Ggra10869.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10869.t1
Unique NameGgra10869.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length466
Homology
BLAST of Ggra10869.t1 vs. uniprot
Match: A0A2V3IYH0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYH0_9FLOR)

HSP 1 Score: 320 bits (819), Expect = 1.940e-101
Identity = 220/475 (46.32%), Postives = 295/475 (62.11%), Query Frame = 0
Query:    3 VGEEETLAPSPRDRARPRMVQTRQSLGAVGRVASRVKTSGMSMIPTSILGWGKDDEQNASVSPWAAENTASARMEHTTPQAEAESEALKKKNTRSPRTQDSAAFASPVSNTSRQGTMEDVSRNIQRRRTGHFTA-LSRKSDM--DKAAELNGQTLLKSSSNVVPRRRSTHKGRGETIT--RSTL------DLREEKSGAGTFNPTSLMKGVSKLILRNGGGDADVKPTASSGEHMKQSVP-GTSPVSDDLENDNQHQKTLKTSRLSRGFGLHKEKPKEDAEVSKKKMIVTPAKESRIAQSKSKAAIEVSKGLAKSISSAARAPLDLVSDKSTSANHQARGSKQHDGKHQVQFSASGKAKDKEVKNPKLRSSWFGFGREETSTDDSRKRGPTRVRGKSRLRTHINPSHAEKGTPSAEVKKKNPKGLDHVVDFAVDDYFDSEEDEIEAGGNVRSLAEDDFISYQTRHMRKGDRGRNR 465
            + +EETLAPSPRDR+R R+  +RQ L AVGRVASRV++SG+S IP SIL  GK++EQ+ + SPW   + A+ +    +     +S A KKK   SP+ + S    SP+SN+S+Q T+ DV R+I+RR+T + +  + RKS    DK+   +G  ++KS+S     +R T       +T   ST+      DL++ KSG   F+   LM+GVSKLI R G          SS    K S   G SPVSD+ EN+   + + +  R S G GLH++  K+    +K K +VTP K+  IAQ+KS+AA+E++KGLAKSISS AR PL++  DK T A   A+G+  +D K           KD E K  K RSSWFG GR++   D  ++RG    RGKSR+R   +P      + S   KK++PKGLD VVDFAVDDYFDSEEDEIEAG NVRSLAEDDFISYQTR ++KG+RG+NR
Sbjct:    1 MSDEETLAPSPRDRSRTRVTPSRQPLVAVGRVASRVRSSGLSKIPASILARGKEEEQHRNTSPWGVGSDATPKGLRISECHLDDSNAGKKKF--SPKGRKSTFTTSPLSNSSQQETLTDVDRSIRRRKTTNISGTVHRKSSTEGDKSENQHGPGMVKSTS-----KRGTRHADAPNMTDASSTVSPTAGGDLKKGKSGP--FSTAFLMRGVSKLIFRGGXXXXXXXXXPSSDPQEKSSSKSGVSPVSDECENEFDAKPSPREQRSSLGLGLHRDAVKQSMRRNKNKALVTPQKQQNIAQNKSRAAVEMTKGLAKSISSVARTPLEIGKDK-TRAPTFAKGNNNNDTKKS--------RKDNEQKPRKTRSSWFGLGRDDVH-DGEKERGGGHKRGKSRVRAFSSPQKIGDASASGLTKKRSPKGLDKVVDFAVDDYFDSEEDEIEAGANVRSLAEDDFISYQTRQLKKGERGKNR 456          
The following BLAST results are available for this feature:
BLAST of Ggra10869.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IYH01.940e-10146.32Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..413
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000125_piloncontigtig00000125_pilon:243454..244851 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10869.t1Ggra10869.t1Gracilaria gracilis GNS1m malemRNAtig00000125_pilon 243454..244851 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10869.t1 ID=Ggra10869.t1|Name=Ggra10869.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=466bp
MDVGEEETLAPSPRDRARPRMVQTRQSLGAVGRVASRVKTSGMSMIPTSI
LGWGKDDEQNASVSPWAAENTASARMEHTTPQAEAESEALKKKNTRSPRT
QDSAAFASPVSNTSRQGTMEDVSRNIQRRRTGHFTALSRKSDMDKAAELN
GQTLLKSSSNVVPRRRSTHKGRGETITRSTLDLREEKSGAGTFNPTSLMK
GVSKLILRNGGGDADVKPTASSGEHMKQSVPGTSPVSDDLENDNQHQKTL
KTSRLSRGFGLHKEKPKEDAEVSKKKMIVTPAKESRIAQSKSKAAIEVSK
GLAKSISSAARAPLDLVSDKSTSANHQARGSKQHDGKHQVQFSASGKAKD
KEVKNPKLRSSWFGFGREETSTDDSRKRGPTRVRGKSRLRTHINPSHAEK
GTPSAEVKKKNPKGLDHVVDFAVDDYFDSEEDEIEAGGNVRSLAEDDFIS
YQTRHMRKGDRGRNR*
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