAVRART-NGTQCFGDIRQQPATK---VVFEAMPEQCPIRAREPNVSG-VPRIVGGSVVN-EGNSRSSFGWMALIWEMQGG---------------EMRPICGGAQFENGYVATAAHCLVQLA--PQNYRVSVGKQHAERQRNGVVRILEAYAHPRYETLASNEAVYDVAVLKLEGGG-SDVVIELNVQSQVPRAGEFVTAAGYGYISEQWTALPVPNRLRRVDVPVVSSVRCERTFEGVSSEIHLCAGYEGGGCDSCQADSGGPLR 294          
BLAST of Ggra1176.t1 vs. uniprot
Match: A0A161PP81 (Trypsin n=2 Tax=Bdellovibrio bacteriovorus TaxID=959 RepID=A0A161PP81_BDEBC)

HSP 1 Score: 130 bits (327), Expect = 4.500e-31
Identity = 91/211 (43.13%), Postives = 119/211 (56.40%), Query Frame = 0
Query:  213 CGGSHFRRGFVATAAHCVAARAHAPQLLRVSIGAVPA-QAQRAQLLRVRAVHTHPQYETLPSNEALFDVAVLELQDDARTNHTIALND---DARAPAAGAFV-TAAGFGYISEQWPALPQPNRLLRVDVPVVPTARCQAAFRAVRADAHLCAGYAAGGCDSCQADSGGPLRHVRARGGEQRLVGVVSFGAGCARARSPGVYTRVSTVAAWM 418
            CGGS  R+ +V TAAHCV        +  V+IG     Q  +A++++ + V  HPQY+    N A FD A++ELQ D+ T   IA+N    +    A G  V T AG+G   E   +LP  +RL +VDVP+VP   C   ++       LCAGYA GG DSCQ DSGGPL       G+  L+GVVS+G GCARA  PGVY +VS    W+
Sbjct:   54 CGGSLIRKNWVLTAAHCV----KGSTVRSVAIGLHDQKQISKAEVIKTKRVIPHPQYD---DNNADFDYALIELQKDS-TYEPIAINTTEIEVPETADGEIVATVAGWGATRENSYSLP--SRLQKVDVPLVPHELCNKNYKNNITSRMLCAGYARGGKDSCQGDSGGPLIARGGMMGQSVLIGVVSWGEGCARANLPGVYAKVSEATTWI 254          
BLAST of Ggra1176.t1 vs. uniprot
Match: A0A853ALV5 (Secreted trypsin-like serine protease n=1 Tax=Saccharopolyspora hordei TaxID=1838 RepID=A0A853ALV5_9PSEU)

HSP 1 Score: 121 bits (304), Expect = 9.420e-28
Identity = 92/258 (35.66%), Postives = 123/258 (47.67%), Query Frame = 0
Query:  157 AAARAPKIVGGSAVGAPPNSLASFGWMALIWEAEAXXXXXXXXXXXXAQTTDARPICGGSHFRRGFVATAAHCVAARAHAPQLLRVSIGAVPAQAQRAQLLRVRAVHTHPQYETLPSNEALFDVAVLEL-QDDARTNHTIALNDDARAPAAGAFVTAAGFGYISEQWPALPQPNRLLRVDVPVVPTARCQAAFRAVRADAHLCAGYAAGGCDSCQADSGGPLRHVRARGGEQRLVGVVSFGAGCARARSPGVYTRVST 413
            AA  AP IVGG      P  +    W+  + +                  T     CGG+  +   V TAAHCV      P+ ++V  G    Q+    +  V  +  HPQY+   +     DVAVL L QD  +    +A  DD     AG   +  G+G  +E   A    + L + DVP+   A CQ A+   +ADA +CAG+A GG DSCQ DSGGPL        E +LVG+VS G GCAR  +PG+YTRV+T
Sbjct:   37 AATAAPPIVGGE-----PAKITDHPWVVFLTD------------------TQGNQFCGGTVAKANKVITAAHCV--DGDEPEGVKVVAGRESKQSTDGTVADVTGIWVHPQYQDANTGS---DVAVLTLGQDLPQQPLAVATKDDTTLYEAGTMASVYGWGNTAEGGQA---SDTLQKADVPLTSDADCQEAYPQYKADAMVCAGFAEGGVDSCQGDSGGPLVV------EDKLVGIVSTGTGCARPNAPGIYTRVAT 257          
BLAST of Ggra1176.t1 vs. uniprot
Match: B4PPJ3 (Peptidase S1 domain-containing protein n=5 Tax=melanogaster subgroup TaxID=32351 RepID=B4PPJ3_DROYA)

HSP 1 Score: 116 bits (291), Expect = 4.390e-26
Identity = 76/214 (35.51%), Postives = 110/214 (51.40%), Query Frame = 0
Query:  213 CGGSHFRRGFVATAAHCVAARAHAPQLLRVSIGAVPAQAQRAQLLRVRAVHTHPQYETLPSNEALFDVAVLELQDDARTNHTI-ALNDDARAPAAGAFVTAAGFGYISEQWPALPQPNRLLRVDVPVVPTARCQAAFRAVRADAHLCAGYAAGGCDSCQADSGGPLRHVRARGGEQRLVGVVSFGAGCARARSPGVYTRVSTVAAWMRAVADGA 425
            CGGS      + TAAHC++   H  +LL+V +G         +L  V  +HTH Q+     +   +D+ ++ L  +   +  + A+  + +  AAG + T AG+G+ S   PA    + L    VP+V  A C+        D  LCAGY  GG DSCQ DSGGPL         ++LVG+VS+G GCA A  PGVYTR+  +  W+  V + A
Sbjct:   55 CGGSIINNHTILTAAHCLSGVPH--RLLKVKVGGTSRYRNDGELFSVADLHTHEQFNAKTMD---YDIGIIRLTKNLTLSRKVKAIPINPKKVAAGTYATIAGWGFKSMNGPA---SDSLRYARVPIVDQAACRNLLGKTVTDRMLCAGYLKGGTDSCQMDSGGPLSVA------EQLVGIVSWGVGCALADKPGVYTRLDALHPWLNKVLNKA 254          
BLAST of Ggra1176.t1 vs. uniprot
Match: A0A0B8WHB0 (Trypsin n=1 Tax=Bdellovibrio sp. ArHS TaxID=1569284 RepID=A0A0B8WHB0_9PROT)

HSP 1 Score: 115 bits (288), Expect = 1.310e-25
Identity = 83/211 (39.34%), Postives = 111/211 (52.61%), Query Frame = 0
Query:  213 CGGSHFRRGFVATAAHCVAARAHAPQLLRVSIGAVPAQ-AQRAQLLRVRAVHTHPQYETLPSNEALFDVAVLELQDDARTNHTIALNDDARAPAAGA----FVTAAGFGYISEQWPALPQPNRLLRVDVPVVPTARCQAAFRAVRADAHLCAGYAAGGCDSCQADSGGPLRHVRARGGEQRLVGVVSFGAGCARARSPGVYTRVSTVAAWM 418
            CGGS  R  +V TAAHCV        +  V IG    +   +A++++ + +  HP Y     N A FD A++ELQ D+ +   IA+N        GA      T AG+G   E   +LP  +RL +VDVP+V    C   ++       LCAGY  GG DSCQ DSGGPL       G+  L+GVVS+G GCARA  PGVY +V+    W+
Sbjct:   55 CGGSLIRSNWVLTAAHCV----KGASVKNVVIGLHDQKNLSKAEVIKPKRIIAHPLYN---DNTADFDFALIELQKDS-SYEPIAINTSEIEIPDGANGQIVATVAGWGATRENSYSLP--SRLQKVDVPLVAHDLCSKNYKNTITSRMLCAGYPRGGKDSCQGDSGGPLVARGGMMGQSVLIGVVSWGEGCARANLPGVYAKVNAETTWI 255          
BLAST of Ggra1176.t1 vs. uniprot
Match: A0A081BZM0 (Peptidase S1 and S6 chymotrypsin/Hap n=1 Tax=Candidatus Vecturithrix granuli TaxID=1499967 RepID=A0A081BZM0_9BACT)

