Ggra1166.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1166.t1
Unique NameGgra1166.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length215
Homology
BLAST of Ggra1166.t1 vs. uniprot
Match: A0A2V3J275 (HAD_SAK_1 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J275_9FLOR)

HSP 1 Score: 393 bits (1009), Expect = 9.590e-138
Identity = 190/214 (88.79%), Postives = 200/214 (93.46%), Query Frame = 0
Query:    1 MDLPPRLARALKLHKKVGPIHSLHVFDFDGTLVRTPGPQEGKRRYILETGKAWTGGWWGRPGSLLPPVVESPFPASRVVRTVFEQMEEVMTRSETAVGVVVTGRIQPVREPVLRILDEICIAAKNDTVAPGESFLDHQAVITHPGGRRTTLQFKEDLFRQLVTEEPLGLCPLKELHIWEDRQAHAEAFATDLNDELMKLKAIKTTVHLVTPETP 214
            MDLP RL RALKLHKK+GPI SLHVFDFDGTLVRTPGP+EGKRRY+LETG+AWTGGWWGRPGSL PPVVESPFP+SRVVRTVFEQMEEVMTRS+TAVGVVVTGRIQPVREPVLRILDEICIAAKNDTV  GESFLDH AVITHPGGRRTTLQFKEDLFRQLVTE PL  CPLKELHIWEDR+ HAEAFATDLNDEL  LK+I+TTVH VTP+TP
Sbjct:    1 MDLPQRLGRALKLHKKMGPIQSLHVFDFDGTLVRTPGPEEGKRRYLLETGRAWTGGWWGRPGSLRPPVVESPFPSSRVVRTVFEQMEEVMTRSQTAVGVVVTGRIQPVREPVLRILDEICIAAKNDTVPAGESFLDHNAVITHPGGRRTTLQFKEDLFRQLVTEGPLASCPLKELHIWEDRKEHAEAFATDLNDELFDLKSIRTTVHFVTPDTP 214          
BLAST of Ggra1166.t1 vs. uniprot
Match: R7Q5J8 (HAD_SAK_1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5J8_CHOCR)

HSP 1 Score: 295 bits (754), Expect = 6.680e-99
Identity = 141/214 (65.89%), Postives = 166/214 (77.57%), Query Frame = 0
Query:    1 MDLPPRLARALKLHKKVGPIHSLHVFDFDGTLVRTPGPQEGKRRYILETGKAWTGGWWGRPGSLLPPVVESPFPASRVVRTVFEQMEEVMTRSETAVGVVVTGRIQPVREPVLRILDEICIAAKNDTVAPGESFLDHQAVITHPGGRRTTLQFKEDLFRQLVTEEPLGLCPLKELHIWEDRQAHAEAFATDLNDELMKLKAIKTTVHLVTPETP 214
            M+LP   + AL L +K GPI SLHVFDFDGTLVRTPGP EG+ RY  ETG+ W GGWWGRP SL PPV+ SP P   V+RTVF ++EEVMT+SETAVGVVVTGRI+P+R  VLRILDEIC+AAKNDTVA G SFL H AV THPGGR TTL++K+ LF  L+T+EPL    + ELHIWEDR+ HAE FAT+L+D+L     + TTVH +T ETP
Sbjct:    1 MELPQAFSAALGLDRKAGPISSLHVFDFDGTLVRTPGPAEGRPRYHAETGQQWKGGWWGRPESLCPPVLPSPCPPGYVIRTVFNELEEVMTKSETAVGVVVTGRIKPLRRSVLRILDEICVAAKNDTVAEGVSFLKHDAVFTHPGGRMTTLEYKKALFHTLLTQEPLSNASISELHIWEDRKEHAEVFATELSDDLRNATGVNTTVHYITAETP 214          
BLAST of Ggra1166.t1 vs. uniprot
Match: M2W4C9 (HAD_SAK_1 domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W4C9_GALSU)

HSP 1 Score: 92.0 bits (227), Expect = 2.500e-19
Identity = 63/207 (30.43%), Postives = 100/207 (48.31%), Query Frame = 0
Query:    7 LARALKLHKKVGPIHSLHVFDFDGTLVRTPGPQEGKRRYILETGKAWT-GGWWGRPGSLLPPVVESPFPASRVVRTVFEQMEEVMTRSETAVGVVVTGRIQPVREPVLRILDEICIAAKNDTVAPGESFLDHQAVITHPGGRRTTLQFKEDLFRQLVTEEPLGLCPLKELHIWEDRQAHAEAFATDLNDELMKLKAIKTTVHLVTPE 212
            L R +  H+    +  L VFDFDGTLV+TP P+EGK +Y     + W    WW RP SLLPPV+  P P   V+ +V  Q    + +  T + +V+TGR+  VR  VLRI  ++ +      + P   F   +++         T  +K+ + ++L          ++   I+EDR +    F   L   + K  +I T+++ V  E
Sbjct:   24 LERNILSHRTKESVQQLCVFDFDGTLVKTPCPEEGKEKYHQYYFQPWPFRSWWSRPESLLPPVISHPLPPELVISSVVSQFRY-LDQELTNLCIVLTGRLSTVRPQVLRITQQLDVG-----ILPWRVFCKPESL----HWTTDTFTYKQQVLQELARR----FGDIRRFIIYEDRLSQVNLFKNVLAPNMQKQFSIDTSLYHVKGE 216          
BLAST of Ggra1166.t1 vs. uniprot
Match: A0A7S0Z793 (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z793_9CHLO)

HSP 1 Score: 87.8 bits (216), Expect = 4.360e-18
Identity = 62/186 (33.33%), Postives = 91/186 (48.92%), Query Frame = 0
Query:   23 LHVFDFDGTLVRTPGPQEGKRRYILETGKAWT-GGWWGRPGSLLPPVVESPFPASRVVRTVFEQMEEVMTRSETAVGVVVTGRIQPVREPVLRILDEICIAAKNDTVAPGESFLDHQAVITHPGGRRTTLQFKEDLFRQLVTEEPLGLCPLKELHIWEDRQAHAEAFATDLNDELMKLKAIKTTVH 207
            LHVFDFDGTLV TP P++G R+Y  ETG+ W   GWWGR  SL PP+     PA        ++     TRS+ A  +++TGR   ++  V  ++ E  I+  ++ +  G                  TL +K +  R+LV      +   K + IWEDR +HA AF    + E   ++ + T V 
Sbjct:   22 LHVFDFDGTLVNTPIPEDGMRQYYDETGEQWPFQGWWGRAESLAPPLTMDAGPA-------LDEYRASATRSDVA-RIMMTGRRSKLKASVEAVMREFDISHCHEHIFNGTG--------------HDTLTYKLNELRRLV-----AVYKPKRVRIWEDRTSHAVAFEEFGSREFSHIEWVTTLVE 180          
BLAST of Ggra1166.t1 vs. uniprot
Match: A0A5J4YT13 (HAD_SAK_1 domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YT13_PORPP)

HSP 1 Score: 87.4 bits (215), Expect = 2.590e-17
Identity = 66/198 (33.33%), Postives = 97/198 (48.99%), Query Frame = 0
Query:   20 IHSLHVFDFDGTLVRTPGPQEGKRRYILETGKA--WTGGWWGRPGSLLPPVVESPFPASRVVRTVFEQMEEVMTRSETAVGVVVTGRIQPVREPVLRILDEICIAAKNDTVAPGESFLDHQAVITHPGGRRTTLQFKEDLFRQLVTEE--PLGLCPLKELHIWEDRQAHAEAFATDLNDELMKLKAIKTTVHLVTPET 213
            + +L V DFDGTLV TPGP++G+  Y   TG    W+G WWGRP SL PP+V SP P   ++     Q      +  T   +V+TGR++ +R  V RIL ++ +            FL  +  +    G    L+FK +L   LV  +   L L  +K+L +W+DR      F   L   L + + I    + V+ ET
Sbjct:   48 VTTLDVVDFDGTLVWTPGPEDGRNLYQSCTGVPFPWSG-WWGRPESLRPPLVPSPAPRD-MLNDELAQRLRASWKDPTHFSIVLTGRVEKLRADVERILTDLDMG-----------FLCGEDRLFMKRGSDDVLRFKSNLLLSLVLGDVAALNLSGVKKLVLWDDRIDQVRGFDELLRPRL-EARGIDVDFYHVSKET 231          
BLAST of Ggra1166.t1 vs. uniprot
Match: K8EIK8 (HAD_SAK_1 domain-containing protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EIK8_9CHLO)

HSP 1 Score: 80.1 bits (196), Expect = 4.880e-15
Identity = 62/168 (36.90%), Postives = 85/168 (50.60%), Query Frame = 0
Query:   23 LHVFDFDGTLVRTPGPQEGKRRYILETGKAWTG-GWWGRPGSLLPPVVESPFPASRVVRTVFEQMEEVMTRSETAVGVVVTGRIQPVREPVLRILDEICIAAKNDTVAPGESFLDHQAVITHPGGRRTTLQFK-EDLFRQLVTEEPLGLCPLKELHIWEDRQAHAEAF 188
            L V+DFDGTLV TP P+EGK  Y  + G+AW   GWWGR  SL PP+   P PA       +    E  TR++  V +++TGR++ +   V   L  +  A         E+   H+ V     G   TL++K E+L R +    P      K++ IWEDR  HAE F
Sbjct:   32 LLVYDFDGTLVNTPTPREGKIMYENKIGQAWPHVGWWGRQESLEPPLEVGPGPA-------WASYVENRTRTD-CVRIMMTGRVEKLSRRVTECLRMLEGAT--------ETLCFHELVFKKGNG--DTLEYKCEELRRMVRAYGP------KKVRIWEDRVKHAEGF 175          
BLAST of Ggra1166.t1 vs. uniprot
Match: A0A7S0N596 (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N596_9CHLO)

HSP 1 Score: 71.2 bits (173), Expect = 1.280e-12
Identity = 42/102 (41.18%), Postives = 56/102 (54.90%), Query Frame = 0
Query:   16 KVGPIHSLHVFDFDGTLVRTPGPQEGKRRYILETGKAWT-GGWWGRPGSLLPPVVESPFPASRVVRTVFEQMEEVMTRSETAVGVVVTGRIQPVREPVLRIL 116
            +  P+ ++HVFDFDGTLV TPGP +G R Y   T   W   GWWGR  SL PP+   PFP    +    +    V T     + V++TGR+  ++ PV  IL
Sbjct:    1 RAAPVRAVHVFDFDGTLVCTPGPADGDRLYRQATRCRWPFAGWWGRAESLSPPL-PVPFPPGPAMEAWRQSAGRVGT-----LAVMMTGRLGTLKAPVEAIL 96          
BLAST of Ggra1166.t1 vs. uniprot
Match: A0A8B7D9P6 (uncharacterized protein LOC105843712 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B7D9P6_HYDVU)

HSP 1 Score: 71.2 bits (173), Expect = 9.000e-11
Identity = 55/173 (31.79%), Postives = 84/173 (48.55%), Query Frame = 0
Query:   14 HKKVGP--IHSLHVFDFDGTLVRTPGPQEGKRRYILETGKAWTG-GWWGRPGSLLPPVVESPFPASRVVRTVFEQMEEVMTRSETAVGVVVTGRIQPVREPVLRILDEICIAAKNDTVAPGESFLDHQAVITHPGGRRTTLQFKEDLFRQLVTEEPLGLCP-LKELHIWEDRQ 182
            H  +GP  I SL +FDFDGTL  TPGP +G+  +   TG  W   GW     SLL P+   P P+   ++  +E   +       ++ +++TGR++ VR  VL +L+E  +      + P +             G R T   K +L++Q   E  L   P +KEL  W+DR+
Sbjct:  900 HIYIGPSIIRSLFIFDFDGTLFHTPGPVDGRNAFTKLTGTRWPHKGWLSNVESLLHPLYIYPGPS---LQNYYEHKNK-----SCSLSILLTGRLERVRNGVLAVLNEHELTFSRVMLKPEDG----------GNGYRDT---KVNLYKQEYVESLLKELPTVKELKFWDDRE 1051          
The following BLAST results are available for this feature:
BLAST of Ggra1166.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3J2759.590e-13888.79HAD_SAK_1 domain-containing protein n=1 Tax=Gracil... [more]
R7Q5J86.680e-9965.89HAD_SAK_1 domain-containing protein n=1 Tax=Chondr... [more]
M2W4C92.500e-1930.43HAD_SAK_1 domain-containing protein n=1 Tax=Galdie... [more]
A0A7S0Z7934.360e-1833.33Hypothetical protein n=1 Tax=Ostreococcus mediterr... [more]
A0A5J4YT132.590e-1733.33HAD_SAK_1 domain-containing protein n=1 Tax=Porphy... [more]
K8EIK84.880e-1536.90HAD_SAK_1 domain-containing protein n=1 Tax=Bathyc... [more]
A0A7S0N5961.280e-1241.18Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A8B7D9P69.000e-1131.79uncharacterized protein LOC105843712 n=1 Tax=Hydra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018812Swiss Army Knife RNA repair protein, HAD domainPFAMPF10307HAD_SAK_1coord: 54..212
e-value: 4.6E-8
score: 33.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000237_piloncontigtig00000237_pilon:32875..33519 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1166.t1Ggra1166.t1Gracilaria gracilis GNS1m malemRNAtig00000237_pilon 32875..33519 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1166.t1 ID=Ggra1166.t1|Name=Ggra1166.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=215bp
MDLPPRLARALKLHKKVGPIHSLHVFDFDGTLVRTPGPQEGKRRYILETG
KAWTGGWWGRPGSLLPPVVESPFPASRVVRTVFEQMEEVMTRSETAVGVV
VTGRIQPVREPVLRILDEICIAAKNDTVAPGESFLDHQAVITHPGGRRTT
LQFKEDLFRQLVTEEPLGLCPLKELHIWEDRQAHAEAFATDLNDELMKLK
AIKTTVHLVTPETP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018812SAK_HAD