Ggra11090.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra11090.t1
Unique Name	Ggra11090.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	826

Homology

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BLAST of Ggra11090.t1 vs. uniprot
Match: R7QIX0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIX0_CHOCR)

HSP 1 Score: 169 bits (427), Expect = 1.240e-39
Identity = 124/353 (35.13%), Postives = 178/353 (50.42%), Query Frame = 0

Query:    8 SPWLKNYLIGALSEPPQTPSLNASYLLATTPVTHRRTLSCFDGAHSVSVVLSQCVASTLDADEEGTGVTTRNLLGYILAPVQAVVLTDMTTSPPSATLLLKDMRVFSERRHQRPPGIPLGVDKDPEVVTALRANIGRQLAAF--NDLPEKGNQPQSDAELVAVFGKLEN--DSPPFPP----------RNLFIETDTFGLSCAEDEPLGNGIANGLPQANDDED----DELVIDPKDLELLDPDPLPILGAITPSTATPQSAARSNSARITRDNNAASNAESHGNEPEEQNANGFDDVSEMQNGPIERTSETQSQKSKEHSVHDAFTVEERPLTQHFIFDDENVESAHGASEA 342
            +PWLK YL+ ALS  P++ SL+ SYL   + VT RR L  +DG H+   VLSQ  AS LDAD +  GVTT NL+GY++APV AVV+ D +T+PP+ATL+L+D+RVF+++  QRPPG    VD+DPEV+  LRA++GR+LA F       +      DA L  +    +N  D+P  PP          R+L  +        A D+P  +  AN  P   D +     +  V D  + E+ + D   +LG              +  A     + +   +        E+ A   +DV     G  +    +Q Q   E   H+  + E  PLTQHF  DD+  E A G ++A
Sbjct:   65 TPWLKPYLMHALSPTPRSSSLDGSYLQVISAVTARRKLRVYDGLHTAEAVLSQAAASNLDADVDDLGVTTHNLVGYLVAPVAAVVVPDASTTPPTATLVLQDVRVFADQFAQRPPGALPPVDRDPEVLDCLRASVGRKLATFATRSTFARDEVDAGDAHLAELTDVFDNILDNPALPPKAVVDNLANFRSLHSDAPLPHSPAAADKPAPSNDANPSPGKKDLQTTTNAERDVFDESEDEMPELDMHHVLGVQNGDDEDKGDPKGNEGASQNDQDMSEKKSSGXXXXXXEERAGEEEDV-----GDWDIRFSSQEQADVEGGEHECISGEAMPLTQHFPIDDDEEEDAEGKADA 412

The following BLAST results are available for this feature:

BLAST of Ggra11090.t1 vs. uniprot

BLAST of Ggra11090.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
R7QIX0	1.240e-39	35.13	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 791..825
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 462..510
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 680..721
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 793..807
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 530..545
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 242..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 435..461
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..300
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..351
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 559..645
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..756

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000207_pilon	contig	tig00000207_pilon:91724..94201 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra11090.t1	Ggra11090.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000207_pilon 91724..94201 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra11090.t1 ID=Ggra11090.t1|Name=Ggra11090.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=826bp
MPLLPGSSPWLKNYLIGALSEPPQTPSLNASYLLATTPVTHRRTLSCFDG
AHSVSVVLSQCVASTLDADEEGTGVTTRNLLGYILAPVQAVVLTDMTTSP
PSATLLLKDMRVFSERRHQRPPGIPLGVDKDPEVVTALRANIGRQLAAFN
DLPEKGNQPQSDAELVAVFGKLENDSPPFPPRNLFIETDTFGLSCAEDEP
LGNGIANGLPQANDDEDDELVIDPKDLELLDPDPLPILGAITPSTATPQS
AARSNSARITRDNNAASNAESHGNEPEEQNANGFDDVSEMQNGPIERTSE
TQSQKSKEHSVHDAFTVEERPLTQHFIFDDENVESAHGASEASESSEDQD
MGDLHLGTQFDVMALENNDGDNKLVQSDTEGELKKSKAVTVSQTAPKKRA
GDGELQFAPKSANNRKKSAVAKSGTGRRDIGRDPSKSVANQQPTDNTMAI
TRATRSTTKQVSSDKKQPEEDVENQAGKDDKGPLTRNAAPEVDEEREDDR
TEDQGKKEAVPGAEKQGTVESATETPVKDSALGEAEHEEEHQPSSPRVKT
QQPGGSEIPDESEPKEDEHQIKPSQAEKDSEEPEKDPERDPEKDPEKDPE
KDPEKDPEKDPEKEPEKEPQKEPAKEAEESEKEVEKAPEHSLPTDAVEDN
DEDDAQKEQGQEVDEPKTPAVEEAGETVVEEQERDMQKMDVSEFNEKPRQ
SKKRPSPPPHAMPEEDVIEPKQPTEMNLSTESRVGVVAPKIGNPGKKTKR
QRNGEDYHLEKIQAELQVIKDFREKVDRNTEMFILNPEHFLPGKTRRSVD
RSRRESYPAPRISQVSGLNSDRVAR*