Ggra10903.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10903.t1
Unique NameGgra10903.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length391
Homology
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BLAST of Ggra10903.t1 vs. uniprot
Match: A0A5J4YPC4 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YPC4_PORPP)

HSP 1 Score: 145 bits (366), Expect = 2.120e-35
Identity = 82/246 (33.33%), Postives = 124/246 (50.41%), Query Frame = 0 
Query:  117 SIFALYCTQSGRSNDPVKDLKRFARNEAINNKVQHIDDLSVSGLKLYAQATCVKGPTVTEVREALRAQLYEIPSAARDRIVASAVIRGIDAVGTGQDTSSDIEDSGTAFSYLAYWNTKYNGGEVLLSDRYSTCAMVAGVNVKAGEDIAGYETSTSKVKIGTKPCKCSMLWCVGRCDEYDTVTARKPIFKRNRLSLKQQGELHKWMVKQAVDHAESLVVTRNALSEKWNALFRGDDDAPALTWKAPN 362
            ++  L   Q   S  P+++L+ +   +  +  V+ I  L V    +YAQ+ CV+G     +R  LRA L  IP +A++ I+  AV+    +  + QDT   I+  G A S++ +W+T+Y G   L +  Y  C M AG  +   ED+AG+E S  ++ +G +PC    LWC  RC        R PIFKR++L+L  Q ELH +M   A   A +LV T+  L             +PA  WK PN
Sbjct:  224 AVIGLLWWQHKASEIPLRNLRSYVNTDLASKPVKKIGSLLVDEFDIYAQSVCVEGKDADALRRGLRANL-RIPESAKEEIIKRAVVDKASSTSSLQDTKVSIDKQGYAHSFMVFWSTQYVGSSPLFASAYYACVMTAGAMLNIAEDVAGFEESKEEIVLGHEPCHRGYLWCA-RCPIKHERITRTPIFKRSKLTLDAQVELHNFMEASAFKSALALVGTQGYLQASLEKEKPSSWGSPAAPWKRPN 467
The following BLAST results are available for this feature:
BLAST of Ggra10903.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A5J4YPC42.120e-3533.33Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 370..390
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 358..390
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..101
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 102..122
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 123..390
NoneNo IPR availableTMHMMTMhelixcoord: 102..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000098_piloncontigtig00000098_pilon:92813..93985 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10903.t1Ggra10903.t1Gracilaria gracilis GNS1m malemRNAtig00000098_pilon 92813..93985 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10903.t1 ID=Ggra10903.t1|Name=Ggra10903.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=391bp
MARVRATSTALDAESSSERRDLPPIAGSLYEASSHPVPMQKPSPPQPMAF
PHSYATANCSSAPRTHSGHLHAVPTPMPVVYQTPASGGTAAAADFGASAV
RLLVRVTMLMMVVLPVSIFALYCTQSGRSNDPVKDLKRFARNEAINNKVQ
HIDDLSVSGLKLYAQATCVKGPTVTEVREALRAQLYEIPSAARDRIVASA
VIRGIDAVGTGQDTSSDIEDSGTAFSYLAYWNTKYNGGEVLLSDRYSTCA
MVAGVNVKAGEDIAGYETSTSKVKIGTKPCKCSMLWCVGRCDEYDTVTAR
KPIFKRNRLSLKQQGELHKWMVKQAVDHAESLVVTRNALSEKWNALFRGD
DDAPALTWKAPNADYSGDDSAGRNSERARNSDSEYAKQEL*
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