Ggra11022.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra11022.t1
Unique NameGgra11022.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length472
Homology
BLAST of Ggra11022.t1 vs. uniprot
Match: A0A2V3J669 (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J669_9FLOR)

HSP 1 Score: 509 bits (1312), Expect = 9.720e-176
Identity = 258/466 (55.36%), Postives = 338/466 (72.53%), Query Frame = 0
Query:    1 MRSVLFACALLPLVLASPFLDARAHRAVGATVRAEEEQPRAADVDGATFVLVARSKGCVNEIEHGIVAFPPFEAGVSLALNLSPPEALIPFDNITVAGDTCTRDALHDVLALYDPSKIALTDVGVDADDIPHIYLAGVDAAARICAPFQYEPRVYLYTSQLQHLFRANQRFGGVQIEVSERTLEPEHNAMYMLSIPRNQTENACLYRRRTV----SGEGPAMT----PSKDEEPESSAEADXXXXXXXXXXSXXXXXXXXXXPQLAPQPVGPSTFSAAKEEAVLEEEKEAQLARGSGNKCFPASATVQLDDGQRIPMSQLQIGHRVLVAPGVFSPVFMFTHKLNNIVSDFVHIRTHRGDRLSVTASHFIYLDSKLIPAGNAAIGQQVQLEDGALSTVSQVSVVQHSGLYNPQTLHGDIIVDNIRASTYTDAVQPVVAHSFLAPLRFLFDKFAVYTSHFDNGGDTLI 458
            MR ++ A   +PLV+A+P++  + H     T  +    PR AD++ +TFVLV +++GC+N I HGIV +PPFE GV+LALNLSPPEALIPFDNI+V+G TC+ + LH+VLALYDPSKIALTDVGV+ADDIPHIY+AGVDA +R C   + EPRVYL+TS LQHLFRANQR GGV++++SER++E +  A YMLS+PR++++NACLYRRR +    S + PA+     PS +E+ ES+AE +                           P  P+TFS A +EA   EE+EA     S +KCFP SA VQL++G RIPMS ++IGHRVLVAP  FS VFMFTH+++N++S+F+ IRT  G+ LS+TASH+IYLDS L+PA  A  GQQVQL DG +S ++ VS V+ SGLYNPQTLHGDI+VDNIR S+YTDAV+P +AHS LAPLR +FD+F  Y +  +NGG T++
Sbjct:    1 MRGLILALLTIPLVVATPYIVEKRHAVHEDTPASTSPLPREADIENSTFVLVTKTEGCINRISHGIVRYPPFEPGVALALNLSPPEALIPFDNISVSGQTCSHEDLHEVLALYDPSKIALTDVGVNADDIPHIYVAGVDAGSRTCGKSRLEPRVYLFTSNLQHLFRANQRLGGVELDISERSVEDDPKAAYMLSVPRSKSQNACLYRRRPLHIPESAKEPAIRDDPRPSPEEDDESTAETEEPNSGSETLSG----------------PERPNTFSVANDEAQKLEEQEALK---SEDKCFPGSAMVQLENGHRIPMSDVRIGHRVLVAPETFSTVFMFTHRVDNVLSEFIQIRTETGEILSLTASHYIYLDSSLVPAKYATTGQQVQLSDGRVSFITAVSTVRDSGLYNPQTLHGDIVVDNIRVSSYTDAVKPHIAHSMLAPLRAVFDRFGFYVTGLENGGGTVL 447          
BLAST of Ggra11022.t1 vs. uniprot
Match: R7QIA6 (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIA6_CHOCR)

HSP 1 Score: 173 bits (438), Expect = 4.240e-45
Identity = 81/169 (47.93%), Postives = 119/169 (70.41%), Query Frame = 0
Query:  292 CFPASATVQLDDGQRIPMSQLQIGHRVLVAPGVFSPVFMFTHKLNNIVSDFVHIRTHRGDRLSVTASHFIYLDSKLIPAGNAAIGQQVQLEDGALSTVSQVSVVQHSGLYNPQTLHGDIIVDNIRASTYTDAVQPVVAHSFLAPLRFLFDKFAVYTSHFDNGGDTLISI 460
            CFPA A+V+L++G    M+Q+++G RV VA G FS VFMFTHK  + V DFV I T  G  LS T  H+IY+++    AG+A +G  ++L DG+ + VS V +V+ +GL+NPQT+HGDIIV+++RAST+T  ++P  A + LAPLR L+D F + T+  +NG D++ S+
Sbjct:  285 CFPADASVELENGSFKTMAQVELGDRVKVADGSFSDVFMFTHKDASAVHDFVRISTRSGASLSATRGHYIYINNAFAAAGSAKVGDTLELGDGSKTLVSNVGIVKGTGLFNPQTVHGDIIVNSVRASTFTRTIEPSAAQAMLAPLRMLYDTFGISTAFLNNGADSIASV 453          
BLAST of Ggra11022.t1 vs. uniprot
Match: A0A2V3IRZ6 (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRZ6_9FLOR)

HSP 1 Score: 169 bits (427), Expect = 1.220e-43
Identity = 84/166 (50.60%), Postives = 114/166 (68.67%), Query Frame = 0
Query:  292 CFPASATVQLDDGQRIPMSQLQIGHRVLVAPGVFSPVFMFTHKLNNIVSDFVHIRTHRGDRLSVTASHFIYLDSKLIPAGNAAIGQQVQLEDGALSTVSQVSVVQHSGLYNPQTLHGDIIVDNIRASTYTDAVQPVVAHSFLAPLRFLFDKFAVYTSHFDNGGDTL 457
            CFPA ATV+++DG    M Q+QIG RV V   +FS VFMFTHK++  VS FV +    G  +S T+ H++YL+ +L  A  A +G  ++L +GA STV +VS+V+ SGLYNPQTLHGDIIV+ +RAST+T A++   A + LAPLR ++D F   TS FD G D +
Sbjct:  272 CFPAEATVEMEDGSTKRMDQVQIGDRVKVGYDMFSEVFMFTHKVSKRVSQFVKLDMASGASISATSGHYVYLNGRLAAARTAKVGDVMELGNGARSTVEKVSMVRKSGLYNPQTLHGDIIVNEVRASTFTTAIEAGTAQAMLAPLRMVYDVFGWSTSAFDGGFDMI 437          
BLAST of Ggra11022.t1 vs. uniprot
Match: A0A2V3IX71 (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX71_9FLOR)

HSP 1 Score: 167 bits (424), Expect = 6.700e-43
Identity = 80/168 (47.62%), Postives = 113/168 (67.26%), Query Frame = 0
Query:  292 CFPASATVQLDDGQRIPMSQLQIGHRVLVAPGVFSPVFMFTHKLNNIVSDFVHIRTHRGDRLSVTASHFIYLDSKLIPAGNAAIGQQVQLEDGALSTVSQVSVVQHSGLYNPQTLHGDIIVDNIRASTYTDAVQPVVAHSFLAPLRFLFDKFAVYTSHFDNGGDTLIS 459
            CFPA ATVQL+DG    M  +Q+G RV+V  G+FSPVFMFTHKL+ +   FV+I+T  G+ LS+T  H++Y++  L  A     G  + L D +L+ V+QVS V  +GL+NPQTLHGDI+V+ ++ASTYT AV+P +AH+ L+PLR  + +       F+ G D + S
Sbjct:  310 CFPADATVQLEDGSAKKMGDVQLGDRVMVDHGIFSPVFMFTHKLSTVRYGFVNIQTSSGNTLSLTPGHYLYVNGHLSAASTVKNGDTLMLADSSLTDVTQVSTVTSTGLFNPQTLHGDIVVNGLKASTYTTAVEPGLAHALLSPLRAAYSRLGFSLRAFEAGADRIAS 477          
BLAST of Ggra11022.t1 vs. uniprot
Match: warthog protein 6-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDBBD (warthog protein 6-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDBBD)

HSP 1 Score: 154 bits (390), Expect = 1.090e-39
Identity = 77/172 (44.77%), Postives = 109/172 (63.37%), Query Frame = 0
Query:  288 SGNKCFPASATVQLDDGQRIPMSQLQIGHRVLVAPGVFSPVFMFTHKLNNIVSDFVHIRTHRGDRLSVTASHFIYLDSKLIPAGNAAIGQQVQLEDGALSTVSQVSVVQHSGLYNPQTLHGDIIVDNIRASTYTDAVQPVVAHSFLAPLRFLFDKFAVYTSHFDNGGDTLIS 459
            +G+ CFP SA V+L+ G R  M +++IG RV V    FS VFMFTHK +  + DFV I T  G  +S+T  H+I+++  L  A   A+G  +QL  G  + V+ V+ VQ  G+YNPQTLHGDI+V  IR STYT AV+P +AH+ L  +R ++  F +  S F+ G D++ S
Sbjct:  128 NGSSCFPGSAMVELESGARQRMDKMKIGDRVKVGRAEFSEVFMFTHKTHTGIYDFVKITTSSGHSVSLTGGHYIHVNGGLAAASVVAVGDMLQLGTGEATEVTDVTCVQSKGIYNPQTLHGDIVVGGIRVSTYTTAVEPRLAHAGLGAIRSMYRIFGLTFSMFEQGADSIAS 299          
BLAST of Ggra11022.t1 vs. uniprot
Match: A0A2V3IGP9 (Warthog protein 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGP9_9FLOR)

HSP 1 Score: 154 bits (389), Expect = 5.310e-38
Identity = 83/196 (42.35%), Postives = 118/196 (60.20%), Query Frame = 0
Query:  268 SAAKEEAVLEEE---KEAQLARGSGNKCFPASATVQLDDGQRIPMSQLQIGHRVLVAPGVFSPVFMFTHKLNNIVSDFVHIRTHRGDRLSVTASHFIYLDSKLIPAGNAAIGQQVQLEDGALSTVSQVSVVQHSGLYNPQTLHGDIIVDNIRASTYTDAVQPVVAHSFLAPLRFLFDKFAVYTSHFDNGGDTLISI 460
            S  +EEA +  E    E +     G+ CFPA ATV+L+DG    M  +++G RV VA G FSPVFMFTHK+  I   FV +    G  L +T  H++Y++  L  A +  +G  ++ + G +S VS V+ V   GLYNPQT++G+I+V+ +RASTYT AV+   AHS L PLR +F    + ++  DNG D L S+
Sbjct:  279 SGLEEEAQISPEGSDDEEEEGEDDGSACFPAHATVELEDGSFKTMDSIELGDRVKVASGEFSPVFMFTHKMAGISYSFVRLTASSGHSLELTKGHYLYVNGDLAAAESVHVGDSIETDAGVVS-VSAVARVVSRGLYNPQTVNGNIVVNGVRASTYTTAVEIKTAHSLLLPLRAVFRLAGMTSAMLDNGSDKLASM 473          
BLAST of Ggra11022.t1 vs. uniprot
Match: A0A2V3IFE6 (Sonic hedgehog protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFE6_9FLOR)

HSP 1 Score: 152 bits (383), Expect = 1.180e-37
Identity = 87/218 (39.91%), Postives = 118/218 (54.13%), Query Frame = 0
Query:  257 LAPQPVGPSTFSAAKE--------------EAVLEEEKEAQLARGSGNKCFPASATVQLDDGQRIPMSQLQIGHRVLVAPGVFSPVFMFTHKLNNIVSDFVHIRTHRGDRLSVTASHFIYLDSKLIPAGNAAIGQQVQLEDGALSTVSQVSVVQHSGLYNPQTLHGDIIVDNIRASTYTDAVQPVVAHSFLAPLRFLFDKFAVYTSHFDNGGDTLISI 460
            +AP      TFSAA++                V +E  EA      G+ CFPA  TV+L+DG    M+Q+ IG RV V   +FS VFMFTH+L +  + FV I T     +S+T  H+++++  L  A    +G  V+L  G  +TV  V  V+ +GLYNPQT+ GDI+V+ IRASTYT  V P  AH  L P R L+  F V TS F+ G   L  +
Sbjct:  192 VAPSEADGETFSAAEDINDGDTVGVPVTVLPGVPKESAEATAEDDDGSTCFPADTTVELEDGSVKEMAQVNIGDRVRVGRSMFSEVFMFTHRLQDGENYFVKIETDSSG-ISLTKGHYLFVNGVLAAAKTVQVGDLVELASGETATVRAVKKVKGTGLYNPQTISGDIVVNGIRASTYTTTVDPAFAHRLLTPFRALYQAFGVATSAFERGAVNLAKL 408          
BLAST of Ggra11022.t1 vs. uniprot
Match: A0A2V3IKL0 (DBH-like monooxygenase protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKL0_9FLOR)

HSP 1 Score: 154 bits (389), Expect = 9.990e-37
Identity = 74/161 (45.96%), Postives = 105/161 (65.22%), Query Frame = 0
Query:  292 CFPASATVQLDDGQRIPMSQLQIGHRVLVAPGVFSPVFMFTHKLNNIVSDFVHIRTHRGDRLSVTASHFIYLDSKLIPAGNAAIGQQVQLEDGALSTVSQVSVVQHSGLYNPQTLHGDIIVDNIRASTYTDAVQPVVAHSFLAPLRFLFDKFAVYTSHFDN 452
            CFPASA+V+L DG R  M +LQIG  +LV PG +S VF+FTH+ + ++  FV + T  G  + +T+ HF+YL+ KL  AG+A  G +V +  G    V++VS V   GL+NPQT+HG+I+VD + +STYT  + P++AH  LAPLR+L     V    F N
Sbjct:  666 CFPASASVELRDGSRKRMDELQIGDSILVGPGEYSEVFLFTHRTSRVLYRFVQLTTSSGATVKLTSGHFLYLNGKLAMAGSAREGDEVTVGSGETEMVTKVSTVVDKGLFNPQTIHGNIVVDGVVSSTYTHTIAPMMAHGLLAPLRWLHKCMGVVGIAFSN 826          
BLAST of Ggra11022.t1 vs. uniprot
Match: R7Q619 (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q619_CHOCR)

HSP 1 Score: 144 bits (364), Expect = 1.190e-36
Identity = 76/169 (44.97%), Postives = 101/169 (59.76%), Query Frame = 0
Query:  292 CFPASATVQLDDGQRIPMSQLQIGHRVLVAPGVFSPVFMFTHKLNNIVSDFVHIRTHRGDRLSVTASHFIYLDSKLIPAGNAAIGQQVQLEDGALSTVSQVSVVQHSGLYNPQTLHGDIIVDNIRASTYTDAVQPVVAHSFLAPLRFLFDKFAVYTSHFDNGGDTLISI 460
            CFPA+A V+L++G    MSQ+Q+G RV V P  FS VFMFTHK   I   FV + T  G  LS+T  H++Y++  +  A     G  + L DG  S+V+QV      GLYNPQT+HGDIIV+ + A+TYT  V+  +AH+ LAPLR ++       S  D G D L  I
Sbjct:   69 CFPANALVELENGATKMMSQVQLGDRVRVGPNDFSDVFMFTHKTAAIKYSFVTLATQSGHTLSLTKGHYLYVNGVVAAAKTVRSGDFITLADGTTSSVTQVGTEIARGLYNPQTVHGDIIVNGLLATTYTTTVERSMAHALLAPLRAVYSSIGWSMSALDAGADRLAGI 237          
BLAST of Ggra11022.t1 vs. uniprot
Match: A0A1X6P3Z4 (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3Z4_PORUM)

