Ggra1175.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1175.t1
Unique NameGgra1175.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length272
Homology
BLAST of Ggra1175.t1 vs. uniprot
Match: A0A2V3J264 (Clotting factor B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J264_9FLOR)

HSP 1 Score: 219 bits (557), Expect = 1.220e-66
Identity = 112/244 (45.90%), Postives = 146/244 (59.84%), Query Frame = 0
Query:   28 SPRIVGGQRELEPSVFMWQAAFEHAGSVICGGTLLTHNKVLTAAHCRIRTSPPAARSVVRVGAPDLSRAARAFAVVATYRHPAFARGARGQPLHDLMVVQFHNGDQSLGRWAPRLNAN---------------------------------------------------------------ACNGDSGGPLWSRAAHNRSELLLLGVVSFGYGCANAHAPGVYTRVSEYVPWITRVAAAPDAPF 208
            +PRIVGG+REL PSVFMWQA F H+GS+ICGGTL++HNK+LTAAHC IR +  +A+SVVR+G  +L    +++ +VAT+RH  F+RGAR +P++DLMVV+FHN D++L RWAPRLN +                                                               +C GDSGGPLW+RA  N S+++L GVVSFGYGCA    PGVYTRVS YV WI ++ +  D+PF
Sbjct:   32 APRIVGGKRELHPSVFMWQAVFLHSGSIICGGTLISHNKLLTAAHCNIRNTTASAKSVVRIGGANLHDG-KSYPIVATFRHNNFSRGARNEPVNDLMVVEFHNTDRTLARWAPRLNRDPSLPAPNQTITASGYGRLGETAQLPGHLRSVHVPLVPPDQCIRSYGTAVNPASHICAGSDMFDSCKGDSGGPLWTRAPSNESDVMLFGVVSFGYGCATKGTPGVYTRVSAYVAWIDKLVSRADSPF 274          
BLAST of Ggra1175.t1 vs. uniprot
Match: C3Y021 (Peptidase S1 domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Y021_BRAFL)

HSP 1 Score: 84.3 bits (207), Expect = 5.880e-16
Identity = 66/197 (33.50%), Postives = 95/197 (48.22%), Query Frame = 0
Query:   30 RIVGGQRELEPSVFMWQAAFEHAGSVICGGTLLTHNKVLTAAHC-----RIRTSPP-----AARSVVRVGAPDLSR----AARAFAVVATYRH---PAFARGARGQPLHD---LMVVQFHNGDQSLGRWAPRLNA---NACNGDSGGPLWSRAAHNRSELLLLGVVSFGYGCANAHAPGVYTRVSEYVPWITRVAAA 203
            RI+GG   ++ S + WQ + +  G  +CGGTLL  + V+TAAHC     R     P       +++V  G    S     A    +  ATY +   PA      G P+ +       ++ NG  S        +    +AC GDSGGPL     +   +  L G+VS+GYGCA A+ PG+YTRV+++V WI    AA
Sbjct:   23 RIMGGVEAVQGS-WPWQVSLKLYGGHVCGGTLLARDWVVTAAHCVADHHRTEKDSPQQDIGVTKAIVHEGYDATSSNNDIALLRLSSSATYTNYVSPACLPARNGFPIMNRDKCNTRKYMNGQVSPNMLCAGYDEGGRDACQGDSGGPL---VCNYSGKWTLDGIVSWGYGCAQAYKPGIYTRVTQFVSWINNKMAA 215          
BLAST of Ggra1175.t1 vs. uniprot
Match: serine protease 33 n=1 Tax=Ailuropoda melanoleuca TaxID=9646 RepID=UPI00059ACBF2 (serine protease 33 n=1 Tax=Ailuropoda melanoleuca TaxID=9646 RepID=UPI00059ACBF2)

