Ggra10964.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10964.t1
Unique NameGgra10964.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length682
Homology
BLAST of Ggra10964.t1 vs. uniprot
Match: A0A2V3IQ79 (Thylakoid membrane protein TERC, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ79_9FLOR)

HSP 1 Score: 396 bits (1017), Expect = 7.820e-130
Identity = 207/265 (78.11%), Postives = 236/265 (89.06%), Query Frame = 0
Query:   93 HHAHHAHHFAGEPRRLADDVRVTLTFVSLALGVCALFYHNNAESGLEFLTAYIIEYALSVDNLLVFLLIFDYFAVPRAFQSRVLTYGLTGAVAMRGIFIYFGEALTHRFKPVSLVFAAILVFSAIQLLFSSDEEEEDLSNNAVVKFSKSVLPVTDQYNADRFFSSFKGKTVATPLLLVLLVIEISDLIFALDSVPAVLGVSERTAVIYVSNVCAVLGLRSLYFILADSLADLRFLQPALAIVLGFIGAKMSASVFGYQIPVPLSL 357
            HH+HH HHFAGEPRR+ADD+RVTL+ V+LAL V A FYH+ A SG+EFLTAYIIEYALSVDNLLVFLLIFDYFAVPRAFQSRVL++GLTGAV MRG+FI FGEALTHRFKP SL+FAAIL+FSA +L  S +E+EEDLSNNA+VKF+ SVLPV+D Y+ DRFF    G  VATPLLLVLLV+EISDL+FALDSVPAVLGVS+RT+VIYVSNV AVLGLRSLYF+LADS+A+LRFLQPALA VL FIGAKM ASVF +++PV LSL
Sbjct:   56 HHSHHRHHFAGEPRRVADDIRVTLSCVALALAVAAGFYHHEAASGIEFLTAYIIEYALSVDNLLVFLLIFDYFAVPRAFQSRVLSFGLTGAVIMRGVFIIFGEALTHRFKPASLIFAAILLFSAAKLALSDEEDEEDLSNNAIVKFANSVLPVSDAYSGDRFFVRNNGIKVATPLLLVLLVVEISDLVFALDSVPAVLGVSDRTSVIYVSNVLAVLGLRSLYFLLADSIANLRFLQPALAFVLAFIGAKMGASVFQFEVPVTLSL 320          
BLAST of Ggra10964.t1 vs. uniprot
Match: A0A1X6PEJ8 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PEJ8_PORUM)

HSP 1 Score: 256 bits (654), Expect = 1.770e-74
Identity = 142/270 (52.59%), Postives = 197/270 (72.96%), Query Frame = 0
Query:  104 EPRRLADDVRVTLTFVS----LALGVCALFYHNNAESGLEFLTAYIIEYALSVDNLLVFLLIFDYFAVPRAFQSRVLTYGLTGAVAMRGIFIYFGEALTHRFKPVSLVFAAILVFSAIQLLF-SSDEEEEDLSNNAVVKFSKSVLPVTDQYNADRFFSSFKG------KTVATPLLLVLLVIEISDLIFALDSVPAVLGVSERTAVIYVSNVCAVLGLRSLYFILADSLADLRFLQPALAIVLGFIGAKMSASVFGYQIPVPLSLGYLRV 362
            +P  + DD+  TL +V+    +A GV A      AE GLEF+ AY++EY+LSVDNLLVFLL+F +F VPR  Q+RVL +G+ GA+++RG+ I  GEALT RF+ VSLVF  IL+ SA ++L   +  ++ED++NNA V+F++ +LP +D Y+ DRFF+S  G        +ATPL+LVLL +E SD++FALDSVPAVLG+S  T VIY SN+ AVLGLRSL+F++++++ DLRFLQPALA+VL F+G KM A V GY++ +  SLG + V
Sbjct:  161 DPTAVRDDILYTLCWVAAAGVVAAGVAATL---GAERGLEFVAAYVVEYSLSVDNLLVFLLLFQHFHVPRRLQARVLKWGIIGAMSLRGVMIVAGEALTRRFRWVSLVFGGILLVSAAKMLIPGAGGDDEDVANNATVRFARRLLPFSDAYDGDRFFTSGAGGPGGDGPRLATPLMLVLLSVEFSDVVFALDSVPAVLGISSHTFVIYASNIMAVLGLRSLFFVISEAIGDLRFLQPALAVVLAFVGLKMMAGVAGYEVGILPSLGVITV 427          
BLAST of Ggra10964.t1 vs. uniprot
Match: A0A1X6PFB1 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PFB1_PORUM)

HSP 1 Score: 254 bits (648), Expect = 5.330e-70
Identity = 131/225 (58.22%), Postives = 175/225 (77.78%), Query Frame = 0
Query:  135 ESGLEFLTAYIIEYALSVDNLLVFLLIFDYFAVPRAFQSRVLTYGLTGAVAMRGIFIYFGEALTHRFKPVSLVFAAILVFSAIQLLFSSDEEEEDLSNNAVVKFSKSVLPVTDQYNADRFFSS-FKGKTVATPLLLVLLVIEISDLIFALDSVPAVLGVSERTAVIYVSNVCAVLGLRSLYFILADSLADLRFLQPALAIVLGFIGAKMSASVFGYQIPVPLSLG 358
            + GLEF+ AY++EY+LSVDNLLVFL++F +F VPR  Q+RVL +G+ GA+  RGI I  GEALTHRF+ V+++F  +L  SA +L+    EEEED+  N+ V+F++ +LP +D Y+ DRFF++   G  +ATPL+LVLL +E SD++FALDSVPAVLG+S  T VIY SNV A+LGLRSLYF+LAD++ DLRFLQPALA+VLGF+G KM A V GY++ +  SLG
Sbjct:  134 DRGLEFVAAYVVEYSLSVDNLLVFLILFQHFNVPRPLQTRVLKWGIIGAITFRGIMIVAGEALTHRFEWVTVLFGIVLFVSAAKLILPGGEEEEDIEANSTVRFARRLLPFSDAYDGDRFFTTGADGARLATPLMLVLLSVEFSDVVFALDSVPAVLGISSNTFVIYASNVMAILGLRSLYFVLADAIGDLRFLQPALAVVLGFVGGKMVAGVGGYEVGILPSLG 358          
BLAST of Ggra10964.t1 vs. uniprot
Match: A0A5J4YHZ0 (Thylakoid membrane protein TERC, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YHZ0_PORPP)

HSP 1 Score: 242 bits (617), Expect = 7.030e-70
Identity = 136/259 (52.51%), Postives = 193/259 (74.52%), Query Frame = 0
Query:  111 DVRVTLTFVSLALGV-CALFYHNNAESGLEFLTAYIIEYALSVDNLLVFLLIFDYFAVPRAFQSRVLTYGLTGAVAMRGIFIYFGEALTHRFKPVSLVFAAILVFSAIQLLFSSDEEEED-LSNNAVVKFSKSVLPVTDQYNADRFFSSF--KGKT-------VATPLLLVLLVIEISDLIFALDSVPAVLGVSERTAVIYVSNVCAVLGLRSLYFILADSLADLRFLQPALAIVLGFIGAKMSASVFGYQIPVPLSLG 358
            D+   L++V+LA  V   +++    +  +E++TAYI+EY+LSVDNL VFLL+F +F V RA Q +VL++G+ GA AMRGIFI  GE L HRF  VSL+FAA L+FSA ++L +  E+EED LS+N++V F++ +L  +D Y+ D+F+++   +G+T       V TPLLL L+ IEISD++FALDSVPAVLG+S+   VIY+SN+ A+LGLRSL+F++ D++A+LR+LQP L +VLGFIGAK++AS FGY I    SLG
Sbjct:  107 DLVNVLSWVALASAVGVGVYFQYGYDRVVEYVTAYIVEYSLSVDNLFVFLLLFRFFKVERAAQEKVLSWGIFGAAAMRGIFILAGEELEHRFTWVSLLFAAFLLFSAAKILVAGGEDEEDDLSDNSIVSFARKLLNFSDHYDGDKFWTTVPVEGRTGAGALQRVGTPLLLCLISIEISDVVFALDSVPAVLGISDSALVIYMSNLMAILGLRSLFFVVEDAVANLRYLQPCLGVVLGFIGAKLAASTFGYDIDTLQSLG 365          
BLAST of Ggra10964.t1 vs. uniprot
Match: A0A7S0T6N1 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T6N1_9RHOD)

HSP 1 Score: 238 bits (608), Expect = 1.960e-68
Identity = 140/276 (50.72%), Postives = 190/276 (68.84%), Query Frame = 0
Query:   87 SPDSVPHHAHHAHHFAGEPRRLADDVRVTLTFVSLALGVCALFYHN-NAESGLEFLTAYIIEYALSVDNLLVFLLIFDYFAVPRAFQSRVLTYGLTGAVAMRGIFIYFGEALTHRFKPVSLVFAAILVFSAIQLLFSSDEE-EEDLSNNAVVKFSKSVLPVTDQYNADRFFSSF---KGKTVATPLLLVLLVIEISDLIFALDSVPAVLGVSERTAVIYVSNVCAVLGLRSLYFILADSLADLRFLQPALAIVLGFIGAKMSASVFGYQIPVPLSL 357
            S DS  H   HA   +   +R A D++    +V++A  V A  Y    A+   EF+TAY++EY+LSVDNL VFLL+F YF VPR  Q +VL +G+ GA  MR  FI+ GE L  RF  VSL+FA IL+ SA+++  + DEE EEDLS N++V FSKS+L  +D Y+ DRF++       K VATPLLL L+ +E+SD++FALDSVPAVLG+S+   V+Y SN+ A+LGLRSL+F++ D++A+LRFLQP+L  VL F+G K++ S FGY I   LSL
Sbjct:  101 SSDSEQHRKGHAAE-SDLLKREAQDLKNVAGWVAVAAAVGAGVYAKMGADRAYEFVTAYVVEYSLSVDNLFVFLLLFQYFKVPRDAQEKVLQWGVIGAGLMRLAFIFVGEELESRFWWVSLIFAVILIASAVKIFVAGDEEDEEDLSQNSIVNFSKSLLSFSDSYDGDRFWTRDGPEAAKAVATPLLLTLICVELSDVVFALDSVPAVLGISKNLFVVYSSNLLAILGLRSLFFVVEDAVANLRFLQPSLGAVLAFVGLKLAGSSFGYNIDTGLSL 375          
BLAST of Ggra10964.t1 vs. uniprot
Match: A0A7S0ZCP1 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCP1_9RHOD)

HSP 1 Score: 233 bits (593), Expect = 2.280e-68
Identity = 125/221 (56.56%), Postives = 168/221 (76.02%), Query Frame = 0
Query:  147 EYALSVDNLLVFLLIFDYFAVPRAFQSRVLTYGLTGAVAMRGIFIYFGEALTHRFKPVSLVFAAILVFSAIQLLFSS--DEEEEDLSNNAVVKFSKSVLPVTDQYNADRFFSSFK-GKTVATPLLLVLLVIEISDLIFALDSVPAVLGVSERTAVIYVSNVCAVLGLRSLYFILADSLADLRFLQPALAIVLGFIGAKMSASVFGYQIPVPLSLGYLRVLL 364
            EY+LSVDNL VFLL+F YF VPR  Q +VL YG+ GA +MR  FI  GEAL  RF+ VSL+F+ IL+ SA+Q+  S   D+E+EDLS N++V+FSKS+L  +++Y+ D+F+S  + G  VATPLLL L+ +E+SD++FALDSVPAVLG+S+ T VIY SN+ A+LGLRSL+F++ D++A+LRFLQP L  VL F+G K+  SVFGY I   +SLG +  LL
Sbjct:    1 EYSLSVDNLFVFLLLFQYFKVPRKSQEKVLNYGIIGAASMRLAFIVVGEALEKRFEWVSLIFSFILIVSAVQIFVSGGDDDEDEDLSGNSIVQFSKSLLSFSEKYDGDKFWSELENGAKVATPLLLTLICVELSDVVFALDSVPAVLGISDNTFVIYSSNLMAILGLRSLFFVVEDAVANLRFLQPCLGAVLAFVGVKLGVSVFGYTIDTTVSLGIILALL 221          
BLAST of Ggra10964.t1 vs. uniprot
Match: A0A7S3ABX2 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ABX2_9RHOD)

HSP 1 Score: 234 bits (598), Expect = 2.290e-68
Identity = 132/261 (50.57%), Postives = 182/261 (69.73%), Query Frame = 0
Query:  106 RRLADDVRVTLTFVSLALGVCALFY--HNNAESGLEFLTAYIIEYALSVDNLLVFLLIFDYFAVPRAFQSRVLTYGLTGAVAMRGIFIYFGEALTHRFKPVSLVFAAILVFSAIQLLFSSDEEEEDLSNNAVVKFSKSVLPVTDQYNADRFFSSFKGKTVATPLLLVLLVIEISDLIFALDSVPAVLGVSERTAVIYVSNVCAVLGLRSLYFILADSLADLRFLQPALAIVLGFIGAKMSASVFGYQIPVPLSLGYLRVLL 364
            + L+ D+   +  V L L      Y     A+  +E+LT Y++E +LSVDNL VFLLIF+YF VPR  Q  VL +G+ GA+  RG+ I+ G  LT RF+   L FAAIL++SAI+LL    EE EDLS+N ++KF+K V+PV++ Y+  +F+     K V TPLL+VLL IE+SD++FA DSVPAVLG+S+   VIY SNV A++GLRSLYF++AD++  LRFLQP+LA+VLGFI  KM  +V G Q+   LSLG++ ++L
Sbjct:    8 KALSRDLLKVVATVCLGLSFAGGVYLVDGKADRCIEYLTGYVVELSLSVDNLFVFLLIFNYFHVPREAQEPVLFWGILGAMIFRGLMIFIGGKLTERFRLAQLGFAAILLYSAIKLLIEG-EENEDLSDNRIIKFAKRVVPVSETYHGTKFYFKESEKIVWTPLLVVLLSIELSDVVFAFDSVPAVLGISDDIFVIYTSNVFAIIGLRSLYFVIADAIGTLRFLQPSLALVLGFIALKMIFAVVGLQVNTKLSLGFVLLIL 267          
BLAST of Ggra10964.t1 vs. uniprot
Match: A0A835ZA94 (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA94_9STRA)

HSP 1 Score: 230 bits (586), Expect = 7.570e-67
Identity = 122/246 (49.59%), Postives = 177/246 (71.95%), Query Frame = 0
Query:  119 VSLALGVCALFYHNNAESGLEFLTAYIIEYALSVDNLLVFLLIFDYFAVPRAFQSRVLTYGLTGAVAMRGIFIYFGEALTHRFKPVSLVFAAILVFSAIQLLFSSDEEEEDLSNNAVVKFSKSVLPVTDQYNADRFFSSFKGKTVATPLLLVLLVIEISDLIFALDSVPAVLGVSERTAVIYVSNVCAVLGLRSLYFILADSLADLRFLQPALAIVLGFIGAKMSASVFGYQIPVPLSLGYLRVLL 364
            V+  LG  A+      +SGLEF   Y++E +LSVDNL VF+++F+YF VP A+Q RVLT+G+ GAV+MR + I  G A   RF+ V L FAAIL+ S+++LL   ++E+ DLSNN V++ SK  +  TD+Y  ++FF+   GK +ATPLLL L+ IE+SD +FA+DS+PAVLGVS+ T ++Y SNV A+L LRSLY +++ ++ DL +L+P++A+VLGF+G KM A  F Y+I + +SL  + VLL
Sbjct:    6 VAFGLGTMAV---KGRQSGLEFFAGYLVEQSLSVDNLFVFIMLFEYFKVPAAYQGRVLTWGIIGAVSMRAVMIVVGVAAIQRFRGVILAFAAILLASSVKLLTEKEDEDGDLSNNIVLRISKFFVRSTDKYEGEKFFTVVDGKKMATPLLLCLVCIELSDFVFAVDSIPAVLGVSKDTFIVYSSNVFAILALRSLYTLVSHAITDLPYLKPSVALVLGFVGLKMCAEYFHYEIGIGVSLSVVAVLL 248          
BLAST of Ggra10964.t1 vs. uniprot
Match: A0A7S2RH37 (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RH37_9STRA)

