Ggra1173.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra1173.t1
Unique Name	Ggra1173.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	329

Homology

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BLAST of Ggra1173.t1 vs. uniprot
Match: A0A2V3J396 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J396_9FLOR)

HSP 1 Score: 246 bits (628), Expect = 9.120e-77
Identity = 165/312 (52.88%), Postives = 202/312 (64.74%), Query Frame = 0

Query:   19 LASDDPIDFVVSYCKRRKIAYQIGASPVEKQCLAAADAAREQYKHMRNALHAASADAAAADRRGLSPAQKYTIRLHNNRKSANASKVYAEVLKREQAARLASIDSRARQLAHSRLVQTLNNRVS--QLQQALADEKRRVAALQKDNQQLLARL-EAHVCESRVQHSSTAAAVAVTGAHVATPPPSSMPEPLCMSTSTPLHQRIVNSRTGNVVPSWQHMSP--LPLPDSDGKEFHTGLTCSQSQDVDDKSSLPRASVCMPTSSLPMSSAVQIGVLNSQ-TSQDIPPFKGLNSDDLVAPCPGSDFFSTSQPNSK 324
            L SDDP++FV  YCKRR IA++IG+SPVEK C  AA +ARE+YK  RNALH       A DRR LSPAQKYTIRLHNNRKSA+ASKV++EVLKRE AA LASI         SR  +T N R +  QL+ AL  EKRRV  LQK N  LL +L  A+   + VQ              V  PP ++  E +  ST+  LHQR VNSR    + SW  +SP  + LPDSD K+FHTGLTC+QSQD D+K+  P+       SSLPMSS++ + +LNSQ  SQ+  PFK LN+D+L  P PGSDFF+ SQ +SK
Sbjct:   12 LESDDPLEFVALYCKRRNIAFEIGSSPVEKLCAKAAASAREEYKTFRNALHTRED---APDRRALSPAQKYTIRLHNNRKSASASKVFSEVLKREHAAHLASITPSQAATLQSRDRETSNLRTTIYQLEGALKAEKRRVHTLQKHNDHLLTKLAHANFTHAPVQE-------------VVQPPTTTSLEHVPASTA--LHQRYVNSRASPPIASWP-LSPVNIALPDSDVKDFHTGLTCTQSQDADEKAHAPK-------SSLPMSSSLPLALLNSQPASQNDIPFKSLNTDELGGPLPGSDFFNGSQNSSK 297

The following BLAST results are available for this feature:

BLAST of Ggra1173.t1 vs. uniprot

BLAST of Ggra1173.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J396	9.120e-77	52.88	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 54..74
None	No IPR available	COILS	Coil	Coil	coord: 134..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000237_pilon	contig	tig00000237_pilon:83945..84931 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra1173.t1	Ggra1173.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000237_pilon 83945..84931 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra1173.t1 ID=Ggra1173.t1|Name=Ggra1173.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=329bp
MTRATKRPSPSPPSTPPPLASDDPIDFVVSYCKRRKIAYQIGASPVEKQC
LAAADAAREQYKHMRNALHAASADAAAADRRGLSPAQKYTIRLHNNRKSA
NASKVYAEVLKREQAARLASIDSRARQLAHSRLVQTLNNRVSQLQQALAD
EKRRVAALQKDNQQLLARLEAHVCESRVQHSSTAAAVAVTGAHVATPPPS
SMPEPLCMSTSTPLHQRIVNSRTGNVVPSWQHMSPLPLPDSDGKEFHTGL
TCSQSQDVDDKSSLPRASVCMPTSSLPMSSAVQIGVLNSQTSQDIPPFKG
LNSDDLVAPCPGSDFFSTSQPNSKLLCP*