HSP 1 Score: 82.0 bits (201), Expect = 3.000e-15
Identity = 67/182 (36.81%), Postives = 88/182 (48.35%), Query Frame = 0
Query:   27 VSPRIVGGQRELEPSVFMWQAAFEHAGSVICGGTLLTHNKVLTAAHC--RIRTSP-------PAARSV--VRVGAPDLSRAARAFAVVATYRHPAFARGARGQPLHDLMVVQFHNGDQSLGRWAPRLNANACNGDSGGPLWSRAAHNRSELLLLGVVSFGYGCANAHAPGVYTRVSEYVPWI 197
            VS RIVGG R+     + WQA+ +H G+ +CGG+L+    VLTAAHC    + +P       PA R +  VRV   D     R + V                P  + +V+    G    G    R +A  C GDSGGPL           +L+GVVS+G GCA  + PGVYT V+ Y PWI
Sbjct:   33 VSSRIVGG-RDARDGQWPWQASIQHRGAHVCGGSLIAPQWVLTAAHCFPSSQKAPFLPPVPLPAWRPLQGVRVPLLDARTCDRLYHV------------GTDVPRTEPIVLP---GSLCAGYVQGRKDA--CQGDSGGPL---TCVRSGRWVLVGVVSWGKGCALPNRPGVYTNVATYSPWI 193          
BLAST of Ggra1175.t1 vs. uniprot
Match: serine protease 33 n=1 Tax=Echinops telfairi TaxID=9371 RepID=UPI00064E6EE8 (serine protease 33 n=1 Tax=Echinops telfairi TaxID=9371 RepID=UPI00064E6EE8)

HSP 1 Score: 81.3 bits (199), Expect = 4.130e-15
Identity = 65/176 (36.93%), Postives = 87/176 (49.43%), Query Frame = 0
Query:   27 VSPRIVGGQRELEPSVFMWQAAFEHAGSVICGGTLLTHNKVLTAAHC----RIRTSPPAARSVVRVGAPDL-SRAARAFAVVATYRHPAFARGARGQPLHDLMVVQFHNGDQSLGRWAPRLNANACNGDSGGPLWSRAAHNRSELLLLGVVSFGYGCANAHAPGVYTRVSEYVPWI 197
            V+ RIVGG R+     + WQA+ +H G+ +CGG+L+    VLTAAHC     +    P  R +  V  P L SRA      V +             P  + +V+    G+   G    R +A  C GDSGGPL           +L+GVVS+G GCA  + PGVYT V+ Y PWI
Sbjct:   22 VASRIVGG-RDARDGEWPWQASVQHRGAHVCGGSLVAPQWVLTAAHCFPSLPLSVPLPEWRPLQGVRVPLLDSRACDRLYHVGS-----------DVPRGERIVLP---GNVCAGYVEGRRDA--CQGDSGGPL---TCLQSGRWVLVGVVSWGKGCALPNRPGVYTNVATYSPWI 177          
BLAST of Ggra1175.t1 vs. uniprot
Match: trypsin-1 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0008706BC7 (trypsin-1 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0008706BC7)

HSP 1 Score: 83.2 bits (204), Expect = 8.270e-15
Identity = 71/245 (28.98%), Postives = 97/245 (39.59%), Query Frame = 0
Query:   28 SPRIVGGQRELEPSVFMWQAAFEHAGSVICGGTLLTHNKVLTAAHCRIRTSPPAARSVVRVGAPDLSR--AARAFAVVATYRHPAFA--------------------------------------------------RGARGQPLHDLMVVQFHNGDQSLGRWAPRLN-------------ANACNGDSGGPLWSRAAHNRSELLLLGVVSFGYGCANAHAPGVYTRVSEYVPWITRVAAAPDAP 207
            S +IVGG++  E   F WQ      G+ ICGG++L+ N  +TAAHC ++ +P    S+  VG   L +   A A  V + + HP +                                                    G R  P    +VV      Q   R+ P  N              ++C GDSGGP      ++     L GVVS+G GCA   APGVYTRV+E+ PW+  V A   AP
Sbjct:   28 SGKIVGGEKAREGD-FPWQVQLRRHGTQICGGSILSENFAVTAAHC-VQNNP----SIYSVGYGSLRKYEKAEAVPVKSIHIHPGWKPNQGLSNDIAILKFGEPITLDNRKAAPICLPPKAYSPSGNLKVSGWGRTREGGRTSPELRYVVVPIIEDSQCSTRYGPVFNNASMFCAMYPAGGRDSCQGDSGGPA---VVNHDGVHYLSGVVSWGEGCARYGAPGVYTRVNEFTPWVEEVVAENGAP 263          
BLAST of Ggra1175.t1 vs. uniprot
Match: A0A3Q7R2A4 (serine protease 33 n=1 Tax=Vulpes vulpes TaxID=9627 RepID=A0A3Q7R2A4_VULVU)

HSP 1 Score: 82.0 bits (201), Expect = 2.500e-14
Identity = 61/176 (34.66%), Postives = 85/176 (48.30%), Query Frame = 0
Query:   27 VSPRIVGGQRELEPSVFMWQAAFEHAGSVICGGTLLTHNKVLTAAHCRIRTSPPAARSVVRVGAPDLSRAARAFAVVATYRHPAFARGARGQPLHDLMVVQFHNGDQ-----SLGRWAPRLNANACNGDSGGPLWSRAAHNRSELLLLGVVSFGYGCANAHAPGVYTRVSEYVPWI 197
            VS RIVGG R+     + WQA+ +H G+ +CGG+L+    VLTAAHC + +  P       +  PD       +  +   R P        +  H  M      G+      S+     + + +AC GDSGGPL           +L+GVVS+G GCA  + PGVYT V+ Y PWI
Sbjct:  182 VSSRIVGG-RDARDGQWPWQASIQHRGAHVCGGSLIAPQWVLTAAHCFLSSQKPPFLPPEPL--PD-------WRPLQGVRVPLLDSRTCDRLYH--MGTNLPRGEHIVLPGSVCAGYVQGHRDACQGDSGGPL---TCVKSGRWVLVGVVSWGKGCALPNRPGVYTNVATYSPWI 342          
BLAST of Ggra1175.t1 vs. uniprot
Match: A0A6P4ERY8 (trypsin alpha-like n=1 Tax=Drosophila rhopaloa TaxID=1041015 RepID=A0A6P4ERY8_DRORH)

HSP 1 Score: 78.6 bits (192), Expect = 2.780e-14
Identity = 60/172 (34.88%), Postives = 82/172 (47.67%), Query Frame = 0
Query:   30 RIVGGQRELEPSVFMWQAAFEHAGSVICGGTLLTHNKVLTAAHCRIRTSPPAARSVVRVGAPDLSRAARAFAVVATYRHPAFARGARGQPLHDLMVVQFHNGDQSLGRWAPRLNANACNGDSGGPLWSRAAHNRSELLLLGVVSFGYGCANAHAPGVYTRVSEYVPWITRVA 201
            RIVGG      S F WQ + + +GS  CGG++ + N ++TAAHC    S   A S V V     S  + +     TY +        G  + + M+    +G              AC GDSGGPL S         LL+GVVS+GYGCA A+ PGVY+ V++   W+   A
Sbjct:   30 RIVGGTATTITS-FPWQISLQRSGSHSCGGSIYSANIIVTAAHCLQSVS---ASSYVNVNIVSQSVCSSS-----TYGY--------GSEIRNTMICAASSGKD------------ACQGDSGGPLVSGG-------LLVGVVSWGYGCAYANYPGVYSSVADLRSWVVNNA 165          
BLAST of Ggra1175.t1 vs. uniprot
Match: putative serine protease 29 n=1 Tax=Colobus angolensis palliatus TaxID=336983 RepID=UPI0005F49CDC (putative serine protease 29 n=1 Tax=Colobus angolensis palliatus TaxID=336983 RepID=UPI0005F49CDC)

HSP 1 Score: 79.0 bits (193), Expect = 3.810e-14
Identity = 57/149 (38.26%), Postives = 71/149 (47.65%), Query Frame = 0
Query:   56 ICGGTLLTHNKVLTAAHCRIRT-----SPPAARSVVRVGAPDLSRAARAFAVVATYRHPAFARGARGQPLHDLMVVQFHNGDQSLGRWAPRLNANACNGDSGGPLWSRAAHNRSELLLLGVVSFGYGCANAHAPGVYTRVSEYVPWITR 199
            ICGG+L+    VLTAAHC  R+     S P    + +V   +L  A         YR+ +   G R   L D++       D             +C GDSGGPL  R    R    L+GVVS+GYGCA    PGVYTRV  Y+PWI R
Sbjct:   61 ICGGSLIHPQWVLTAAHCIFRSPLPLESLPPPYRLQQVSVQELENAI----CERRYRNASRHTGDRQLILDDMLCAGSEGHD-------------SCYGDSGGPLVCRV---RRSWCLVGVVSWGYGCALRDFPGVYTRVQTYMPWILR 189          
BLAST of Ggra1175.t1 vs. uniprot
Match: D2HV83 (Peptidase S1 domain-containing protein n=1 Tax=Ailuropoda melanoleuca TaxID=9646 RepID=D2HV83_AILME)

HSP 1 Score: 82.0 bits (201), Expect = 4.540e-14
Identity = 67/182 (36.81%), Postives = 88/182 (48.35%), Query Frame = 0
Query:   27 VSPRIVGGQRELEPSVFMWQAAFEHAGSVICGGTLLTHNKVLTAAHC--RIRTSP-------PAARSV--VRVGAPDLSRAARAFAVVATYRHPAFARGARGQPLHDLMVVQFHNGDQSLGRWAPRLNANACNGDSGGPLWSRAAHNRSELLLLGVVSFGYGCANAHAPGVYTRVSEYVPWI 197
            VS RIVGG R+     + WQA+ +H G+ +CGG+L+    VLTAAHC    + +P       PA R +  VRV   D     R + V                P  + +V+    G    G    R +A  C GDSGGPL           +L+GVVS+G GCA  + PGVYT V+ Y PWI
Sbjct:  302 VSSRIVGG-RDARDGQWPWQASIQHRGAHVCGGSLIAPQWVLTAAHCFPSSQKAPFLPPVPLPAWRPLQGVRVPLLDARTCDRLYHV------------GTDVPRTEPIVLP---GSLCAGYVQGRKDA--CQGDSGGPL---TCVRSGRWVLVGVVSWGKGCALPNRPGVYTNVATYSPWI 462          
BLAST of Ggra1175.t1 vs. uniprot
Match: A0A833RQP2 (Peptidase S1 domain-containing protein n=1 Tax=Frieseomelitta varia TaxID=561572 RepID=A0A833RQP2_9HYME)

HSP 1 Score: 80.5 bits (197), Expect = 1.660e-13
Identity = 61/185 (32.97%), Postives = 87/185 (47.03%), Query Frame = 0
Query:   30 RIVGGQRELEPSVFMWQAAFEHAGSVICGGTLLTHNKVLTAAHCRIRTSPPAARSVVRVGAPDLSR--AARAFAVVATYRHPAFARGARGQP--LHDLMVVQFHNGD--QSLGRWAP-----------RLNANACNGDSGGPLWSRAAHNRSELLLLGVVSFGYGCANAHAPGVYTRVSEYVPWI 197
            RIVGGQ  +    + W AA  + G   CGG+L+    +LTAAHC      P  + +  +  P  S+  A R   V+         R +  QP  L  + +  ++N +  Q  G  AP           R   ++C+GDSGGPL      N      +G+VS+G GC     PGVYTRV+ ++PWI
Sbjct:  329 RIVGGQNAILGE-WPWIAALFNGGRQFCGGSLIDDKHILTAAHCVANEPVPFTQQIRPICLPSGSQLYAGRTGTVIGW----GSLRESGPQPAVLQKVSIPIWYNSECRQKYGAAAPGGIVDSFLCAGRAAKDSCSGDSGGPLMV----NDGRWTQVGIVSWGIGCGKGQYPGVYTRVTHFLPWI 504          
The following BLAST results are available for this feature:
BLAST of Ggra1175.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2641.220e-6645.90Clotting factor B n=1 Tax=Gracilariopsis chorda Ta... [more]
C3Y0215.880e-1633.50Peptidase S1 domain-containing protein n=1 Tax=Bra... [more]
serine protease 33 n=1 Tax=Ailuropoda melanoleuca TaxID=9646 RepID=UPI00059ACBF23.000e-1536.81serine protease 33 n=1 Tax=Ailuropoda melanoleuca ... [more]
serine protease 33 n=1 Tax=Echinops telfairi TaxID=9371 RepID=UPI00064E6EE84.130e-1536.93serine protease 33 n=1 Tax=Echinops telfairi TaxID... [more]
trypsin-1 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0008706BC78.270e-1528.98trypsin-1 n=1 Tax=Galendromus occidentalis TaxID=3... [more]
A0A3Q7R2A42.500e-1434.66serine protease 33 n=1 Tax=Vulpes vulpes TaxID=962... [more]
A0A6P4ERY82.780e-1434.88trypsin alpha-like n=1 Tax=Drosophila rhopaloa Tax... [more]
putative serine protease 29 n=1 Tax=Colobus angolensis palliatus TaxID=336983 RepID=UPI0005F49CDC3.810e-1438.26putative serine protease 29 n=1 Tax=Colobus angole... [more]
D2HV834.540e-1436.81Peptidase S1 domain-containing protein n=1 Tax=Ail... [more]
A0A833RQP21.660e-1332.97Peptidase S1 domain-containing protein n=1 Tax=Fri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 30..197
e-value: 7.0E-15
score: 65.4
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 144..197
e-value: 5.3E-14
score: 52.6
coord: 32..128
e-value: 1.3E-9
score: 38.3
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 31..202
score: 16.148277
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldGENE3D2.40.10.10coord: 14..128
e-value: 1.3E-14
score: 55.7
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldGENE3D2.40.10.10coord: 129..203
e-value: 3.4E-18
score: 67.9
NoneNo IPR availablePANTHERPTHR24276POLYSERASE-RELATEDcoord: 144..207
NoneNo IPR availablePANTHERPTHR24276POLYSERASE-RELATEDcoord: 7..129
NoneNo IPR availablePANTHERPTHR24276:SF91FI18310P1coord: 7..129
NoneNo IPR availablePANTHERPTHR24276:SF91FI18310P1coord: 144..207
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..225
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 251..271
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 226..250
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availableTMHMMTMhelixcoord: 166..188
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 228..250
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 68..73
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 7..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000237_piloncontigtig00000237_pilon:87207..88309 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1175.t1Ggra1175.t1Gracilaria gracilis GNS1m malemRNAtig00000237_pilon 87207..88309 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1175.t1 ID=Ggra1175.t1|Name=Ggra1175.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=272bp
MPVCAFTFPLLLAAAAAAAAAAAAAAVSPRIVGGQRELEPSVFMWQAAFE
HAGSVICGGTLLTHNKVLTAAHCRIRTSPPAARSVVRVGAPDLSRAARAF
AVVATYRHPAFARGARGQPLHDLMVVQFHNGDQSLGRWAPRLNANACNGD
SGGPLWSRAAHNRSELLLLGVVSFGYGCANAHAPGVYTRVSEYVPWITRV
AAAPDAPFGAAAAAAAAAEPPQRLNWTVVAAAATASVALVAVLLVLFVYV
RCLRADEHGDDDDDDEALPRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001254Trypsin_dom
IPR043504Peptidase_S1_PA_chymotrypsin
IPR018114TRYPSIN_HIS
IPR009003Peptidase_S1_PA