HSP 1 Score: 229 bits (585), Expect = 5.050e-66
Identity = 127/259 (49.03%), Postives = 180/259 (69.50%), Query Frame = 0
Query:  107 RLADDVRVTLTFVSLALGVCALFYH-NNAESGLEFLTAYIIEYALSVDNLLVFLLIFDYFAVPRAFQSRVLTYGLTGAVAMRGIFIYFGEALTHRFKPVSLVFAAILVFSAIQLLFSSDEEEEDLSNNAVVKFSKSVLPVTDQYNADRFFSSFKGKTVATPLLLVLLVIEISDLIFALDSVPAVLGVSERTAVIYVSNVCAVLGLRSLYFILADSLADLRFLQPALAIVLGFIGAKMSASVFGYQIPVPLSLGYLRVLL 364
            R    V  T+  V+LA+   A  +H    +SG EF   Y++E +LSVDNL VFL++F+YF VP ++Q RVLT+G+ GAV MRGI I  G A   +F+ V L+FAAIL+ SA++L F SDE E DLSNN V++ SK  +   ++Y+ D+FF+   G+  ATPLLL L+ IE+SD +FA+DS+PAV+GVS+   ++Y SN+ A++GLRSLY ++A ++ DL +L+PA+A+VL FIG KM    F Y+I + LSLG +  LL
Sbjct:   12 RFRQSVLSTVGCVALAVVFGAGVWHFRGRQSGFEFFAGYLVEQSLSVDNLFVFLMLFNYFQVPLSYQGRVLTWGIIGAVVMRGIMIVAGVAAVQKFRMVILLFAAILMLSAVKLFFESDEPE-DLSNNTVMRLSKFAVGAVEEYDGDKFFTILDGQRRATPLLLCLVCIELSDFVFAVDSIPAVIGVSQDLLIVYSSNIFAIMGLRSLYTLVAKAVQDLPYLRPAVALVLAFIGLKMVMEFFHYEISISLSLGVVVTLL 269          
BLAST of Ggra10964.t1 vs. uniprot
Match: A0A7S3Z2F4 (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z2F4_9EUKA)

HSP 1 Score: 228 bits (581), Expect = 6.460e-66
Identity = 116/233 (49.79%), Postives = 172/233 (73.82%), Query Frame = 0
Query:  120 SLALGVCALFYHNNAESGLEFLTAYIIEYALSVDNLLVFLLIFDYFAVPRAFQSRVLTYGLTGAVAMRGIFIYFGEALTHRFKPVSLVFAAILVFSAIQLLFSSDEEEEDLSNNAVVKFSKSVLPVTDQYNADRFFSSFK-GKTVATPLLLVLLVIEISDLIFALDSVPAVLGVSERTAVIYVSNVCAVLGLRSLYFILADSLADLRFLQPALAIVLGFIGAKMSASVFGYQI 351
            +LA G+  L+      +GLEF + Y++E +LSVDNL VFLL+FDYF VP   Q RVL +G  GA+A RG+FI  G      FKPV+LVFA IL++S++QLL  +D+++E+L +NA+VKF+  ++  +D+Y+ D+FF+    G+ VATPL L L+ IEISD++FA+DSVPAV GV++   +++ SN+ A+LGLRSLY +L+ ++ DL++LQPA+A++LGF+GAK+ A  FG  +
Sbjct:   26 ALAFGLF-LYIARGQTAGLEFFSGYLVEESLSVDNLFVFLLLFDYFQVPLGSQKRVLQWGFLGALASRGLFIGLGSVALQNFKPVTLVFAGILLYSSLQLLLENDDDDENLEDNAIVKFAAQLIETSDKYDGDKFFTKLDDGRKVATPLFLALVCIEISDVLFAVDSVPAVFGVTKDPLIVFTSNMFAILGLRSLYTVLSTAVQDLKYLQPAVALILGFVGAKLVAEYFGMDV 257          
The following BLAST results are available for this feature:
BLAST of Ggra10964.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQ797.820e-13078.11Thylakoid membrane protein TERC, chloroplastic n=1... [more]
A0A1X6PEJ81.770e-7452.59Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6PFB15.330e-7058.22Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YHZ07.030e-7052.51Thylakoid membrane protein TERC, chloroplastic n=1... [more]
A0A7S0T6N11.960e-6850.72Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A7S0ZCP12.280e-6856.56Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S3ABX22.290e-6850.57Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A835ZA947.570e-6749.59Integral membrane protein TerC family-domain-conta... [more]
A0A7S2RH375.050e-6649.03Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3Z2F46.460e-6649.79Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 433..453
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..102
NoneNo IPR availablePANTHERPTHR30238MEMBRANE BOUND PREDICTED REDOX MODULATORcoord: 106..372
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 284..297
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 263..283
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 298..318
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 167..174
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 352..356
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 132..142
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..194
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 319..329
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 143..166
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 375..681
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 357..374
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 200..221
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 195..199
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 330..351
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..113
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 222..262
NoneNo IPR availableTMHMMTMhelixcoord: 140..162
NoneNo IPR availableTMHMMTMhelixcoord: 331..353
NoneNo IPR availableTMHMMTMhelixcoord: 204..223
NoneNo IPR availableTMHMMTMhelixcoord: 296..318
NoneNo IPR availableTMHMMTMhelixcoord: 175..194
NoneNo IPR availableTMHMMTMhelixcoord: 112..130
NoneNo IPR availableTMHMMTMhelixcoord: 262..281
IPR016169FAD-binding, type PCMH, subdomain 2GENE3D3.30.465.10coord: 480..600
e-value: 2.5E-12
score: 48.3
IPR022369Integral membrane protein TerC, riboswitch-linkedTIGRFAMTIGR03718TIGR03718coord: 112..371
e-value: 2.4E-84
score: 281.3
IPR022369Integral membrane protein TerC, riboswitch-linkedPANTHERPTHR30238:SF0THYLAKOID MEMBRANE PROTEIN TERC, CHLOROPLASTICcoord: 106..372
IPR005496Integral membrane protein TerCPFAMPF03741TerCcoord: 142..343
e-value: 1.2E-42
score: 145.6
IPR006094FAD linked oxidase, N-terminalPFAMPF01565FAD_binding_4coord: 427..551
e-value: 3.4E-8
score: 33.3
IPR016166FAD-binding domain, PCMH-typePROSITEPS51387FAD_PCMHcoord: 420..585
score: 9.038122
IPR036318FAD-binding, type PCMH-like superfamilySUPERFAMILY56176FAD-binding/transporter-associated domain-likecoord: 424..582

