Ggra11075.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra11075.t1
Unique NameGgra11075.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length131
Homology
BLAST of Ggra11075.t1 vs. uniprot
Match: A0A2V3J336 (ATP-dependent Clp protease adapter protein ClpS n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J336_9FLOR)

HSP 1 Score: 253 bits (647), Expect = 3.140e-85
Identity = 124/130 (95.38%), Postives = 128/130 (98.46%), Query Frame = 0
Query:    1 MADISKPRPGVGGPKGPQFGEADRGGGVAVITKPVTKKKTKRKSQTEYEPSWRVLLHNDDVHTFDYVTGAIVKVVRTVSRKKAHRITMQAHASGVATVTTTWKVQAEEYCKGLQMQGLTSSIAPDSSFTH 130
            MADISKPRPG+GGPKGPQFG++DRGGGVAVITKPVTKKKTKRKSQT+YEPSWRVLLHNDDVHTFDYVTGAIVKVVRTVSRKKAHRITMQAHASGVATVTTTWK QAEEYCKGLQM GLTSSIAPDSSFTH
Sbjct:    6 MADISKPRPGIGGPKGPQFGDSDRGGGVAVITKPVTKKKTKRKSQTQYEPSWRVLLHNDDVHTFDYVTGAIVKVVRTVSRKKAHRITMQAHASGVATVTTTWKAQAEEYCKGLQMHGLTSSIAPDSSFTH 135          
BLAST of Ggra11075.t1 vs. uniprot
Match: A0A7S1T7M9 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T7M9_9RHOD)

HSP 1 Score: 191 bits (484), Expect = 4.510e-60
Identity = 98/130 (75.38%), Postives = 112/130 (86.15%), Query Frame = 0
Query:    1 MADISKPRPGVGGPKGPQFGEADRGGGVAVITKPVTKKK--TKRKSQTEYEPSWRVLLHNDDVHTFDYVTGAIVKVVRTVSRKKAHRITMQAHASGVATVTTTWKVQAEEYCKGLQMQGLTSSIAPDSSF 128
            MADI +PRP VGG KGP FG +++G GV ++ +P+ KKK  T+R+ QT+ EPSWRVLLHNDDVHTFDYVT +IVKVVRT+SRKKAHRITMQAH+ GVATVTTTWK  AEEYCKGLQM GLTSSIAPDSSF
Sbjct:   28 MADIGRPRPDVGGGKGPTFG-SEKGSGV-LVAEPIVKKKPKTRREEQTDKEPSWRVLLHNDDVHTFDYVTMSIVKVVRTISRKKAHRITMQAHSQGVATVTTTWKALAEEYCKGLQMHGLTSSIAPDSSF 155          
BLAST of Ggra11075.t1 vs. uniprot
Match: A0A7S0ZKG5 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZKG5_9RHOD)

HSP 1 Score: 182 bits (462), Expect = 2.450e-56
Identity = 91/128 (71.09%), Postives = 105/128 (82.03%), Query Frame = 0
Query:    1 MADISKPRPGVGGPKGPQFGEADRGGGVAVITKPVTKKKTKRKSQTEYEPSWRVLLHNDDVHTFDYVTGAIVKVVRTVSRKKAHRITMQAHASGVATVTTTWKVQAEEYCKGLQMQGLTSSIAPDSSF 128
            MADI + +P +GG K   F +    GGV  I KP  KKK+KR+ +T+ EP+WRVLLHNDDVHTFDYVTG IVKVV+TVSR+KAHRITMQAH+ G+ATVTTTWK  AEEYCKGLQ+QGLTSSIAPDSSF
Sbjct:   60 MADIGRSKPNIGGGK---FEQDTGKGGVVTIQKPEVKKKSKREEKTDREPNWRVLLHNDDVHTFDYVTGVIVKVVKTVSRRKAHRITMQAHSHGIATVTTTWKAMAEEYCKGLQVQGLTSSIAPDSSF 184          
BLAST of Ggra11075.t1 vs. uniprot
Match: A0A7S1TKB3 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKB3_9RHOD)

HSP 1 Score: 181 bits (459), Expect = 8.710e-56
Identity = 94/130 (72.31%), Postives = 105/130 (80.77%), Query Frame = 0
Query:    1 MADISKPRPGVGGPKGPQFGEADRGG--GVAVITKPVTKKKTKRKSQTEYEPSWRVLLHNDDVHTFDYVTGAIVKVVRTVSRKKAHRITMQAHASGVATVTTTWKVQAEEYCKGLQMQGLTSSIAPDSSF 128
            MADI + +P +GG K   F   D GG  GV  I KP  KKK+KR+ QT+ EP+WRVLLHNDDVHTFDYVTG+IVKVV+TVSR+KAHRITM AH+ GVATVTTTWK  AEEYCKGLQM GLTSSIAPDSSF
Sbjct:   65 MADIGRSKPNIGGGK---FQREDTGGKGGVVTIQKPEVKKKSKREEQTDREPNWRVLLHNDDVHTFDYVTGSIVKVVKTVSRRKAHRITMTAHSFGVATVTTTWKALAEEYCKGLQMTGLTSSIAPDSSF 191          
BLAST of Ggra11075.t1 vs. uniprot
Match: A0A5J4Z744 (ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z744_PORPP)

HSP 1 Score: 176 bits (446), Expect = 1.090e-53
Identity = 91/129 (70.54%), Postives = 102/129 (79.07%), Query Frame = 0
Query:    1 MADISKPRPGVGGPKGPQFGEADRGGGVAVITKPVTKKKTKRKSQTEYEPSWRVLLHNDDVHTFDYVTGAIVKVVRTVSRKKAHRITMQAHASGVATVTTTWKVQAEEYCKGLQMQGLTSSIAPDSSFT 129
            MADI K  P +GG K   F +    G V  I KP  KKK++RKS+TE E +WRVLLHNDDVHTFDYVTG IV+VVRTVSR+KAHRITM AH+ G+ATVTTTWK  AEEYCKGLQ QGLTSSIAPDSSF+
Sbjct:   76 MADIGKGSPNIGGGK---FEQDTSRGNVITIQKPEVKKKSERKSETEKEKNWRVLLHNDDVHTFDYVTGIIVQVVRTVSRRKAHRITMTAHSHGIATVTTTWKAMAEEYCKGLQRQGLTSSIAPDSSFS 201          
BLAST of Ggra11075.t1 vs. uniprot
Match: M1VIC4 (ClpS domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VIC4_CYAM1)

HSP 1 Score: 151 bits (381), Expect = 1.040e-43
Identity = 80/124 (64.52%), Postives = 94/124 (75.81%), Query Frame = 0
Query:    7 PRPGVGGPKGPQFGEADR-GGGVAVITKPVTKKKTKRKSQTEYEPSWRVLLHNDDVHTFDYVTGAIVKVVRTVSRKKAHRITMQAHASGVATVTTTWKVQAEEYCKGLQMQGLTSSIAPDSSFT 129
            P  G G P G + GE +R GGGVAVITK  TK   + K +T  EP WRVLLHND++HTFDYVT  +VKVV+T++R KAHRIT+ AH +GVATVTTTWK  AEEYC+GLQ +GLTSSI PD S T
Sbjct:   89 PGTGAGAPGGDESGEREREGGGVAVITK--TKPAVREKEKTAKEPMWRVLLHNDNIHTFDYVTHTLVKVVKTLTRYKAHRITVHAHKAGVATVTTTWKQLAEEYCQGLQREGLTSSIMPDHSGT 210          
BLAST of Ggra11075.t1 vs. uniprot
Match: A0A7J7IDU9 (ClpS domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IDU9_9RHOD)

HSP 1 Score: 149 bits (377), Expect = 4.200e-43
Identity = 79/124 (63.71%), Postives = 94/124 (75.81%), Query Frame = 0
Query:    7 PRPGVGGPKGPQFGEADR-GGGVAVITKPVTKKKTKRKSQTEYEPSWRVLLHNDDVHTFDYVTGAIVKVVRTVSRKKAHRITMQAHASGVATVTTTWKVQAEEYCKGLQMQGLTSSIAPDSSFT 129
            P  G G P G + G+ +R GGGVAVITK  TK   + K +T  EP WRVLLHND++HTFDYVT  +VKVV+T++R KAHRIT+ AH +GVATVTTTWK  AEEYC+GLQ +GLTSSI PD S T
Sbjct:   89 PGRGAGAPGGDESGDREREGGGVAVITK--TKPAVREKEKTAKEPMWRVLLHNDNIHTFDYVTYTLVKVVKTLTRYKAHRITVHAHKAGVATVTTTWKQLAEEYCQGLQREGLTSSIMPDHSST 210          
BLAST of Ggra11075.t1 vs. uniprot
Match: L1J9P0 (ClpS domain-containing protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1J9P0_GUITC)

HSP 1 Score: 145 bits (366), Expect = 1.150e-41
Identity = 79/120 (65.83%), Postives = 88/120 (73.33%), Query Frame = 0
Query:   11 VGGPKGPQFGEADRGGG--VAVITKPVTKKKT---KRKSQTEYEPSWRVLLHNDDVHTFDYVTGAIVKVVRTVSRKKAHRITMQAHASGVATVTTTWKVQAEEYCKGLQMQGLTSSIAPD 125
            VGG  GP F +   GGG  VAV+TKP    K    ++K Q + EP WRVLLHNDDVHTFDYV   IVKVVRTV+RKKAHRITM+AH SG+ATVTTTWK  A EY  GLQ  GLTSSIAP+
Sbjct:   71 VGGKGGPDFSKDQEGGGAGVAVLTKPPDLDKAADYEKKEQVDKEPIWRVLLHNDDVHTFDYVIDTIVKVVRTVTRKKAHRITMEAHKSGLATVTTTWKQLAREYSLGLQKAGLTSSIAPE 190          
BLAST of Ggra11075.t1 vs. uniprot
Match: A0A7S0P2A3 (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P2A3_9EUKA)

HSP 1 Score: 137 bits (345), Expect = 1.740e-38
Identity = 72/113 (63.72%), Postives = 83/113 (73.45%), Query Frame = 0
Query:   13 GPKGPQFGEADRGGGVAVITKPVTKKKTKRKSQTEYEPSWRVLLHNDDVHTFDYVTGAIVKVVRTVSRKKAHRITMQAHASGVATVTTTWKVQAEEYCKGLQMQGLTSSIAPD 125
            G  G + GE  RG   AVI +P    K + K + E EPSWRVLLHNDDVHTFDYVT AIV+VV+T++RKKAHRIT+Q H+ G ATVTTTWK  A+ YC  LQ  GLTSSIAPD
Sbjct:   75 GGDGGREGERQRGR-TAVIARPKPVTKERSKEEVENEPSWRVLLHNDDVHTFDYVTMAIVQVVKTITRKKAHRITVQCHSMGTATVTTTWKQMAKTYCLKLQKYGLTSSIAPD 186          
BLAST of Ggra11075.t1 vs. uniprot
Match: A0A7S0TM92 (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TM92_HEMAN)

HSP 1 Score: 134 bits (337), Expect = 2.980e-38
Identity = 72/110 (65.45%), Postives = 83/110 (75.45%), Query Frame = 0
Query:   21 EADRGG-GVAVITKPVTKKKT---KRKSQTEYEPSWRVLLHNDDVHTFDYVTGAIVKVVRTVSRKKAHRITMQAHASGVATVTTTWKVQAEEYCKGLQMQGLTSSIAPDS 126
            E ++GG GVAV+TKP    K    ++K   + EP WRVLLHNDDVHTFDYV   IVKVVRTV+RKKAHRITM+AH SG+ATVTTTWK  A EY   LQ  GLTSSIAP++
Sbjct:    4 EGEKGGAGVAVLTKPPDLDKASDLEKKEAVDKEPIWRVLLHNDDVHTFDYVIDTIVKVVRTVTRKKAHRITMEAHKSGLATVTTTWKQLAREYSVKLQKAGLTSSIAPEN 113          
The following BLAST results are available for this feature:
BLAST of Ggra11075.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3363.140e-8595.38ATP-dependent Clp protease adapter protein ClpS n=... [more]
A0A7S1T7M94.510e-6075.38Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0ZKG52.450e-5671.09Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S1TKB38.710e-5672.31Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A5J4Z7441.090e-5370.54ATP-dependent Clp protease adapter protein ClpS n=... [more]
M1VIC41.040e-4364.52ClpS domain-containing protein n=1 Tax=Cyanidiosch... [more]
A0A7J7IDU94.200e-4363.71ClpS domain-containing protein n=1 Tax=Cyanidiococ... [more]
L1J9P01.150e-4165.83ClpS domain-containing protein n=2 Tax=Geminigerac... [more]
A0A7S0P2A31.740e-3863.72Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S0TM922.980e-3865.45Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003769Adaptor protein ClpS, corePFAMPF02617ClpScoord: 49..115
e-value: 9.9E-18
score: 63.7
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 29..124
e-value: 1.5E-21
score: 77.9
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 45..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availablePANTHERPTHR33473:SF1ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTICcoord: 26..126
IPR022935ATP-dependent Clp protease adaptor protein ClpSPANTHERPTHR33473ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTICcoord: 26..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000207_piloncontigtig00000207_pilon:54309..54790 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11075.t1Ggra11075.t1Gracilaria gracilis GNS1m malemRNAtig00000207_pilon 54309..54790 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra11075.t1 ID=Ggra11075.t1|Name=Ggra11075.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=131bp
MADISKPRPGVGGPKGPQFGEADRGGGVAVITKPVTKKKTKRKSQTEYEP
SWRVLLHNDDVHTFDYVTGAIVKVVRTVSRKKAHRITMQAHASGVATVTT
TWKVQAEEYCKGLQMQGLTSSIAPDSSFTH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003769ClpS_core
IPR014719Ribosomal_L7/12_C/ClpS-like
IPR022935ClpS