Ggra11130.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra11130.t1
Unique NameGgra11130.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length296
Homology
BLAST of Ggra11130.t1 vs. uniprot
Match: A0A2V3J4P6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4P6_9FLOR)

HSP 1 Score: 300 bits (767), Expect = 1.680e-98
Identity = 157/299 (52.51%), Postives = 211/299 (70.57%), Query Frame = 0
Query:    1 MKSPNVPLLSVTLLIVLLLILFSSGRYESILPKLTTAT----EEQYLPYPDGSNLSPLNASLLVKPTERKTCIVYERPPRTGSTTIGEAVRKCLLPQGYKQPAWKGFDARASVISDMLQLPFERVMTVTHHFYMNATTLRQLQSGCETLFYFTSTATMKQRLWSLVKYRQLHKHGNASLSKEQVQSAIADLKKEKQQIKVLNAYPYLYNLSKAVNMGQIERIVPDYVIRKSRLVDDSSALLRAFGCSAQVISQNVHRARYDDVLDNIDIDDDDALYSRLLHYAEDRNELGLKKAFDFGR 295
            MKS N P++ VTL  VLL++L  SG+Y  +LP+LT +     E+Q+L +  GS+LS  +           TC++Y+RPPRT STTIG A+ KCL P GY+QP W+G D R+ ++ +ML+LPFERV  +  HFYMN+T+L +L++GC+ LFY TSTA MK+RLWSLVKYRQ+ KHGN+SL++ Q+ +A+ DL+KE  QI+VLNAYPYL      +N   I+ I PDYVIRKS+L +D S LLRAFGC  + +S+N+H   +   LD I IDDDD L+ R+L  A  RN++GLKKA DF R
Sbjct:    1 MKSSNAPIVVVTLF-VLLIVLLVSGQYTHLLPQLTLSDTDSPEQQFLSH--GSSLSSPH-----------TCVIYDRPPRTASTTIGNALEKCLEPLGYEQPDWQGMDGRSLMVLNMLRLPFERVSLLARHFYMNSTSLLELRTGCDALFYITSTAPMKERLWSLVKYRQVTKHGNSSLNETQLFAALQDLRKETVQIEVLNAYPYLQTHETPINRSTIDTITPDYVIRKSQLNEDMSKLLRAFGCETRFVSENIHLLEHASGLDKITIDDDDGLHERMLRLARQRNDVGLKKAADFAR 285          
BLAST of Ggra11130.t1 vs. uniprot
Match: A0A2V3J1M7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1M7_9FLOR)

HSP 1 Score: 142 bits (358), Expect = 3.940e-37
Identity = 90/229 (39.30%), Postives = 126/229 (55.02%), Query Frame = 0
Query:   68 CIVYERPPRTGSTTIGEAVRKCLLPQGYKQPAW-KGFDARASVISDMLQLPFERVMTVTHHFYMNATTLRQLQSGCETLFYFTSTATMKQRLWSLVKYRQLHKHGNASLSKEQVQSAIADLKKEKQQIKVLNAYPYLYNLSKAVNMGQIERIVPDYVIRKSRLVDDSSALLRAFGCSAQVISQNVHRARYDD--VLDNIDIDDDDALYSRLLHYAEDRNELGLKKAFDF 293
            C +Y+RPPRT STTIG A++ CL    ++QP   K   A    I D LQ P  R   ++ HFY+N+ T+  L+  C TLFY TS A +++RL S  KY     HGN++L  +Q+ +A        +Q + LN YPY+ +  K +N+     +VP+YVIRK  L  D + LL+   C    +S NVHRA  D+  +L +I   DD  LY  L   A   N LGL++   F
Sbjct:   49 CFIYDRPPRTASTTIGTALQSCLRRHHFRQPPREKQRSAIPYTIFDNLQTP--RKALLSRHFYLNSRTVSLLRKRCSTLFYITSCAPIEERLLSASKYTLSGGHGNSTLDDQQMHAAAEKANSSTRQKRFLNHYPYVDDDKKPINVST--PLVPNYVIRKPHLRQDLTKLLQTLQCDTSFVSGNVHRAPADESQILQHITAGDD-TLYQTLARRALSHNALGLQQLKQF 272          
The following BLAST results are available for this feature:
BLAST of Ggra11130.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J4P61.680e-9852.51Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1M73.940e-3739.30Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 177..197
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..295
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..25
NoneNo IPR availableTMHMMTMhelixcoord: 7..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000110_piloncontigtig00000110_pilon:86964..87851 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11130.t1Ggra11130.t1Gracilaria gracilis GNS1m malemRNAtig00000110_pilon 86964..87851 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra11130.t1 ID=Ggra11130.t1|Name=Ggra11130.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=296bp
MKSPNVPLLSVTLLIVLLLILFSSGRYESILPKLTTATEEQYLPYPDGSN
LSPLNASLLVKPTERKTCIVYERPPRTGSTTIGEAVRKCLLPQGYKQPAW
KGFDARASVISDMLQLPFERVMTVTHHFYMNATTLRQLQSGCETLFYFTS
TATMKQRLWSLVKYRQLHKHGNASLSKEQVQSAIADLKKEKQQIKVLNAY
PYLYNLSKAVNMGQIERIVPDYVIRKSRLVDDSSALLRAFGCSAQVISQN
VHRARYDDVLDNIDIDDDDALYSRLLHYAEDRNELGLKKAFDFGR*
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