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000938_piloncontigtig00000938_pilon:112127..115962 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10964.t1Ggra10964.t1Gracilaria gracilis GNS1m malemRNAtig00000938_pilon 112127..115962 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10964.t1 ID=Ggra10964.t1|Name=Ggra10964.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=682bp
MNRAAFVARARSRPRVPATSPVVAKLDPSPASSEPTPASPPSAREEGAAL
SASPPASQLDSVPPAAEPASVSAPPEREQVPTLSARSPDSVPHHAHHAHH
FAGEPRRLADDVRVTLTFVSLALGVCALFYHNNAESGLEFLTAYIIEYAL
SVDNLLVFLLIFDYFAVPRAFQSRVLTYGLTGAVAMRGIFIYFGEALTHR
FKPVSLVFAAILVFSAIQLLFSSDEEEEDLSNNAVVKFSKSVLPVTDQYN
ADRFFSSFKGKTVATPLLLVLLVIEISDLIFALDSVPAVLGVSERTAVIY
VSNVCAVLGLRSLYFILADSLADLRFLQPALAIVLGFIGAKMSASVFGYQ
IPVPLSLGYLRVLLLLVTAHSTNMDSRIVLSTLSPTVATFMSLLEDPYRE
STPADVFNSLKSQFLQPVLPQVSTHRLLRASDLQQLQRAILIARSQRRRL
KAVTNASCTRAQAALASGAYVLDVSGLCRHSQSRNVLTAQCGTPLSHIFA
AYEMATQAPLGRVRSVGGAVATGVLGGCATDSLLADSCVQISVIDSLGRL
RVYSASQGGPMFNAIRLSLGAFGVIYDASFSVDKLRRYVKVRTSFHLQRS
LFARGAAALQRRLRDAVGVEVVWWPFNSYKPRKRWRAEEDVVWLRVLKQA
HRPKSEQLDCQQHHNGVNSTTTLIVIDYVAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016169FAD-bd_PCMH_sub2
IPR022369Integral_membrane_TerC_rswitch
IPR005496Integral_membrane_TerC
IPR006094Oxid_FAD_bind_N
IPR016166FAD-bd_PCMH
IPR036318FAD-bd_PCMH-like_sf