HSP 1 Score: 115 bits (289), Expect = 1.420e-25
Identity = 87/217 (40.09%), Postives = 114/217 (52.53%), Query Frame = 0
Query:  208 DARP---ICGGSHFRRGFVATAAHCVAARAHAPQLLRVSIGAVPAQAQRAQLLRVRAVH--THPQYETLPSNEALFDVAVLEL-QDDARTNHTIALNDDARAPAAGAFVTAAGFGYISEQWPALPQPNRLLRVDVPVVPTARCQAAFRAVRADAHLCAGYAAGGCDSCQADSGGPLRHVRARGGEQRLVGVVSFGAGCARARSPGVYTRVSTVAAWM 418
            D RP    CGG+     +V TAAHC+         + V +G     A  +   R+  +    HP Y +   +    D+A+LEL Q  A+T   IA N  +   AAG   T  G+G  + ++P    P+ L++VDVP+V  A C AA+      +  CAGYAAGG DSC+ DSGGPL  V    G    VGVVS+G GCA A   GVYTRVS  AAW+
Sbjct:   59 DPRPYGQFCGGALIHANWVLTAAHCLGGN------IDVVLGTNDLTASASTYERIAVIQQIAHPSYNSSTIDN---DIALLELAQASAQT--PIAWNTSSAYNAAGTNSTVIGWG--NTEYPGESYPDLLMQVDVPIVSDAACSAAYPGEITSSMFCAGYAAGGKDSCEGDSGGPLM-VSTGSGSYVQVGVVSWGDGCALAGYYGVYTRVSNYAAWI 261          
BLAST of Ggra1176.t1 vs. uniprot
Match: A0A1H2WQE2 (Trypsin n=2 Tax=Saccharopolyspora TaxID=1835 RepID=A0A1H2WQE2_9PSEU)

HSP 1 Score: 114 bits (286), Expect = 2.970e-25
Identity = 86/269 (31.97%), Postives = 124/269 (46.10%), Query Frame = 0
Query:  146 TPCAIRADEPSAAARAPKIVGGSAVGAPPNSLASFGWMALIWEAEAXXXXXXXXXXXXAQTTDARPICGGSHFRRGFVATAAHCVAARAHAPQLLRVSIGAVPAQAQRAQLLRVRAVHTHPQYETLPSNEALFDVAVLELQDDARTNH-TIALNDDARAPAAGAFVTAAGFGYISEQWPALPQPNRLLRVDVPVVPTARCQAAFRAVRADAHLCAGYAAGGCDSCQADSGGPLRHVRARGGEQRLVGVVSFGAGCARARSPGVYTRVST 413
            T  A  +D  +  A+ P IVGG      P  +A   W+  + +                  T     CGG+  +   + TAAHCV+     P+L++V  G    Q    ++ +V  +  HP ++   S     DVAVL L  + +     +A   D      G   T  G+G  +E   A      L + +VP+V    CQ A+   ++DA +CAG   GG DSCQ DSGGPL        E +L+G+VS G GCAR  +PG+YTRV+T
Sbjct:   26 TTAANASDRDALTAKVPPIVGGQ-----PAKIADHPWVVYLTD------------------TQGNQFCGGTLAKANKIVTAAHCVSGEK--PELVQVVAGREDKQTSEGKVAKVTGIWVHPNFQNANSGA---DVAVLTLDQELQQQPLAVAEKGDTSLYETGKTSTVLGWGATAEGGQA---SQTLQKAEVPLVSDQECQKAYPQYKSDAMVCAGLPQGGVDSCQGDSGGPLVV------ENKLIGIVSTGNGCARPNAPGIYTRVAT 257          
BLAST of Ggra1176.t1 vs. uniprot
Match: A0A514X1H5 (Serine protease n=1 Tax=Bdellovibrio sp. NC01 TaxID=2220073 RepID=A0A514X1H5_9PROT)

HSP 1 Score: 114 bits (285), Expect = 3.340e-25
Identity = 87/218 (39.91%), Postives = 119/218 (54.59%), Query Frame = 0
Query:  213 CGGSHFRRGFVATAAHCVAARAHAPQLLRVSIGAVPA-QAQRAQLLRVRAVHTHPQYETLPSNEALFDVAVLELQDDARTNHTIALND------DARAPAAGAFVTAAGFGYISEQWPALPQPNRLLRVDVPVVPTARCQAAFRAVRADAHLCAGYAAGGCDSCQADSGGPLRHVRARGGEQRLVGVVSFGAGCARARSPGVYTRVSTVAAWMRAVAD 423
            CGGS  ++ +V TAAHCV        + +V IG     Q Q A+ +  + +  +PQY +  ++   +D A++EL  D+ +   IALN       D   P      T AG+G  SE   +LP  N L +VDVP+V  A C  ++     D  +CAGY  GG DSCQ DSGGPL   +A  G+  L+GVVS+G GCARA  PGVY++VS    W+ A A 
Sbjct:   56 CGGSLIKKNWVLTAAHCV----KGGSIDKVVIGLHDQKQPQNAEAIAPKRIIANPQYNSSTTD---YDFALIELSKDS-SYAPIALNKTDIVIADDGTPIMS---TVAGWGTTSEGSYSLP--NLLQKVDVPLVSAASCNKSYANKITDRMICAGYTTGGKDSCQGDSGGPLV-AQADDGQTYLIGVVSWGRGCARAGYPGVYSKVSAGYDWIMANAQ 259          
BLAST of Ggra1176.t1 vs. uniprot
Match: serine protease n=2 Tax=Saccharothrix coeruleofusca TaxID=33919 RepID=UPI001AE35165 (serine protease n=2 Tax=Saccharothrix coeruleofusca TaxID=33919 RepID=UPI001AE35165)

HSP 1 Score: 112 bits (281), Expect = 7.710e-25
Identity = 89/214 (41.59%), Postives = 112/214 (52.34%), Query Frame = 0
Query:  205 QTTDARPICGGSHFRRGFVATAAHCVAARA------HAPQLLRVSIGAVPAQAQRAQLLRVRAVHTHPQYETLPSNEALFDVAVLELQDDARTNHTIALNDDARAPAAGAFVTAAGFGYISEQWPALPQPNRLLRVDVPVVPTARCQAAFRAVRADAHLCAGYAAGGCDSCQADSGGPLRHVRARGGEQRLVGVVSFGAGCARARSPGVYTRVS 412
            Q T  R  CGG+      V TAAHCV  R+       AP+ +   +G    + +  + + V  V  HP++  +   +   D+AVL L+      H +A+    RA  AG   T  G+G   E W A P P RL R DVPV   A C AA    RADA LCAG+  GG D+C+ DSGGPL      GG   LVGVVS+G GCAR   PGVYTR+S
Sbjct:   39 QDTGGRLFCGGALVAPDRVVTAAHCVVERSLLGPRDRAPESITAVVGRTDLRGREGEQVGVVGVWRHPEFRDVTGGD---DLAVLTLERGLP--HPVAVG---RA-RAGDVATVLGWGRTGE-W-AAPSP-RLRRADVPVRADAECAAAVPGYRADAMLCAGHPEGGRDACEGDSGGPL----VVGGA--LVGVVSYGFGCARPGQPGVYTRLS 234          
BLAST of Ggra1176.t1 vs. uniprot
Match: A0A1I4SZ17 (Trypsin n=3 Tax=Saccharopolyspora TaxID=1835 RepID=A0A1I4SZ17_9PSEU)

