Ggra10883.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10883.t1
Unique NameGgra10883.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length213
Homology
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BLAST of Ggra10883.t1 vs. uniprot
Match: R7QH41 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QH41_CHOCR)

HSP 1 Score: 64.3 bits (155), Expect = 1.070e-8
Identity = 55/109 (50.46%), Postives = 62/109 (56.88%), Query Frame = 0 
Query:   58 ATPRPKRGRRKKRPDLTDEERKALRALQNRAATRRSRERSRLRAAELKNQLQRSLQHNQVLQRERDTLLYCMKQVRVKNSVPRAPP------KRPNPMSLSVILNKHDQ 160
            ATPRPKRGRRKKRPDLT+ +RKALRA QNR A          RA  LK QL  SL+ N +L  ER  LL       VK +   A        +R NPMSL  ILN HD+
Sbjct:  154 ATPRPKRGRRKKRPDLTESQRKALRAQQNRQAXXXXXXXXXXRAEMLKAQLIHSLRLNSLLVAERRKLL----NADVKGNTMEAKGGNKEEGERKNPMSLETILN-HDE 257
The following BLAST results are available for this feature:
BLAST of Ggra10883.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QH411.070e-850.46Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 101..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..46
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 76..125
score: 8.657004

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000125_piloncontigtig00000125_pilon:313952..314590 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10883.t1Ggra10883.t1Gracilaria gracilis GNS1m malemRNAtig00000125_pilon 313952..314590 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10883.t1 ID=Ggra10883.t1|Name=Ggra10883.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=213bp
MTLTTATSHPISTAVAPTSLTASNGVLSQSALLSSSPVSQHALPSGLGAP
STPASAIATPRPKRGRRKKRPDLTDEERKALRALQNRAATRRSRERSRLR
AAELKNQLQRSLQHNQVLQRERDTLLYCMKQVRVKNSVPRAPPKRPNPMS
LSVILNKHDQPIPDRHSYVATPPSKMSLNVAATHASPLSVTSAAYTPAVN
PAFRKAYYSRTP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP