Ggra1174.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1174.t1
Unique NameGgra1174.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length182
Homology
BLAST of Ggra1174.t1 vs. uniprot
Match: A0A4W4FTD0 (Uncharacterized protein n=2 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4FTD0_ELEEL)

HSP 1 Score: 79.0 bits (193), Expect = 4.250e-14
Identity = 34/85 (40.00%), Postives = 48/85 (56.47%), Query Frame = 0
Query:   84 REVYACPFDNCARTSTEHSNLKAHMRMHTGERPYSCSAPGCKKNFRWKSSLTYHEKAIHTSVKPYKCAPCRKHFVEKRKYKLHLQ 168
            R ++ C F  C +  T+ S+LKAH+R HTGE+PY C+  GC   F     LT H +  HT  KP++CA C + F       LH++
Sbjct:  265 RRIHHCDFPGCKKVYTKSSHLKAHLRTHTGEKPYRCTWEGCDWRFARSDELTRHFRKKHTGAKPFQCAVCSRSFSRSDHLALHMK 349          
BLAST of Ggra1174.t1 vs. uniprot
Match: A0A7S0BQ76 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQ76_9RHOD)

HSP 1 Score: 75.9 bits (185), Expect = 7.400e-13
Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = 0
Query:   81 QGVREVYACPFDNCARTSTEHSNLKAHMRMHTGERPYSCSAPGCKKNFRWKSSLTYHEKAIH---TSVKPY 148
            +G  +++ C F  C R+  + +N K HMR HTGE PY+CSAPGC+K F WKSS+T+HE   H   TS  P+
Sbjct:   31 EGDVQLFRCTF--CDRSFNKKANCKIHMRKHTGELPYTCSAPGCEKRFMWKSSITFHELNAHPNGTSDSPF 99          
BLAST of Ggra1174.t1 vs. uniprot
Match: A0A7S3A854 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A854_9RHOD)

HSP 1 Score: 75.5 bits (184), Expect = 1.000e-12
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0
Query:   81 QGVREVYACPFDNCARTSTEHSNLKAHMRMHTGERPYSCSAPGCKKNFRWKSSLTYHEKAIH 142
            +G  +++ C F  C R+  + +N K HMR HTGE PY+CSAPGC+K F WKSS+T+HE   H
Sbjct:   29 EGDVQLFRCTF--CDRSFNKKANCKIHMRKHTGELPYTCSAPGCEKRFMWKSSITFHELNAH 88          
BLAST of Ggra1174.t1 vs. uniprot
Match: A0A1X6NUK8 (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NUK8_PORUM)

HSP 1 Score: 68.2 bits (165), Expect = 2.650e-11
Identity = 31/61 (50.82%), Postives = 41/61 (67.21%), Query Frame = 0
Query:   79 TTQGVRE-VYACPFDNCARTSTEHSNLKAHMRMHTGERPYSCSAPGCKKNFRWKSSLTYHE 138
            TT G  E VY+CPFD C +  ++  NLKAH+R HTG++P+ C    C + F WKSSL+ HE
Sbjct:   15 TTDGSGEPVYSCPFDGCGKLFSKRFNLKAHLRKHTGDKPFVCRH--CARRFMWKSSLSSHE 73          
BLAST of Ggra1174.t1 vs. uniprot
Match: A0A1X6NY10 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NY10_PORUM)

HSP 1 Score: 69.7 bits (169), Expect = 1.060e-10
Identity = 28/53 (52.83%), Postives = 35/53 (66.04%), Query Frame = 0
Query:   85 EVYACPFDNCARTSTEHSNLKAHMRMHTGERPYSCSAPGCKKNFRWKSSLTYH 137
            E Y CP   C+R  +   NLKAH R+H+G+RP+ C  P C K FRW+SSLT H
Sbjct:   67 ERYCCPHPGCSRAFSRSYNLKAHRRIHSGDRPFVCVVPACGKTFRWRSSLTSH 119          
BLAST of Ggra1174.t1 vs. uniprot
Match: oocyte zinc finger protein XlCOF7.1-like n=1 Tax=Boleophthalmus pectinirostris TaxID=150288 RepID=UPI000A1C37D5 (oocyte zinc finger protein XlCOF7.1-like n=1 Tax=Boleophthalmus pectinirostris TaxID=150288 RepID=UPI000A1C37D5)

HSP 1 Score: 68.9 bits (167), Expect = 1.450e-10
Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 0
Query:   94 CARTSTEHSNLKAHMRMHTGERPYSCSAPGCKKNFRWKSSLTYHEKAIHTSVKPYKCAPCRKHFVEKRKYKLH 166
            C +T  +  NLK+HMR+HTGERPY C    C  +F+++ +   H+  +H   KP++C  C+K FV+K +   H
Sbjct:  228 CKKTFPQKRNLKSHMRVHTGERPYHCIP--CGLSFKFQQNFNQHDLTVHRKDKPFRCRVCKKDFVDKSEMIAH 298          
BLAST of Ggra1174.t1 vs. uniprot
Match: A0A368H5G9 (Zinc finger, C2H2 type n=1 Tax=Ancylostoma caninum TaxID=29170 RepID=A0A368H5G9_ANCCA)

