Ggra10867.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra10867.t1
Unique Name	Ggra10867.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	461

Homology

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BLAST of Ggra10867.t1 vs. uniprot
Match: A0A2V3ISX8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISX8_9FLOR)

HSP 1 Score: 530 bits (1366), Expect = 3.480e-184
Identity = 276/453 (60.93%), Postives = 347/453 (76.60%), Query Frame = 0

Query:    1 MIRNNKLSYSSVDRPWHAFEVPHTSLSSLVTSVLVTVISYQVASILLSFTLGLKKRNETKLKNYGIALLTRYLSSPLAVMNSIFRMDWLTRLYYYGDIPSDTRISRDPARVKFRTTAALLLLLVATPIFDTLLVALNLSRTSDLTFEEAGFRGVQLGVHQELNVVETIPYLSLCRSAKFEERSGDLVRAVFQLCDTPMLAEEEAPSVSGLDISLERQSHVYVKVIFQGSVKFGAKWTQLSGVGKEKNMKASITNNSVLPLVDVALDRFAVYCGGRTVIDGMRAQQNRESGANNMPIASVRVACNDTIMAKQERLMYATELLEMVRTKLTFVESERTLVRDVTDLTGEFVEESDGVLLQRTERNSSTFTLIAVCVALVLVRATVGMFLANDVEAGLEWLLLNRLGFAVGSTTVWSSAERIRFRNKYQDGDSCQLGMEREDLTEVESFHGGVVGK 453
            MIRNNKLSY+SV+R W+ F++  TSLSSLVTSVLVT+ISYQVASIL + TLG+KKR+ETKLKN+GI LLTRYLSSPLAV+NSI R+DWLTRLYY GDIP DT ISRDPA V  RT + L LL++A P+ DT+LVAL+LSRT++LTFEEAGFRGV LGV + LNVVETIPY+SLC  AKFEER  DLVR  FQLC++P L E+   +V+G++ISLE Q  V V+VI QG V    K+ Q++G   E ++ A++TN SV PLVD+ALD FA +CG R  +  +  +QN   G N + +ASVRVAC +  ++++ER  +AT+++E ++ K+TF+E+E TLVR+ +DL   FVE  + VLLQRTERNSS F LI V V L+LVRAT+G   ANDVE GLE L+L+RLG     TT+W   ER+RFR KYQ G+ CQLG+E E+  EVESF GGVVG+
Sbjct:    1 MIRNNKLSYASVEREWYLFDISQTSLSSLVTSVLVTLISYQVASILFTITLGMKKRHETKLKNFGIVLLTRYLSSPLAVLNSILRVDWLTRLYYRGDIPRDTHISRDPASVHVRTASVLFLLVIAPPMIDTMLVALSLSRTNELTFEEAGFRGVLLGVDRGLNVVETIPYVSLCNLAKFEERPEDLVRVAFQLCESPSLPEDAPENVTGVEISLENQVQVVVRVILQGYVLLSQKYAQVNGNDVEMHVMAAVTNRSVAPLVDIALDGFAKHCGERNTLGPLPPKQNDVFGTNKVLLASVRVACGNVTISEEERRTHATQIVESLKEKVTFIEAESTLVRNASDLGSNFVENKNDVLLQRTERNSSMFMLIVVAVILLLVRATLGTIFANDVEKGLEVLILDRLGCGERHTTMWKDVERVRFRKKYQYGERCQLGLELEETAEVESFRGGVVGE 453

The following BLAST results are available for this feature:

BLAST of Ggra10867.t1 vs. uniprot

BLAST of Ggra10867.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3ISX8	3.480e-184	60.93	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 367..387
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 417..460
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 399..416
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..28
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 85..116
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 53..63
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 139..366
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 29..52
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 388..398
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 117..138
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 64..84
None	No IPR available	TMHMM	TMhelix		coord: 64..86
None	No IPR available	TMHMM	TMhelix		coord: 398..416
None	No IPR available	TMHMM	TMhelix		coord: 116..138
None	No IPR available	TMHMM	TMhelix		coord: 366..388
None	No IPR available	TMHMM	TMhelix		coord: 29..51

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000125_pilon	contig	tig00000125_pilon:238572..239954 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra10867.t1	Ggra10867.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000125_pilon 238572..239954 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra10867.t1 ID=Ggra10867.t1|Name=Ggra10867.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=461bp
MIRNNKLSYSSVDRPWHAFEVPHTSLSSLVTSVLVTVISYQVASILLSFT
LGLKKRNETKLKNYGIALLTRYLSSPLAVMNSIFRMDWLTRLYYYGDIPS
DTRISRDPARVKFRTTAALLLLLVATPIFDTLLVALNLSRTSDLTFEEAG
FRGVQLGVHQELNVVETIPYLSLCRSAKFEERSGDLVRAVFQLCDTPMLA
EEEAPSVSGLDISLERQSHVYVKVIFQGSVKFGAKWTQLSGVGKEKNMKA
SITNNSVLPLVDVALDRFAVYCGGRTVIDGMRAQQNRESGANNMPIASVR
VACNDTIMAKQERLMYATELLEMVRTKLTFVESERTLVRDVTDLTGEFVE
ESDGVLLQRTERNSSTFTLIAVCVALVLVRATVGMFLANDVEAGLEWLLL
NRLGFAVGSTTVWSSAERIRFRNKYQDGDSCQLGMEREDLTEVESFHGGV
VGKGVMSAGA*