HSP 1 Score: 148 bits (374), Expect = 1.210e-36
Identity = 85/193 (44.04%), Postives = 115/193 (59.59%), Query Frame = 0
Query:  272 EEAVLEEEKEAQLARGSGNK---CFPASATVQLDDGQRIPMSQLQIGHRVLVAPGVFSPVFMFTHKLNNIVSDFVHIRTHRGDRLSVTASHFIYLDSKLIPAGNAAIGQQVQLEDGA-LSTVSQVSVVQHSGLYNPQTLHGDIIVDNIRASTYTDAVQPVVAHSFLAPLRFLFDKFAVYTSHFDNGGDTLISI 460
            E  V+E   EA+ +   G+    CFPASA V+LD G+ + M QL +G  V V+   FS VF+FTHK+      FV + T  G  L+VT SH++Y + K+  AG   +G +++L   A    ++  S V  +GLYNPQTLHGDI V+ IRAST+T AV+P VA + LAPLR LF    V TS  D G   L ++
Sbjct:  185 EPDVIEGLSEAEPSPTDGDDDDVCFPASAQVELDTGRTVTMDQLAVGDNVRVSADAFSRVFLFTHKVAAGSFPFVKLTTASGASLTVTRSHYVYANGKMTAAGAVKLGDELELVGAAKCDIITATSPVTETGLYNPQTLHGDIFVNGIRASTFTTAVEPRVASALLAPLRALFRATGVSTSALDAGSARLAAL 377          
The following BLAST results are available for this feature:
BLAST of Ggra11022.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6699.720e-17655.36Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
R7QIA64.240e-4547.93HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3IRZ61.220e-4350.60Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
A0A2V3IX716.700e-4347.62Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
warthog protein 6-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDBBD1.090e-3944.77warthog protein 6-like n=1 Tax=Mercenaria mercenar... [more]
A0A2V3IGP95.310e-3842.35Warthog protein 6 n=1 Tax=Gracilariopsis chorda Ta... [more]
A0A2V3IFE61.180e-3739.91Sonic hedgehog protein n=1 Tax=Gracilariopsis chor... [more]
A0A2V3IKL09.990e-3745.96DBH-like monooxygenase protein 1 n=1 Tax=Gracilari... [more]
R7Q6191.190e-3644.97HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A1X6P3Z41.210e-3644.04HintN domain-containing protein n=1 Tax=Porphyra u... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001657Hedgehog proteinPRINTSPR00632SONICHHOGcoord: 415..438
score: 33.52
coord: 171..188
score: 32.07
coord: 399..413
score: 46.97
IPR003587Hint domain N-terminalSMARTSM00306hint_7coord: 290..383
e-value: 1.6E-8
score: 44.3
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 292..421
e-value: 2.9E-31
score: 110.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..254
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..289
NoneNo IPR availablePANTHERPTHR46706FAMILY NOT NAMEDcoord: 222..447
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..471
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableCDDcd00081Hintcoord: 292..415
e-value: 4.83253E-10
score: 55.7382
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 289..440
e-value: 5.4E-31
score: 107.8
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 292..420

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000894_piloncontigtig00000894_pilon:21212..22627 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11022.t1Ggra11022.t1Gracilaria gracilis GNS1m malemRNAtig00000894_pilon 21212..22627 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra11022.t1 ID=Ggra11022.t1|Name=Ggra11022.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=472bp
MRSVLFACALLPLVLASPFLDARAHRAVGATVRAEEEQPRAADVDGATFV
LVARSKGCVNEIEHGIVAFPPFEAGVSLALNLSPPEALIPFDNITVAGDT
CTRDALHDVLALYDPSKIALTDVGVDADDIPHIYLAGVDAAARICAPFQY
EPRVYLYTSQLQHLFRANQRFGGVQIEVSERTLEPEHNAMYMLSIPRNQT
ENACLYRRRTVSGEGPAMTPSKDEEPESSAEADESDDDEDEEQSASETDD
PEEEPQLAPQPVGPSTFSAAKEEAVLEEEKEAQLARGSGNKCFPASATVQ
LDDGQRIPMSQLQIGHRVLVAPGVFSPVFMFTHKLNNIVSDFVHIRTHRG
DRLSVTASHFIYLDSKLIPAGNAAIGQQVQLEDGALSTVSQVSVVQHSGL
YNPQTLHGDIIVDNIRASTYTDAVQPVVAHSFLAPLRFLFDKFAVYTSHF
DNGGDTLISIFRAPLFYLSSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001657Hedgehog
IPR003587Hint_dom_N
IPR001767Hedgehog_Hint
IPR036844Hint_dom_sf