HSP 1 Score: 113 bits (282), Expect = 1.060e-24
Identity = 78/207 (37.68%), Postives = 106/207 (51.21%), Query Frame = 0
Query:  207 TDARPICGGSHFRRGFVATAAHCVAARAHAPQLLRVSIGAVPAQAQRAQLLRVRAVHTHPQYETLPSNEALFDVAVLEL-QDDARTNHTIALNDDARAPAAGAFVTAAGFGYISEQWPALPQPNRLLRVDVPVVPTARCQAAFRAVRADAHLCAGYAAGGCDSCQADSGGPLRHVRARGGEQRLVGVVSFGAGCARARSPGVYTRVS 412
            T     CGG+  +   + TAAHCV      P+ ++V  G    Q     + +V  +  HPQY+   S     DVAVL L QD  +    +A  DD+    AG      G+G  +E   A      L + +VP+   A CQ A+   +A+A +CAG+  GG DSCQ DSGGPL        E +LVG+VS G GCAR  +PG+YTRV+
Sbjct:   64 TQGNQFCGGTVAKANKIITAAHCV--NGDKPEAVQVVAGRESKQNTDGTVAKVTGIWVHPQYQDANSGS---DVAVLTLGQDLPQQPLAVASKDDSALYEAGKTAGVLGWGATAEGGEA---SETLQKAEVPLTSDADCQKAYPQYKAEAMVCAGFPQGGVDSCQGDSGGPLVV------ENKLVGIVSTGNGCARPNAPGIYTRVA 256          
The following BLAST results are available for this feature:
BLAST of Ggra1176.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2462.900e-8951.39Serine protease 56 n=1 Tax=Gracilariopsis chorda T... [more]
A0A161PP814.500e-3143.13Trypsin n=2 Tax=Bdellovibrio bacteriovorus TaxID=9... [more]
A0A853ALV59.420e-2835.66Secreted trypsin-like serine protease n=1 Tax=Sacc... [more]
B4PPJ34.390e-2635.51Peptidase S1 domain-containing protein n=5 Tax=mel... [more]
A0A0B8WHB01.310e-2539.34Trypsin n=1 Tax=Bdellovibrio sp. ArHS TaxID=156928... [more]
A0A081BZM01.420e-2540.09Peptidase S1 and S6 chymotrypsin/Hap n=1 Tax=Candi... [more]
A0A1H2WQE22.970e-2531.97Trypsin n=2 Tax=Saccharopolyspora TaxID=1835 RepID... [more]
A0A514X1H53.340e-2539.91Serine protease n=1 Tax=Bdellovibrio sp. NC01 TaxI... [more]
serine protease n=2 Tax=Saccharothrix coeruleofusca TaxID=33919 RepID=UPI001AE351657.710e-2541.59serine protease n=2 Tax=Saccharothrix coeruleofusc... [more]
A0A1I4SZ171.060e-2437.68Trypsin n=3 Tax=Saccharopolyspora TaxID=1835 RepID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 214..229
score: 48.64
coord: 275..289
score: 24.93
coord: 366..378
score: 60.46
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 163..418
e-value: 4.8E-48
score: 175.6
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 203..418
e-value: 2.8E-37
score: 128.7
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 164..423
score: 26.308786
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 164..417
e-value: 1.84454E-48
score: 164.757
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldGENE3D2.40.10.10coord: 157..421
e-value: 2.8E-46
score: 159.9
NoneNo IPR availablePANTHERPTHR24253TRANSMEMBRANE PROTEASE SERINEcoord: 141..422
NoneNo IPR availablePANTHERPTHR24253:SF48FI06405Pcoord: 141..422
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 438..462
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 463..493
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..437
NoneNo IPR availableTMHMMTMhelixcoord: 442..464
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 179..422

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000237_piloncontigtig00000237_pilon:88539..90020 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1176.t1Ggra1176.t1Gracilaria gracilis GNS1m malemRNAtig00000237_pilon 88539..90020 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1176.t1 ID=Ggra1176.t1|Name=Ggra1176.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=494bp
MCGAAAVSVRATRKLFTQTLCSNASQLPVVRLFSSCPCFLAYEITSSSRA
TWDVLLLNSSSYVQWRRSNFSAAPRYVRQHSTLNGSSGGGGDGDGSAVRL
APTNVFDNGQFALVIRAASARHAQCFGGAQSPALRPAHAVFEPMPTPCAI
RADEPSAAARAPKIVGGSAVGAPPNSLASFGWMALIWEAEADAAAAAAAA
AARAQTTDARPICGGSHFRRGFVATAAHCVAARAHAPQLLRVSIGAVPAQ
AQRAQLLRVRAVHTHPQYETLPSNEALFDVAVLELQDDARTNHTIALNDD
ARAPAAGAFVTAAGFGYISEQWPALPQPNRLLRVDVPVVPTARCQAAFRA
VRADAHLCAGYAAGGCDSCQADSGGPLRHVRARGGEQRLVGVVSFGAGCA
RARSPGVYTRVSTVAAWMRAVADGALRERAERQRRRSVALAAGGAVFAAV
VLAVAAVALGAWGWRRRRRRLRAARTSAALARSDAPSETGVSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR043504Peptidase_S1_PA_chymotrypsin
IPR009003Peptidase_S1_PA