Ggra10968.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10968.t1
Unique NameGgra10968.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length256
Homology
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BLAST of Ggra10968.t1 vs. uniprot
Match: A0A2V3IMK8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMK8_9FLOR)

HSP 1 Score: 90.1 bits (222), Expect = 1.690e-18
Identity = 50/110 (45.45%), Postives = 73/110 (66.36%), Query Frame = 0 
Query:  145 AAYSYSLPQRSAVNERLPHALHVSDARLMAVQQALSLMVSERATWLLRLSPVDRFGNETVSAP-FMSALLALQTRQHAVAVSCAAGQWLFWPLLFPLYGLCLVGVFVPTA 253
            AA+SY+LPQR+A+   LP  + V+ A L++V  A+ L++S  A W LRLS V    +   +AP + +ALLALQ  Q AV +  + GQW+  PLLFP +GLC + V+VP++
Sbjct:   75 AAFSYALPQRTAIQTALPPRITVTSANLISVSLAVQLVLSPHANWFLRLS-VPPVPSANRAAPRYNAALLALQRAQTAVILPDSTGQWVLCPLLFPPFGLCFIAVYVPSS 183
The following BLAST results are available for this feature:
BLAST of Ggra10968.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IMK81.690e-1845.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..81
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 231..250
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..230
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 251..255
NoneNo IPR availableTMHMMTMhelixcoord: 231..253

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000938_piloncontigtig00000938_pilon:122649..123416 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10968.t1Ggra10968.t1Gracilaria gracilis GNS1m malemRNAtig00000938_pilon 122649..123416 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10968.t1 ID=Ggra10968.t1|Name=Ggra10968.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=256bp
MPLVPHMLQALLPRRHRPAPPPPPATPPLPPPPPPPPSARAPSPLPLPLP
SPLPLPPPPSTRAADVSTPPSAPPALALAPPRAPRLPRASLASVSRLQAL
LAAHPSARLALRRVAVHASRGELYWAGAVSFDARLIGDRSCTQCAAYSYS
LPQRSAVNERLPHALHVSDARLMAVQQALSLMVSERATWLLRLSPVDRFG
NETVSAPFMSALLALQTRQHAVAVSCAAGQWLFWPLLFPLYGLCLVGVFV
PTACA*
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