HSP 1 Score: 65.5 bits (158), Expect = 2.350e-10
Identity = 33/103 (32.04%), Postives = 51/103 (49.51%), Query Frame = 0
Query:   86 VYACPFDNCARTSTEHSNLKAHMRMHTGERPYSCSAPGCKKNFRWKSSLTYH--------------------EKAIHTSVKPYKCAPCRKHFVEKRKYKLHLQ 168
            V+ACP+  C +T ++ S+LKAH+R H+GE+PY CS  GC+  F     LT +                     K  HT  +P++C+ C + F       LH++
Sbjct:   35 VHACPYAGCMKTYSKSSHLKAHVRTHSGEKPYCCSWEGCEWKFARSDELTRYIYNYLKSSHGKFPRQLWIQRHKRKHTGDRPFQCSLCDRAFSRSDHLSLHMK 137          
BLAST of Ggra1174.t1 vs. uniprot
Match: zinc finger protein 883-like n=1 Tax=Contarinia nasturtii TaxID=265458 RepID=UPI0012D49AC7 (zinc finger protein 883-like n=1 Tax=Contarinia nasturtii TaxID=265458 RepID=UPI0012D49AC7)

HSP 1 Score: 68.6 bits (166), Expect = 2.950e-10
Identity = 28/75 (37.33%), Postives = 41/75 (54.67%), Query Frame = 0
Query:   94 CARTSTEHSNLKAHMRMHTGERPYSCSAPGCKKNFRWKSSLTYHEKAIHTSVKPYKCAPCRKHFVEKRKYKLHLQ 168
            C +      NL+ HM +HTGERP++C  P C + F     L  H+K +H+  K ++CA C K F     YK H++
Sbjct:  298 CCKVFHHSGNLRKHMTLHTGERPFTCDEPNCGRTFVLAQHLKSHQKLVHSDEKSFQCAQCGKLFNHSGNYKKHMR 372          
BLAST of Ggra1174.t1 vs. uniprot
Match: A0A7S0XIR8 (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XIR8_9RHOD)

HSP 1 Score: 66.2 bits (160), Expect = 1.220e-9
Identity = 28/52 (53.85%), Postives = 38/52 (73.08%), Query Frame = 0
Query:   87 YACPFDNCARTSTEHSNLKAHMRMHTGERPYSCSAPGCKKNFRWKSSLTYHE 138
            Y CP  +C +   +  NLKAH+R+H+GERP+SCSA  CKK++ W+SSL  HE
Sbjct:   35 YVCPLPSCDKRFGKRYNLKAHLRIHSGERPFSCSA--CKKSYLWQSSLVAHE 84          
BLAST of Ggra1174.t1 vs. uniprot
Match: gastrula zinc finger protein XlCGF17.1-like n=1 Tax=Aedes albopictus TaxID=7160 RepID=UPI00115630D5 (gastrula zinc finger protein XlCGF17.1-like n=1 Tax=Aedes albopictus TaxID=7160 RepID=UPI00115630D5)

HSP 1 Score: 65.5 bits (158), Expect = 2.640e-9
Identity = 28/75 (37.33%), Postives = 45/75 (60.00%), Query Frame = 0
Query:   94 CARTSTEHSNLKAHMRMHTGERPYSCSAPGCKKNFRWKSSLTYHEKAIHTSVKPYKCAPCRKHFVEKRKYKLHLQ 168
            C +       +  H R+HTGE+P+ C   GC + F   +    HE+++HTS KP+KCA C++ +V +R+  +HLQ
Sbjct:  280 CPKRLRTKEAMDIHERVHTGEKPFPCRE-GCDRRFAHATDRVRHERSMHTSEKPHKCAHCKEAYVRRRELVIHLQ 353          
The following BLAST results are available for this feature:
BLAST of Ggra1174.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4W4FTD04.250e-1440.00Uncharacterized protein n=2 Tax=Electrophorus elec... [more]
A0A7S0BQ767.400e-1349.30Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S3A8541.000e-1251.61Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1X6NUK82.650e-1150.82Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A1X6NY101.060e-1052.83Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
oocyte zinc finger protein XlCOF7.1-like n=1 Tax=Boleophthalmus pectinirostris TaxID=150288 RepID=UPI000A1C37D51.450e-1039.73oocyte zinc finger protein XlCOF7.1-like n=1 Tax=B... [more]
A0A368H5G92.350e-1032.04Zinc finger, C2H2 type n=1 Tax=Ancylostoma caninum... [more]
zinc finger protein 883-like n=1 Tax=Contarinia nasturtii TaxID=265458 RepID=UPI0012D49AC72.950e-1037.33zinc finger protein 883-like n=1 Tax=Contarinia na... [more]
A0A7S0XIR81.220e-953.85Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
gastrula zinc finger protein XlCGF17.1-like n=1 Tax=Aedes albopictus TaxID=7160 RepID=UPI00115630D52.640e-937.33gastrula zinc finger protein XlCGF17.1-like n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 117..142
e-value: 0.01
score: 25.0
coord: 87..111
e-value: 0.0063
score: 25.7
coord: 148..168
e-value: 190.0
score: 2.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 119..142
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 87..116
score: 14.648245
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 117..147
score: 13.505175
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 110..178
e-value: 5.5E-16
score: 60.5
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 87..109
e-value: 3.2E-8
score: 35.6
NoneNo IPR availablePANTHERPTHR24390:SF161KRUEPPEL HOMOLOG 1coord: 87..169
NoneNo IPR availablePANTHERPTHR24390ZINC FINGER PROTEINcoord: 87..169
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 101..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000237_piloncontigtig00000237_pilon:86057..86981 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1174.t1Ggra1174.t1Gracilaria gracilis GNS1m malemRNAtig00000237_pilon 86057..86981 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1174.t1 ID=Ggra1174.t1|Name=Ggra1174.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=182bp
MSNRESLRLPPLHYSRQTSSFNVLLPPLSSSRTAGARLPPIAHAASRVAP
LHARQLPAAPPALPAAPRRPQPIKKTVCTTQGVREVYACPFDNCARTSTE
HSNLKAHMRMHTGERPYSCSAPGCKKNFRWKSSLTYHEKAIHTSVKPYKC
APCRKHFVEKRKYKLHLQLCPSPVAPRLRHE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf