Ggra10963.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10963.t1
Unique NameGgra10963.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length219
Homology
BLAST of Ggra10963.t1 vs. uniprot
Match: A0A2V3IMJ1 (NAD(P)H-hydrate epimerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMJ1_9FLOR)

HSP 1 Score: 240 bits (612), Expect = 6.010e-77
Identity = 130/222 (58.56%), Postives = 154/222 (69.37%), Query Frame = 0
Query:    1 MSEQYGHSLEQLMELAGLSVAHAVAESVRDK-QSA---IVVACGPGNNGGDGLVAARHLFHFGYHNIVVWLPKASTRQPFVSLQTQLHALQIAVK-VGEYGALGEADVIVDAIFGFSFDGAHGVREPYGAAIAQINDAAQAQRISVDVPSGWHVERGDVWGDAAIATPHVLVSLSAPKPCARLLEQRGGAHFIGGRFLPPALCDELRLRAVHYDGTRCVTRV 217
            M + Y  SLEQLMELAGLSVAHA A+ +R + Q A   +VVACGPGNNGGDGLVAARHL H G+H  + W P  +    F +L TQ  AL+I V    E  AL   DV++DAIFGFSFDGA GVR+PY   I  IND+A A  I VDVPSGWHVERGDV  + AI     LVSL+APK CAR  EQRGGAH++GGRF+PP+LC+ L    V Y+  R +TR+
Sbjct:   16 MGDHYAFSLEQLMELAGLSVAHAAADYIRQQWQHAPPRVVVACGPGNNGGDGLVAARHLHHLGFHTCI-WYPSGARSALFTALLTQARALRIGVHHTAEQVALRRCDVVLDAIFGFSFDGAAGVRQPYRRMIESINDSA-APVICVDVPSGWHVERGDVH-EVAIRNARALVSLTAPKLCARRFEQRGGAHYVGGRFVPPSLCEALDFDVVRYERERVITRI 234          
BLAST of Ggra10963.t1 vs. uniprot
Match: R7Q2X0 (NAD(P)H-hydrate epimerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2X0_CHOCR)

HSP 1 Score: 192 bits (487), Expect = 2.300e-57
Identity = 109/217 (50.23%), Postives = 138/217 (63.59%), Query Frame = 0
Query:    1 MSEQYGHSLEQLMELAGLSVAHAVAESVRDKQSAIVVACGPGNNGGDGLVAARHLFHFGYHNIVVWLPKASTRQPFVSLQTQLHALQIAVKVGEYGALGEADVIVDAIFGFSFDGAHGVREPYGAAIAQINDAAQAQRISVDVPSGWHVERGDVWGDAAIATPHVLVSLSAPKPCARLLEQRGGAHFIGGRFLPPALCDELRLRAVHYDGTRCVTRV 217
            MS  Y  +L+QLMELAG SV+HA+  +     + + + CGPGNNGGDGLVAARHL HFGY  + V  PK + R PF +L  QL  L + V  G    L  ADV+VDA+FGF F  A GVREP+G  +A +N+A +   ++VDVPSGW V+ G    + A+ TP VLVSL+APK CAR L   G  H++GGRF+P  LC+EL      Y G   V RV
Sbjct:   76 MSPPYSFTLDQLMELAGQSVSHAIFHT-HPPPARVTLVCGPGNNGGDGLVAARHLHHFGYA-VTVHYPKRAARPPFEALVQQLGVLDVPVDSGL--PLAAADVVVDAVFGFGFRVAGGVREPFGRFLAAMNEA-EGVLLAVDVPSGWEVDGGGK-AEGAVRTPDVLVSLTAPKLCARGLH--GVQHWVGGRFVPRRLCEELAFEVPEYPGIEGVVRV 284          
BLAST of Ggra10963.t1 vs. uniprot
Match: A0A0G4FM11 (NAD(P)H-hydrate epimerase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FM11_VITBC)

HSP 1 Score: 180 bits (456), Expect = 3.070e-53
Identity = 109/218 (50.00%), Postives = 138/218 (63.30%), Query Frame = 0
Query:    6 GHSLEQLMELAGLSVAHAVAESVRDKQSAIVVACGPGNNGGDGLVAARHLFHFGYHNIVVWLPKASTRQPFVSLQTQLHALQIAVKVGEYGALGEADVIVDAIFGFSFDGAHGVREPYGAAIAQIN----DAAQAQR---ISVDVPSGWHVERGDVW-GDAAIATPHVLVSLSAPKPCARLLEQRGGAHFIGGRFLPPALCDELRLRAVHYDG-TRCV 214
            G  LEQLMELAGLSVA AV +  +     IVV CGPGNNGGDGLVAARHLFHFG H++ V  PK   ++ + SL TQL    I V+     +L  ADVI+DA+FGFSF GA  VR PY A + ++      + Q ++   ++VD PSGW VE+G    GDA I  P VLVSL+APK CA   E   G H++GGRF+P ++  + RL    Y G ++CV
Sbjct:   24 GFCLEQLMELAGLSVAQAVQDLSQQSSMQIVVLCGPGNNGGDGLVAARHLFHFG-HDVTVVYPKVGKKEWYSSLVTQLKESNIPVEESLPSSLASADVIIDALFGFSFSGA--VRPPYDAILGELRRIQTSSGQPKKPTIVAVDAPSGWDVEKGPQGNGDAVI--PDVLVSLTAPKKCA---EHFYGRHYLGGRFVPSSIQRKYRLELPAYPGASQCV 233          
BLAST of Ggra10963.t1 vs. uniprot
Match: M2WQ27 (NAD(P)H-hydrate epimerase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WQ27_GALSU)

HSP 1 Score: 180 bits (457), Expect = 7.980e-53
Identity = 106/226 (46.90%), Postives = 139/226 (61.50%), Query Frame = 0
Query:    1 MSEQYGHSLEQLMELAGLSVAHAVAESV---RDKQSAIVVACGPGNNGGDGLVAARHLFHFGYHNIVVWLPKASTRQPFVSLQTQLHALQIAVKVGEYGALGEADVIVDAIFGFSF------DGAHGVREPYGAAIAQINDAAQAQRISVDVPSGWHVERGDVWGDAAIATPHVLVSLSAPKPCARLLEQRGGAHFIGGRFLPPALCDELRLRAVHYDGTRCVTRV 217
            M  +Y  ++EQLMELAGL+VA AVAE        +S I+  CGPGNNGGDGLVAARHLFHFGY   +++ PK + +  F SL  QL AL I + +  +    + DVI+DAIFGFSF           +R P+   I  I  A+ AQ++SVD+PSGW V  GD++    I  P +LVSL+APK CA       G H++GGRF+PP L  EL   A  ++GT+ V R+
Sbjct:   69 MGPEYSFAVEQLMELAGLAVALAVAEQYPLSSSGRSHILCVCGPGNNGGDGLVAARHLFHFGYQVSILY-PKRTEKSLFGSLVKQLEALDIPI-LSAWEQAKKPDVIIDAIFGFSFRVDPSKSSKEAIRPPFFDIIQSIK-ASNAQKVSVDIPSGWDVNEGDIYHVGFI--PDMLVSLTAPKQCALSFS---GMHYVGGRFIPPKLAQELGFVAPQFEGTKLVKRI 286          
BLAST of Ggra10963.t1 vs. uniprot
Match: A0A2A9MHP4 (NAD(P)H-hydrate epimerase n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9MHP4_9APIC)

HSP 1 Score: 176 bits (445), Expect = 2.110e-51
Identity = 99/222 (44.59%), Postives = 139/222 (62.61%), Query Frame = 0
Query:    1 MSEQYGHSLEQLMELAGLSVAHAVAESVR-----DKQSAIVVACGPGNNGGDGLVAARHLFHFGYHNIVVWLPKASTRQPFVSLQTQLHALQIAVKVGEYGALGEADVIVDAIFGFSFDGAHGVREPYGAAIAQINDAAQAQRISVDVPSGWHVERGDVWGDAAIATPHVLVSLSAPKPCARLLEQRGGAHFIGGRFLPPALCDELRLRAVHYDGTRCVTRV 217
            M  + G+S++QLMELAGLSVA AV  +V       + + ++V CGPGNNGGDGLVAARHL  FGY  + VW P+ +++  F SL  QLH  ++ V       L E +++VD IFGFSF GA  +R P+ + +  +  AA    +SVD+PSGW VE+G+V GD     P  L+SL+APK CA+     GG HF+GGRF+P ++ ++  L    Y G + + R+
Sbjct:   43 MGPEVGYSVDQLMELAGLSVAQAVVAAVPLTAAVKRLTRVLVVCGPGNNGGDGLVAARHLKLFGYQ-VCVWYPRPTSKALFESLVKQLHNHRVQVTQEAPADLAEFELVVDCIFGFSFRGA--LRPPFDSVLRTLK-AANIPVLSVDIPSGWDVEQGNVTGDGL--EPQYLISLTAPKLCAKYF---GGVHFVGGRFVPASMIEKYNLVLPEYPGIQEIVRI 255          
BLAST of Ggra10963.t1 vs. uniprot
Match: A0A5J4Z7J3 (NAD(P)H-hydrate epimerase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7J3_PORPP)

HSP 1 Score: 173 bits (439), Expect = 1.840e-50
Identity = 110/232 (47.41%), Postives = 134/232 (57.76%), Query Frame = 0
Query:    1 MSEQYGHSLEQLMELAGLSVA-----HAVA---ESVRDKQSAIVVACGPGNNGGDGLVAARHLFHFGYHNIVVWLPKASTRQPFVSLQTQLHALQIAV------KVGEYGALGEADVIVDAIFGFSF--DGAHGVREPYGAAIAQINDAAQAQRISVDVPSGWHVERGDVWGDAAIATPHVLVSLSAPKPCARLLEQRGGAHFIGGRFLPPALCDELRLRAVHYDGTRCVTR 216
            M E YG +LEQLMELAGL+VA     H VA    SV  ++  +VV CGPGNNGGDGLVAARHL HFG    VV+ PK      +  L  QL+AL + V          + AL  + V+VDA+FGFSF   G   VREP+   I ++ND  +   + VD+PSGWHVE+G   G  AI  P  LVSL+APK   R      G H++GGRF+PP L     LR  HY     VTR
Sbjct:   27 MGEAYGFTLEQLMELAGLAVAQATYAHYVAPGQNSVPGEKVNVVVCCGPGNNGGDGLVAARHLHHFGVPVSVVY-PKPGKHVHYARLVKQLNALDVPVLSKLDAPSNSHDALARSTVLVDAVFGFSFTPSGPENVREPFKTLIERMNDYDKI--LCVDIPSGWHVEQGLQPGTLAIQKPDALVSLTAPKLGVRNFS---GHHYVGGRFVPPRLAQHTGLRVCHYAVADQVTR 252          
BLAST of Ggra10963.t1 vs. uniprot
Match: A0A1Z5JKG2 (NAD(P)H-hydrate epimerase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKG2_FISSO)

HSP 1 Score: 173 bits (439), Expect = 2.000e-50
Identity = 112/228 (49.12%), Postives = 140/228 (61.40%), Query Frame = 0
Query:    1 MSEQYGHSLEQLMELAGLSVAHAVAESVRDKQSA------IVVACGPGNNGGDGLVAARHLFHFGYHNIVVWLPKASTRQPFVSLQTQLHALQIAVKVGEYGAL----GEADVIVDAIFGFSFDGAHGVREPYGAAIAQINDAAQ-AQRISVDVPSGWHVERGDVWGDAAIATPHVLVSLSAPKPCARLLEQRGGAHFIGGRFLPPALCDELRLRAVHYDGTRCVTRV 217
            MSE  G +LEQLMELAGL+VA AV   V +++ +      I+V CGPGNNGGDGLVAARHL  FGY  +VV+ PK S++Q FV+LQ Q   + IAV  G         GE   IVD+IFGFSF G    R P+   + Q+  A   A  +SVDVPSGW V+ GDV G     +P VL+SL+APK CA   E   G HF+GGRF+PP L ++ + R   Y GT  V  +
Sbjct:   40 MSEP-GFTLEQLMELAGLAVAEAVYTVVEERRPSQQVKPKILVICGPGNNGGDGLVAARHLILFGYECVVVY-PKRSSKQHFVNLQKQCEDMGIAVLNGMPDDFEDRSGEYAAIVDSIFGFSFHGEP--RAPFDDILLQLKKAQDCALVVSVDVPSGWDVDEGDVAGFGF--SPQVLISLTAPKGCAMSFE---GRHFVGGRFVPPYLEEKYQFRMPRYPGTSQVVEL 258          
BLAST of Ggra10963.t1 vs. uniprot
Match: A0A8H7PIW9 (NAD(P)H-hydrate epimerase n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PIW9_MORIS)

HSP 1 Score: 171 bits (434), Expect = 3.420e-50
Identity = 101/216 (46.76%), Postives = 137/216 (63.43%), Query Frame = 0
Query:    1 MSEQYGHSLEQLMELAGLSVAHAVAESV-RDKQSAIVVACGPGNNGGDGLVAARHLFHFGYHNIVVWLPKASTRQPFVSLQTQLHALQIAVKVGEYGALGEADVIVDAIFGFSFDGAHGVREPYGAAIAQINDAAQAQRISVDVPSGWHVERGDVWGDAAIATPHVLVSLSAPKPCARLLEQRGGAHFIGGRFLPPALCDELRLRAVHY-DGTRCV 214
            MS   G S++QLMELAGLSVA AV ++  R K   ++V CGPGNNGGDGLVAARHLFHFGY   + + PK S +  +  L TQ + L I     +     + DVI+D++FGFSF G   VREP+   ++ +  + +   ++VD+PSGW VE+G+V  D    TP  LVSL+APK CA+  +   G HFIGGRF+PP+L  +  L+   Y +G + V
Sbjct:   15 MSAAGGFSVDQLMELAGLSVAQAVQKTYPRQKYPRVLVCCGPGNNGGDGLVAARHLFHFGYKPSIFY-PKQSGKDLYKRLVTQCNNLDIPFV--DQANTEQTDVILDSLFGFSFSG--DVREPFKVVVSNLK-STKVPIVAVDIPSGWDVEKGNV--DNQFFTPDTLVSLTAPKLCAQTFK---GRHFIGGRFVPPSLAKKFELQIPEYPEGDQVV 219          
BLAST of Ggra10963.t1 vs. uniprot
Match: A0A7I8K5U5 (NAD(P)H-hydrate epimerase n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K5U5_SPIIN)

HSP 1 Score: 177 bits (448), Expect = 1.210e-49
Identity = 105/224 (46.88%), Postives = 143/224 (63.84%), Query Frame = 0
Query:    6 GHSLEQLMELAGLSVAHAVAESVRDKQ-SAIVVACGPGNNGGDGLVAARHLFHFGYHNIVVWLPKASTRQPFVSLQTQLHALQI---AVKVGEYGALGEADVIVDAIFGFSFDGAHGVREPYGAAIAQI----NDAAQAQR----ISVDVPSGWHVERGDVWGDAAIATPHVLVSLSAPKPCARLLEQRGGAHFIGGRFLPPALCDELRLRAVHYDGTRCVTRV 217
            G S++QLMELAGLSVA A+AE  +  + S I+V CGPGNNGGDGLVAARHL+HFGY  +V + PK + +  +  L TQL AL +   +V+        + DVIVDAIFGFSF G    R P+   + ++    N ++ A++    +SVD+PSGWHVE GD+  +  I  PH+LVSL+APK CA+  +  G  HF+GGRF+PP + ++  L    Y GT    R+
Sbjct:   24 GFSVDQLMELAGLSVASAIAEVYKSNEYSRILVICGPGNNGGDGLVAARHLYHFGYEPVVCY-PKRTPKTLYTGLVTQLGALSVPFLSVEELPQDFSTDFDVIVDAIFGFSFQGKP--RPPFDDLVHRLISLNNLSSTAEKSPAIVSVDIPSGWHVEEGDLDSEGGIK-PHMLVSLTAPKLCAK--KFTGPHHFLGGRFVPPPIANKYGLHLPPYPGTSMCVRI 241          
BLAST of Ggra10963.t1 vs. uniprot
Match: A0A0L0S4L2 (NAD(P)H-hydrate epimerase n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0S4L2_ALLM3)

HSP 1 Score: 170 bits (431), Expect = 2.020e-49
Identity = 107/233 (45.92%), Postives = 135/233 (57.94%), Query Frame = 0
Query:    1 MSEQYGHSLEQLMELAGLSVAHAV-----------AESVRDKQSAIVVACGPGNNGGDGLVAARHLFHFGYHNIVVWLPKASTRQPFVSLQTQLHALQIAVKVGEYG-----ALGEADVIVDAIFGFSFDGAHGVREPYGAAIAQINDAAQAQRISVDVPSGWHVERGDVWGDAAIATPHVLVSLSAPKPCARLLEQRGGAHFIGGRFLPPALCDELRLRAVHYDGTRCVTRV 217
            MS Q G S++QLMELAGLSVA AV           A     K + ++V CGPGNNGGDGLVAARHL HFGY  +V + PK S +  F  L TQL  L I             AL  +D+I+DA+FGFSF G   VR P+   I +IND+ +   +SVDVPSGW VE+G + G   I +P VLVSL+ PK      E   G HF+GGRF+PP L  +  L    Y+ +  + R+
Sbjct:   21 MSAQGGFSIDQLMELAGLSVAQAVERAFPLGGAPTAPGELPKNARVLVCCGPGNNGGDGLVAARHLRHFGYAPMVFY-PKKSKKPLFTGLMTQLINLDIPFVNEPLAPVLDDALQSSDLIIDALFGFSFSG--DVRAPFDQVIQKINDSKRPI-VSVDVPSGWDVEQGPIEGKLKIESPAVLVSLTTPKLGCLKFE---GTHFVGGRFVPPTLAAKFGLTLPVYERSNQIARL 246          
The following BLAST results are available for this feature:
BLAST of Ggra10963.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMJ16.010e-7758.56NAD(P)H-hydrate epimerase n=1 Tax=Gracilariopsis c... [more]
R7Q2X02.300e-5750.23NAD(P)H-hydrate epimerase n=1 Tax=Chondrus crispus... [more]
A0A0G4FM113.070e-5350.00NAD(P)H-hydrate epimerase n=2 Tax=Vitrella brassic... [more]
M2WQ277.980e-5346.90NAD(P)H-hydrate epimerase n=1 Tax=Galdieria sulphu... [more]
A0A2A9MHP42.110e-5144.59NAD(P)H-hydrate epimerase n=1 Tax=Besnoitia besnoi... [more]
A0A5J4Z7J31.840e-5047.41NAD(P)H-hydrate epimerase n=1 Tax=Porphyridium pur... [more]
A0A1Z5JKG22.000e-5049.12NAD(P)H-hydrate epimerase n=1 Tax=Fistulifera sola... [more]
A0A8H7PIW93.420e-5046.76NAD(P)H-hydrate epimerase n=1 Tax=Mortierella isab... [more]
A0A7I8K5U51.210e-4946.88NAD(P)H-hydrate epimerase n=2 Tax=Spirodela interm... [more]
A0A0L0S4L22.020e-4945.92NAD(P)H-hydrate epimerase n=1 Tax=Allomyces macrog... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004443YjeF N-terminal domainPFAMPF03853YjeF_Ncoord: 10..175
e-value: 2.2E-34
score: 118.8
IPR004443YjeF N-terminal domainTIGRFAMTIGR00197TIGR00197coord: 3..194
e-value: 2.3E-40
score: 136.4
IPR004443YjeF N-terminal domainPROSITEPS51385YJEF_Ncoord: 1..199
score: 46.545181
IPR036652YjeF N-terminal domain superfamilyGENE3D3.40.50.10260coord: 1..217
e-value: 9.2E-60
score: 203.8
IPR036652YjeF N-terminal domain superfamilySUPERFAMILY64153YjeF N-terminal domain-likecoord: 2..214
NoneNo IPR availablePANTHERPTHR13232:SF13NAD(P)H-HYDRATE EPIMERASEcoord: 6..217
IPR032976YjeF N-terminal domain-containing protein NAXE-likePANTHERPTHR13232NAD(P)H-HYDRATE EPIMERASEcoord: 6..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000938_piloncontigtig00000938_pilon:111289..111945 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10963.t1Ggra10963.t1Gracilaria gracilis GNS1m malemRNAtig00000938_pilon 111289..111945 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10963.t1 ID=Ggra10963.t1|Name=Ggra10963.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=219bp
MSEQYGHSLEQLMELAGLSVAHAVAESVRDKQSAIVVACGPGNNGGDGLV
AARHLFHFGYHNIVVWLPKASTRQPFVSLQTQLHALQIAVKVGEYGALGE
ADVIVDAIFGFSFDGAHGVREPYGAAIAQINDAAQAQRISVDVPSGWHVE
RGDVWGDAAIATPHVLVSLSAPKPCARLLEQRGGAHFIGGRFLPPALCDE
LRLRAVHYDGTRCVTRVT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004443YjeF_N_dom
IPR036652YjeF_N_dom_sf
IPR032976YJEFN_prot_NAXE-like