Ggra1152.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1152.t1
Unique NameGgra1152.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length295
Homology
The following BLAST results are available for this feature:
BLAST of Ggra1152.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 134..148
score: 38.64
coord: 53..68
score: 42.37
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 184..213
e-value: 1.5
score: 17.8
coord: 85..114
e-value: 1.3E-4
score: 31.3
coord: 52..81
e-value: 3.4E-6
score: 36.6
coord: 151..180
e-value: 8.3E-5
score: 32.0
coord: 118..147
e-value: 1.8E-4
score: 30.9
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 123..215
e-value: 1.8E-15
score: 57.3
coord: 26..113
e-value: 1.2E-15
score: 57.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 52..84
score: 14.13176
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 118..150
score: 12.20864
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 184..216
score: 11.19366
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 85..117
score: 11.96825
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 151..183
score: 12.95652
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 147..189
e-value: 1.6E-14
score: 56.2
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 14..146
e-value: 2.1E-38
score: 133.4
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 190..239
e-value: 2.4E-9
score: 39.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 18..225
NoneNo IPR availablePANTHERPTHR24166ROLLING PEBBLES, ISOFORM Bcoord: 22..199
coord: 53..227
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..294
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 52..80
score: 12.752869
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 85..113
score: 11.63855
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 151..182
score: 12.169178
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 118..146
score: 11.612019
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 184..216
score: 9.834415

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000140_piloncontigtig00000140_pilon:162707..163591 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1152.t1Ggra1152.t1Gracilaria gracilis GNS1m malemRNAtig00000140_pilon 162707..163591 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1152.t1 ID=Ggra1152.t1|Name=Ggra1152.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=295bp
MAAGVAVAFAASPAAVNMGCSTELRAAAKCGDLQRVTKHLAHGACVKRTD
DCGRTALHLASRNGCLAVVRVLLAHGADVNDFDDRGRSALHFASHKGRLA
VVKELLEYNADVDDSGGCGYTALHFASLAGRLTVVQALLAHGAEVNKSAH
HARTALHFASQEGHLAVVQALLAHGADVHCADCQGQTPLHYAAHHNEQSA
ALALWRAGADPHRRNDDGLTPLSLLREDSDAAKQMRTSLHLVIDPRLLFP
PPLMPTALRPQRAPSPLHALTELQVNTVLSVCHTIQVEFNERQE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf