Ggra11135.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra11135.t1
Unique NameGgra11135.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length504
Homology
BLAST of Ggra11135.t1 vs. uniprot
Match: A0A2V3J3L0 (NB-ARC domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3L0_9FLOR)

HSP 1 Score: 625 bits (1611), Expect = 7.240e-220
Identity = 303/500 (60.60%), Postives = 381/500 (76.20%), Query Frame = 0
Query:    1 MDIGQSPSSTERHVEDC---KPFARPRLKRRRLGYVRPSFVAVRQNPAHYVLDFSESSTRIERSVCNLVISDKRSVAVVGLPGCGKTVILRGLAYYPEVQRVFRDGICLVHLGPEVTVGATFDYLFEVMHRLRGFTSVKRIQNLLERKQNYDECMESIQRFMKEKRFLLILDNVCECPPDVLHILSILTLRKHARAMGRMTILTSTRSVSIARSFAGTSVLQIRLYRHLDDIARDIFCAHSAFDRSYIDSVCAKKDSPVSFILEKCSGMPLLLAVVGGAIKRLLVNADSEESRNGMWLHYKKYLANNFDQFGEICGLFKMMNACVRDVSSTNDWNVNITARDAVCSLALFKKGIWVPLVILQRLWGLDKKEDAIRIVQSLARLCLVLQEMRKGKVGISIPHIVVDFCSHEAKKGKGIRIWHQRLLNSFLITTANGSPEDGSLLDHV--TTQRSAEEEQYLKENVGYHLSQVLSVSEGGSETSPSFLAAASKFFRNHLADD 495
            MDIGQ  SS     ED    KPFARPRLKRRRL Y+RPSF+AVRQNPAHYVLDFSE STRIER+VCNLV+SDKRSV VVGLPG GKTV+LRGLAY+  V   FRDGICL+HLGPE+T+ +TF +LF+VMHRL G +  KRI+ LL RK ++ +CME++QRF K+KRFLL+LDN+CE  P+VL +LS+L  ++ + A+ +MT+LTSTRSV IAR+F+G SV+QI L+ H DD++ DIFCA             A  DSP   +L +CSG+PL LAVVGGA+KRL + A +EE+++ +W HYK YL NNF QFGEICGLFKM+++CV D+S+T DW ++I  RDA+CSLALFKKG WVP +ILQRLW L+   + ++++Q LARLC +LQE+R G++GISIP IVVD+C   AK+G+GIRIWHQR L SF+ TT   + E+G     V  T+ +S EE QYLK N+ YHLSQVL  SE G+  +PSFLAA S+FFRNHL  D
Sbjct:    1 MDIGQGASSASVENEDPDVGKPFARPRLKRRRLTYMRPSFIAVRQNPAHYVLDFSEDSTRIERTVCNLVLSDKRSVTVVGLPGTGKTVMLRGLAYHSAVMNTFRDGICLIHLGPEITIESTFKHLFDVMHRLGGLSHKKRIETLLRRKNDHIQCMEAVQRFFKDKRFLLMLDNLCESTPEVLQVLSVLATQRRSTAISKMTVLTSTRSVQIARTFSGASVMQIPLHGHFDDVSLDIFCAXXXXXXXXXXXXXASSDSPARVMLRRCSGLPLALAVVGGAVKRLFIKATTEEAKSSIWTHYKNYLTNNFAQFGEICGLFKMLDSCVLDLSNTKDWQLSIKPRDALCSLALFKKGTWVPTIILQRLWSLESHRETVKVIQVLARLCFILQEVRNGQLGISIPDIVVDYCCQLAKQGQGIRIWHQRFLTSFVTTTTKEAMENGESTVKVEKTSTKSNEEAQYLKNNIAYHLSQVLDFSETGTNANPSFLAATSRFFRNHLPQD 500          
BLAST of Ggra11135.t1 vs. uniprot
Match: R7QUJ9 (NB-ARC protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUJ9_CHOCR)

HSP 1 Score: 257 bits (657), Expect = 2.920e-76
Identity = 149/388 (38.40%), Postives = 219/388 (56.44%), Query Frame = 0
Query:   34 RPSFVAVRQNPAHYVLDFSESSTRIERSVCNLVI-SDKRSVAVVGLPGCGKTVILRGLAYYPEVQRVFRDGICLVHLGPEVTVGATFDYLFEVMHRLRGFTSVKRIQNLLERKQNYDECMESIQRFMKEKRFLLILDNVCECPPDVLHILSILTLRKHARAM-------GRMTILTSTRSVSIARSFAGTSVLQIRLYRHLDDIARDIFCAHSAFDRSYIDSVCAKK---DSPVSFILEKCSGMPLLLAVVGGAIKRLLVNADSEESRNGMWLHYKKYLANNFDQFGEICGLFKMMNACVRDVSSTNDWNVNITARDAVCSLALFKKGIWVPLVILQRLWGLDKKEDAIRIVQSLARLCLVLQEMRKGKV-GISIPHIVVDFCSHEAK 409
            RP   +VR NPAHY++ F   ST  E+ V +L+  +D+R V +VGLPG GKTV LR +A+Y  V   FRDGI L+ L P  T  +    L E++ R+ G    K I+  L    ++   ++++   ++ +R LLILDNV   P  +L +L  LT    A A         R+ IL S RSV +AR   G S++ I L   L   ARD+ CAH    R+ +D+ CA     ++P   +L +C+G+PL +AV GGA+KRLLV   + ES   +W HY +YL  +F+QFG+I  LF  + ACV  ++    W + +  ++A+ +L        V    LQ+LWG+  + + +  +  LA  CLV + MR GKV G+ IP I++D+C HEAK
Sbjct:   17 RPPVFSVRPNPAHYLVSFQPGSTSPEQHVVSLLFENDRRLVCLVGLPGSGKTVALRSVAHYAAVHAHFRDGIALLGLAPSTTPASLLADLCELVGRIAGEAPKKDIEQQLASSNSHIGAIDAVANALRHRRVLLILDNVSSSPGIILQLLQRLTHVAMASASLPPKAKTSRLAILASARSVLVARKIGGNSLVHIDLLDPLGSTARDMLCAHLGLPRAELDAHCAVPAVGEAPAKVVLRRCAGLPLAVAVAGGAVKRLLVQDGNRES---IWAHYSEYLTKSFEQFGQISRLFSNVAACVDAIAK---WPLILPVQNALAALVTLPSDTGVSKEKLQKLWGVSNEGEVLAAIDELANQCLVKRIMRDGKVLGMKIPSIIMDYCRHEAK 398          
BLAST of Ggra11135.t1 vs. uniprot
Match: A0A2P6S8V0 (Putative P-loop containing nucleoside triphosphate hydrolase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6S8V0_ROSCH)

HSP 1 Score: 70.5 bits (171), Expect = 2.890e-9
Identity = 66/228 (28.95%), Postives = 107/228 (46.93%), Query Frame = 0
Query:   72 SVAVVGLPGCGKTVILRGLAYYPEVQRVFRDGICLVHLGPEVTVGATFDYLFEVMHRL--RGFTSVKRIQNLLERKQNYDECMESIQRFMKEKRFLLILDNVCECPPDVLHILSILTLRKHAR--AMGRMTILTSTRSVSIARSFAGTSVLQIRLYRHLDDIARDIFCAHSAFDRS-YIDSVCAKKDSPVSFILEKCSGMPLLLAVVGGAIKRLLVNADSEESRNGMW 294
            SVA+VG+PG GKT +   +     +++ +          P+V V  + ++  E + R   R  TS    QN      ++ E  +   R +  KRFL++LD+V     D     S  T++ H R  A G  TIL +TR   +A+    T V  +++    D+   +IF  H    R    D+V AKK      I+EKC+G+PL    +GG ++   V+  +E   + +W
Sbjct:  227 SVAIVGMPGVGKTTVAAHVFIADAMEQFY----------PKVLVSVSHNFNLETVTRAICRKVTSQPSDQN------DFSEVQDDFNRAIAGKRFLIVLDDVWSSTCDYE---SWTTMQSHFRVGAPGS-TILVTTREEKVAKLIGATEVYNLKVLS--DEECLNIFMQHINNHRPPNFDAVFAKK------IVEKCNGLPLAAKTLGGILRCEEVDRWNEVLDDKLW 426          
BLAST of Ggra11135.t1 vs. uniprot
Match: A8ZQA5 (WD-repeat protein n=2 Tax=Acaryochloris marina TaxID=155978 RepID=A8ZQA5_ACAM1)

HSP 1 Score: 64.7 bits (156), Expect = 3.130e-7
Identity = 86/394 (21.83%), Postives = 159/394 (40.36%), Query Frame = 0
Query:   70 KRSVAVVGLPGCGKTVILRGLAYYPEVQRVFRDGICLVHLGPEVTVGATFDYLFEVMHRLRGFTSVKRIQNLLERKQNYDECMESIQRFMKEKRFLLILDNVCECPP-DVLHILSILTLRKHARAMGRMTILTSTRSVSIARSFAGT----SVLQIRLYRHLDDIARDIFCAHSAFDRSYIDSVCAKKDSPVSFILEKCSGMPLLLAVVGGAIKRL---------LVNADSEESRNGMWLHYKKYLANNFDQFGEICGLFKMMNACVRDVSSTNDWNVNITARDAVCSLALFKKGIWVPLVILQRLW---GLDKKEDAIRIVQSLARLCLVLQEMRKGKVGISIPHIVVDFCSHEAKKGKGIRIWHQRLLNSFLITTANG---SPEDGSLLDHV 443
            ++ + V G+ G GK+V+   LAY P+VQ  F DGI  + +G E  + A    L E +   R               ++ +E    +Q   + ++ LLILD+V      +V ++L             + T++ +TR   +      T    SVL        DD A ++  A       ++    ++  S    +  +C  +PL LA  G  ++ L         L ++D E            ++   F  +     +FK ++     ++ TN       A +    LA+F     +P  ++ RLW   G  K+ DA +I+ +L+   ++  E    +  +S+  +  D+   +    K +   HQ LL ++  +   G    P+DG   +H+
Sbjct:  186 QQRIGVQGMGGIGKSVLAAALAYDPQVQAAFPDGIYWLTVGIEPNLLAQQTDLAEALCGERQVF------------EDINEGKTRLQTLWQGRQSLLILDDVWRIDDAEVFNVLG-----------HQSTLVVTTRDSELITGLGATDFSLSVLN-------DDQALELLAA-------WVGVSISELPSQAQAVARECGNLPLALAQCGAMVRDLTPWPHVLSALQDSDLE------------FIQKQFSHYS-YPDVFKALHVSATVLAETNP-----IAAERYQELAVFPADELIPEAVIVRLWQYTGALKERDAGKILTTLSSKGMLRLEGDYPQRQVSLHDLQQDYLQAQQADEKAL---HQELLEAYQQSCTEGWHRGPKDGYFYEHL 521          
BLAST of Ggra11135.t1 vs. uniprot
Match: A8ZQX9 (WD repeat protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) TaxID=329726 RepID=A8ZQX9_ACAM1)

HSP 1 Score: 62.4 bits (150), Expect = 1.660e-6
Identity = 88/393 (22.39%), Postives = 160/393 (40.71%), Query Frame = 0
Query:   70 KRSVAVVGLPGCGKTVILRGLAYYPEVQRVFRDGICLVHLGPEVTVGATFDYLFEVMHRLRGFTSVKRIQNLLERKQNYDECMESIQRFMKEKRFLLILDNVCE-CPPDVLHILSILTLRKHARAMGRMTILTSTRSVSIARSFAGT----SVLQIRLYRHLDDIARDIFCAHSAFDRSYIDSVCAKKDSPVSFILEKCSGMPLLLAVVGGAIKRLLVNADSEESRNGMWLHYKKYLANNF-----DQFGEIC--GLFKMMNACVRDVSSTNDWNVNITARDAVCSLALFKKGIWVPLVILQRLW---GLDKKEDAIRIVQSLARLCLVLQEMRKGKVGISIPHIVVDFC-SHEAKKGKGIRIWHQRLLNSFLITTANG---SPEDGSLLDHV 443
            ++ + V G+ G GK+V+   LAY P+ Q  F DGI  + +G +  + A    L E +   R               ++ +E    +Q   + ++ LLILD+V      +V ++L             + T++ +TR   +      T    SVL        DD A ++  A       ++    +   S    + ++C  +PL LA  G  ++ L             W H    L ++      +QF       +FK ++     ++ TN       A +    LA+F     +P  ++ RLW   G  K+ DA +I+ +L+R  ++  E    +  +S+  +  D+  +  A KG      HQ+LL ++  +   G    P+DG   +H+
Sbjct:  248 QQRIGVQGMGGIGKSVLAAALAYDPQAQAAFPDGIYWLTVGIDPNLLAQQTDLAEALCGERQVF------------EDINEGKNRLQILWQGRQSLLILDDVWRIADAEVFNVLG-----------HQSTLVVTTRDSGLITRLGATDFSLSVLN-------DDQALELLAA-------WVGVPISDLPSQAQAVAKECGNLPLALAQCGAMVRDLTP-----------WPHVLSALQDSDLEFIQEQFSHYPYPDVFKALHISATVLAETNP-----IAAERYQELAVFPADELIPEAVIVRLWQYTGALKERDAGKILTTLSRKGMLRLEGDYPQRQVSLHDLQQDYLQAQRANKGA----LHQQLLEAYQQSCLEGWHKGPKDGYFYEHL 583          
BLAST of Ggra11135.t1 vs. uniprot
Match: A0A8I6ZFV5 (Uncharacterized protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6ZFV5_HORVV)

HSP 1 Score: 61.2 bits (147), Expect = 3.290e-6
Identity = 93/367 (25.34%), Postives = 160/367 (43.60%), Query Frame = 0
Query:   71 RSVAVVGLPGCGKTVILRGLAYYPEVQRVFRDGICLVHLGPEVTVGATF---DYLFEVMHRLRGFTSVKRIQNLLERKQNYDECMESIQRFMKEKRFLLILDNVCECPPDVLHILSILTLRKHARAMGRMTILTSTRSVSIARSFAGTSVLQIRLYRHLDDIAR-------DIFCAHS--AFDRSYIDSVCAKKDSPVSFILEKCSGMPLLLAVVGGAI-KRLLVNADSEESRNGMWLHYKKYLANNFDQFGEICGLFKMMNACVRDVSSTNDWNVNITARDAVCSLALFKKGIWVPLVILQRLWGLD---------KKEDAIRI-VQSLARLCLVLQEMRKGKVG----ISIPHIVVDFCSHEAKK 410
            R+V++V + G GKT + R +    +V++ F D +  V      TV  TF   + L +++ ++ G T        +++ Q Y E    I  F  EKR+L++LD+V E   D    L+  T++    A     IL +TR   +A          +++  H+  + +       ++F + +  ++ RS ID V  + +     + EKC G+PL LAV+GG + K L + A S             Y+   +    +   +  ++    +D+SS N        R     LA F +   + ++ L +LW  +         K E+  R+ V  LA+  LV    R    G    I I  I+ D+C  EA+K
Sbjct:  189 RAVSIVAMGGAGKTTLARKVYTSSKVKQHF-DTVAWV------TVSQTFKGIELLKDILKQITGCT-----HQSVDQMQEY-EVGTKIHAFFSEKRYLVVLDDVWET--DTWEQLNT-TVKAFPDASNGSRILLTTRKEDVA--------YHVQMPTHVHPLQKLDKEKSWELFSSKALPSYRRSLIDDV-EEFEKLGRKLAEKCDGLPLALAVLGGYLSKNLNIQAWS-------------YMLLGWPSTKDTQMMRDILARSYKDLSSQN-------LRSCFLYLAAFPEDFEISVLHLIQLWIAEGFIPHIPNHKLEETARMYVTELAQRSLVQVVHRSKAHGWIEKIRIHDILHDWCIEEARK 510          
BLAST of Ggra11135.t1 vs. uniprot
Match: putative disease resistance protein At3g14460 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8FC234 (putative disease resistance protein At3g14460 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8FC234)

HSP 1 Score: 60.5 bits (145), Expect = 6.640e-6
Identity = 68/219 (31.05%), Postives = 98/219 (44.75%), Query Frame = 0
Query:   73 VAVVGLPGCGKTVILRGLAYYPEVQRVFRDGICLVHLGPEVTVGATFDYLFEVMHRLRGFTSVKRIQNLLERKQNYDECMESIQRFMKEKRFLLILDNVCECPPDVLHILSILTLRKHARAMGRMTILTSTRSVSIARSFAGTSVLQIRLYRHLDDIARDIFCAHSAFDRSYIDSVCAKKDSPVSFILEKCSGMPLLLAVVGGAIKRLLVNADSEESRN 291
            V +VG+ G GKT + R L     VQ  F+       L   V+V A FD +F++   +  F  V + +   E   + D+   +I R +K+KRFL++LD+V     D    L    L  H+ A G   I+T TR   + R      + Q+ +  H D  A  +F  H A      DS    K      I++KC G+PL L  +G    RLL     EE  N
Sbjct:  202 VPIVGMGGVGKTTLARLLYQDTRVQDHFQ-------LKSWVSVSADFD-IFKISKTI--FQDVSKDEKEFE---DLDKLQMAIAREIKDKRFLVVLDDVWNENYDDWERL---VLPFHSGAYGSRVIMT-TRKQQLFRMIVFNHLDQLEILSHED--ALSLFALH-ALGVDNFDSHTPLKPQAEG-IVKKCGGLPLALKAIG----RLLSTKTGEEEWN 395          
The following BLAST results are available for this feature:
BLAST of Ggra11135.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3J3L07.240e-22060.60NB-ARC domain-containing protein n=1 Tax=Gracilari... [more]
R7QUJ92.920e-7638.40NB-ARC protein n=1 Tax=Chondrus crispus TaxID=2769... [more]
A0A2P6S8V02.890e-928.95Putative P-loop containing nucleoside triphosphate... [more]
A8ZQA53.130e-721.83WD-repeat protein n=2 Tax=Acaryochloris marina Tax... [more]
A8ZQX91.660e-622.39WD repeat protein n=1 Tax=Acaryochloris marina (st... [more]
A0A8I6ZFV53.290e-625.34Uncharacterized protein n=1 Tax=Hordeum vulgare su... [more]
putative disease resistance protein At3g14460 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8FC2346.640e-631.05putative disease resistance protein At3g14460 n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00364DISEASERSISTcoord: 158..172
score: 37.67
coord: 263..277
score: 37.0
coord: 72..87
score: 39.38
IPR002182NB-ARCPFAMPF00931NB-ARCcoord: 69..278
e-value: 1.1E-14
score: 54.3
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 336..408
e-value: 2.5E-5
score: 26.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 37..218
e-value: 3.6E-15
score: 57.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 56..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000110_piloncontigtig00000110_pilon:101753..103264 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11135.t1Ggra11135.t1Gracilaria gracilis GNS1m malemRNAtig00000110_pilon 101753..103264 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra11135.t1 ID=Ggra11135.t1|Name=Ggra11135.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=504bp
MDIGQSPSSTERHVEDCKPFARPRLKRRRLGYVRPSFVAVRQNPAHYVLD
FSESSTRIERSVCNLVISDKRSVAVVGLPGCGKTVILRGLAYYPEVQRVF
RDGICLVHLGPEVTVGATFDYLFEVMHRLRGFTSVKRIQNLLERKQNYDE
CMESIQRFMKEKRFLLILDNVCECPPDVLHILSILTLRKHARAMGRMTIL
TSTRSVSIARSFAGTSVLQIRLYRHLDDIARDIFCAHSAFDRSYIDSVCA
KKDSPVSFILEKCSGMPLLLAVVGGAIKRLLVNADSEESRNGMWLHYKKY
LANNFDQFGEICGLFKMMNACVRDVSSTNDWNVNITARDAVCSLALFKKG
IWVPLVILQRLWGLDKKEDAIRIVQSLARLCLVLQEMRKGKVGISIPHIV
VDFCSHEAKKGKGIRIWHQRLLNSFLITTANGSPEDGSLLDHVTTQRSAE
EEQYLKENVGYHLSQVLSVSEGGSETSPSFLAAASKFFRNHLADDVSGST
QPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002182NB-ARC
IPR036388WH-like_DNA-bd_sf
IPR027417P-loop_NTPase