Ggra10829.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10829.t1
Unique NameGgra10829.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1532
Homology
BLAST of Ggra10829.t1 vs. uniprot
Match: A0A2V3IRP8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRP8_9FLOR)

HSP 1 Score: 1684 bits (4361), Expect = 0.000e+0
Identity = 916/1432 (63.97%), Postives = 1078/1432 (75.28%), Query Frame = 0
Query:    9 FKRNAAAKYAPLVQLSATQHCDAAVRTA-SNHRNLLSLLSEQLPGGNRPPLRLLTPAQLKETSPRSFARALLDGARDVDRGLAAVAAALKERLEQLTVAASHEGFVRPLLSVVAVWVCEPHIADAVSVSSMREPPFVLLVARPTAQDNAALQSVSNSLASHPAPRLILRLGDHKHTHPPESDGLEQSAAAIAAQLDSSAR---------------SVLNAQLNEAVAAADTARRAVRSSFRSWFSASSTST------TSMSMPVGDTAPPPRAPIGTTSSSVTDAAQLAPNTTAAAMRRLADLALMAGRYTDASDAYRMLAAEVRTFSSAAAVHHASALELGAMSLALIDGSNAAIGAALESAVLRYVDANRPELAARAALRAVDFCLAAGYPDSAAGVLVRAISALRPGGSDTT-PPLVDAVLAVLCAVCSDAFVRLKHPRRASRFAFFSAIRFAKLRYFAAAAAAAEAIDGPALQRAAIRHHVQYWMGEAALSGANPVSAVRHFSSVLVEAKNPAQSSSVEVHASVVRAFLRALKIGAVQKLSSRWDSGVSFPLVDTAFSYVRTHDMADCDVEWHALEDEVLEDAEFFEKLAKGDGV-VKRERRIEALISELRHAKRNGQNDPGGSLEMKIRRMRVLANARKRRRRAASLLERGAVLGETVLLHTRLKNPLQFPVFVNSMSAVVSLDGQCYSLFDKPGDDPESDPPP-VQLFEAPAVTIAPNSEKSVVLKITGQKAGVLQCIGVCWKFTIGMSATFVPDSSTVFAPGFALLHRHGRRLNDTRHQRASDLPLYEEDKSLTVTIAPLAPKLKTTLFIPHFPLMSQENLDPTLTMRAGEVRKGQLELENEGRKALESIVFRIGTPQTMYLGIEPEIEQEDGHKRVFAVGMREQEVEQSEVVAAGRLTLRLAPGQKTRVSVWMRAAVSNVVFPHRSSLSENIKLQRTSN-RNEDGAESGPPLRDVKLAIAYGTGSLRMCRVSLRFRVHPSVMVSPRFLREADLSSISPDASNKIGCLFGVEVEHAGPSEMESVDFDITKLTVTSKHGWKPMVLPAPVVPMAIKRSDMRPSNHTLRINETATFFVFLVRDRSVKDGCEVNDKHDGLSVSSHKWETFVADLDRNSTTSNEKHLIGTVKNTSLEEETVENYEDEDGDI------WDRKAVTHFVVCSRHHSHSHRPGRGHDRPDRVYVTVGWRTDEENEGDIQIPSIDPLKWMKETKAHEHGVEPPTSSQDEIPHVNPNVMQDVVEGIGALQINDYEKDPVQVRVSHPKRVEHDFFRRTNQDELGLVSEQSSIVAYPAVVPVDVLVKNVSNVVLDVAFAAPTEGGVADGERGRYWTGDVSMSLRSIAPGAERTICLTAVLISPGQYNMCRFTMLYQTSSFVPNRRRQHIAVSPSCMTVEAIGDYKFCEDDMLEEQAEFISLRRSSRR 1408
            FKR AAA++AP +QL AT HCDAAVRTA + HRNL SLLS  LP    PPLR+LT   +  T PR+  RALLD  RD    LA ++ AL +RLE  T+A SH+ F  PLL+VVAVWVCEP I+ A++     +PP VLLVARPTAQD  ALQ V  SLASHPAP L+LR                                              + LN +LN+A  AA+  RR+ R+SFRSWFS S+TST      + +S+   D          T ++S +DA +LAPNT A AMR+LADLALMAGRYTDA +AYR LAAEVR+ SSAA+VHHASALE+ A+SLAL+DGSN+AIG+A ESA++RY DANRPELAARAALRAV FCLAAG+PDSAAGVLVRAI+ LRP  + T+ PPL+D VLA LCA C+DAF RLKH RRASRFAFF+A+ FA+LR+F AAA  A A+D  ALQR +IRHHVQYWMGEAALS + PV+AVR+FSSVL EA+   QS  +++++SVV+AFLRALK GA ++LS+RWDSGV+FPL++ AFS+V+THDM D D EWHALEDEVLED EFFEKLA G    V+RERR+EAL+SELRHAKR+G+NDPGGSLEMKIRRMR LANARKRRRRAASLLERGAV+GE V LH RL NPLQFPV+++S+SAVVSLDGQCYSLFDK   + ++DPPP VQLFEA  +TI  NS + VVL+I   KA  LQ IG+CWKF+IGM  TF+PD +TVFAPGFALLHR GRRLNDTR  RASD+PLYEEDKSLTVTIAP+APKLK  L IPHFPL  Q+  DP L MRAGEVRKG LELEN+G   L+SIV RIGTPQT+YLG++ E+E E   KRVFA+GM+EQ VEQSE+VAA R++L+L PG+ TR+ VW+RAA+++  F  RS LSENIKLQR  N RN+D  + G P RD+KLAIAYG+   RM RVS+ F+VHPS+MVSPRFLREADL  ISP AS+KIGCLFGVEVEHAGPSE E  DFDIT+LTVTS+HGWKPM+LP PVVP A K  D+RP+ +TLRINETATFFVFLVR+R VK+  E     D     +H W T++   D      NE H    +K   L   T  N +   GD+      WDR A THFVVCS+HH + HR G  +DR DRVYVTVGWRT + NEGDI IPSIDPL+WMK++K  + G E    + +    VNPNVMQDVVEGIGALQ NDYE+DPVQVRV HP +VEHDFFR +         +QSS VAYPAVVPVDVLVKNVS+ VLDVAFAA TEGGVADG+RGRYWTGDVSMSLR+IAPGAERTICLTAVLISPG+YNMCRFTMLYQTSSFVPNR+RQHI++ PS MTVEA+GDYKFCEDD L ++ +   L  S R+
Sbjct:   22 FKRRAAARHAPSLQLRATLHCDAAVRTADATHRNLRSLLSAYLPNSAAPPLRVLTAEHVAITPPRALPRALLDSLRDPPSRLAKLSDALLDRLESATLALSHDIFALPLLTVVAVWVCEPDISAALAAFPTHQPPLVLLVARPTAQDAHALQRVQQSLASHPAPVLVLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQLNLRLNDAALAANRIRRSTRTSFRSWFSTSTTSTXRTSDDSHLSVSTSDL---------TAATSTSDATRLAPNTVAFAMRQLADLALMAGRYTDACEAYRNLAAEVRSLSSAASVHHASALEMEAISLALLDGSNSAIGSAFESAIVRYSDANRPELAARAALRAVHFCLAAGFPDSAAGVLVRAITLLRPSEAQTSAPPLLDVVLATLCAACADAFTRLKHMRRASRFAFFAAVSFARLRHFVAAATVATAVDASALQRPSIRHHVQYWMGEAALSSSKPVAAVRNFSSVLAEAQPSPQSCDLQLYSSVVQAFLRALKNGAAERLSARWDSGVAFPLLEVAFSFVQTHDMGDTDSEWHALEDEVLEDVEFFEKLANGRKTGVQRERRVEALVSELRHAKRSGKNDPGGSLEMKIRRMRDLANARKRRRRAASLLERGAVIGEPVFLHARLTNPLQFPVYMSSLSAVVSLDGQCYSLFDKQNKNTDTDPPPPVQLFEAEPLTIPANSSRDVVLRIVACKARTLQFIGLCWKFSIGMLPTFIPDDNTVFAPGFALLHRRGRRLNDTRRHRASDVPLYEEDKSLTVTIAPVAPKLKAELCIPHFPLSMQDEDDPNLIMRAGEVRKGHLELENDGPMPLDSIVLRIGTPQTLYLGLQLEVEGEGEQKRVFAIGMKEQPVEQSEIVAAARVSLQLDPGESTRIPVWIRAAINSAAFAQRSPLSENIKLQRRQNSRNDDRTDGGLPQRDIKLAIAYGSEQPRMSRVSMSFKVHPSIMVSPRFLREADLRMISPQASDKIGCLFGVEVEHAGPSETEDADFDITELTVTSRHGWKPMLLPKPVVPKAAKNLDIRPAPNTLRINETATFFVFLVRNRDVKENVE----RDSTEPHAHMWGTYICHFD------NEPHACRDMKEVELLSPTALNNDLSKGDVNEDDHKWDRCATTHFVVCSKHHLNVHRHGNSYDRLDRVYVTVGWRTSDGNEGDIHIPSIDPLRWMKDSKKADSGQENAPPAVEAQSQVNPNVMQDVVEGIGALQANDYEEDPVQVRVCHPLKVEHDFFRNSEVGNNDSTDDQSSAVAYPAVVPVDVLVKNVSSGVLDVAFAASTEGGVADGDRGRYWTGDVSMSLRAIAPGAERTICLTAVLISPGRYNMCRFTMLYQTSSFVPNRKRQHISMKPSFMTVEAVGDYKFCEDDALVDRIDTAPLMPSRRK 1434          
BLAST of Ggra10829.t1 vs. uniprot
Match: A0A7S1XAP5 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XAP5_9RHOD)

HSP 1 Score: 81.6 bits (200), Expect = 5.680e-12
Identity = 102/425 (24.00%), Postives = 173/425 (40.71%), Query Frame = 0
Query:  702 VTIAPNSEKSVVLKITGQKAGVLQCIGVCWKFTIGMSATFVPDSSTVFAPGFALLHRHGRRLNDTRHQRASDLPLYEEDKSLTVTIAPLAPKLKTTLFIPHFPLMSQENLDPTLTMRAGEVRKGQLELENEGRKALESIVFRIGTPQTMYLGIEPE-IEQEDGHKRVFAVGMREQEVEQSEVVAAGRLTLRLAPGQKTRVSVWMRAAVSNVVFPHRSSLSENIKLQRTSNRNEDGAESGPPLRDVKLAIAYGTGSLRMCRVSLRFRVHPSVMVSPRFLREADLSSISPDASNKIGCLFGVEVEHAGPSEMESVDFDITKLTVTSKHGWKPMVLPAPVVPMAIKRSDM---RPSNHTLRINETATFFVFLVRDRSVKDGCEVNDKHDGLS-VSSHKWETFVADLDRNSTTSNEKHLIGTVKNTSLE 1121
            V +  +S+  V L +   KAG  + + + W F +        + S    P    + R+G+RLN TR +R S +PLY  + SL V +     ++   L           N + +  +R G+   G +++ N+G   + SI    GTP +++   +P+  E  +   R F                  R  L +  G+      W+RA   N      S+L   +   +    +  G + G   R              + R+     V P ++  PRFLR    +      S +   + GVE+EH+     E+  + I +L V++   WK   L  P  P  +   ++   R S   LR+NETAT F+ L R+ S     E      G S +   K ET  + LDR+   ++++ L+    N ++E
Sbjct:    3 VVLDQHSKVQVTLSVRPSKAGDARLVALRWSFFL----LGEENESQHACPCRVEIRRNGQRLNSTRKERCSPVPLYGPENSLRVRVCKGGSRITVRL-----------NSNVSSYVREGQQWVGSVDVLNQGSSPVRSIHVTNGTPSSIFF--DPDSCEISEKRNRSF------------------RCNLTIVEGESFCHPCWLRATSGN--SDGISNLVRVVFFYKVDLVDGKGRDLGQVWR--------------IARLRHTVEVKPCIVAFPRFLRS---NPFIQGRSREF--ILGVEIEHSWTEGGET--YRIVELGVSASSCWKVTGLCTPSYPSVLSEEEVAKIRNSPVQLRVNETATLFLTLRRNFSEDSLAEGT----GTSRIPMGKPET--SSLDRSYELASKQFLLAAYPNRAVE 363          
The following BLAST results are available for this feature:
BLAST of Ggra10829.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IRP80.000e+063.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1XAP55.680e-1224.00Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 584..604
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1428..1461
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1404..1461
IPR024420TRAPP III complex, Trs85PFAMPF12739TRAPPC-Trs85coord: 213..449
e-value: 1.0E-14
score: 54.3
IPR024420TRAPP III complex, Trs85PANTHERPTHR12975TRANSPORT PROTEIN TRAPPcoord: 235..1355

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000192_piloncontigtig00000192_pilon:191800..196395 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10829.t1Ggra10829.t1Gracilaria gracilis GNS1m malemRNAtig00000192_pilon 191800..196395 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10829.t1 ID=Ggra10829.t1|Name=Ggra10829.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1532bp
MGDDAARHFKRNAAAKYAPLVQLSATQHCDAAVRTASNHRNLLSLLSEQL
PGGNRPPLRLLTPAQLKETSPRSFARALLDGARDVDRGLAAVAAALKERL
EQLTVAASHEGFVRPLLSVVAVWVCEPHIADAVSVSSMREPPFVLLVARP
TAQDNAALQSVSNSLASHPAPRLILRLGDHKHTHPPESDGLEQSAAAIAA
QLDSSARSVLNAQLNEAVAAADTARRAVRSSFRSWFSASSTSTTSMSMPV
GDTAPPPRAPIGTTSSSVTDAAQLAPNTTAAAMRRLADLALMAGRYTDAS
DAYRMLAAEVRTFSSAAAVHHASALELGAMSLALIDGSNAAIGAALESAV
LRYVDANRPELAARAALRAVDFCLAAGYPDSAAGVLVRAISALRPGGSDT
TPPLVDAVLAVLCAVCSDAFVRLKHPRRASRFAFFSAIRFAKLRYFAAAA
AAAEAIDGPALQRAAIRHHVQYWMGEAALSGANPVSAVRHFSSVLVEAKN
PAQSSSVEVHASVVRAFLRALKIGAVQKLSSRWDSGVSFPLVDTAFSYVR
THDMADCDVEWHALEDEVLEDAEFFEKLAKGDGVVKRERRIEALISELRH
AKRNGQNDPGGSLEMKIRRMRVLANARKRRRRAASLLERGAVLGETVLLH
TRLKNPLQFPVFVNSMSAVVSLDGQCYSLFDKPGDDPESDPPPVQLFEAP
AVTIAPNSEKSVVLKITGQKAGVLQCIGVCWKFTIGMSATFVPDSSTVFA
PGFALLHRHGRRLNDTRHQRASDLPLYEEDKSLTVTIAPLAPKLKTTLFI
PHFPLMSQENLDPTLTMRAGEVRKGQLELENEGRKALESIVFRIGTPQTM
YLGIEPEIEQEDGHKRVFAVGMREQEVEQSEVVAAGRLTLRLAPGQKTRV
SVWMRAAVSNVVFPHRSSLSENIKLQRTSNRNEDGAESGPPLRDVKLAIA
YGTGSLRMCRVSLRFRVHPSVMVSPRFLREADLSSISPDASNKIGCLFGV
EVEHAGPSEMESVDFDITKLTVTSKHGWKPMVLPAPVVPMAIKRSDMRPS
NHTLRINETATFFVFLVRDRSVKDGCEVNDKHDGLSVSSHKWETFVADLD
RNSTTSNEKHLIGTVKNTSLEEETVENYEDEDGDIWDRKAVTHFVVCSRH
HSHSHRPGRGHDRPDRVYVTVGWRTDEENEGDIQIPSIDPLKWMKETKAH
EHGVEPPTSSQDEIPHVNPNVMQDVVEGIGALQINDYEKDPVQVRVSHPK
RVEHDFFRRTNQDELGLVSEQSSIVAYPAVVPVDVLVKNVSNVVLDVAFA
APTEGGVADGERGRYWTGDVSMSLRSIAPGAERTICLTAVLISPGQYNMC
RFTMLYQTSSFVPNRRRQHIAVSPSCMTVEAIGDYKFCEDDMLEEQAEFI
SLRRSSRRRSTGSQRTPVSQRGRRVSSVPIAHTREKGEKRPEGNNVLRHG
SRTEKDEDNVNLGKRHEDVKASGVSGIPGRIRTLESAAKDVSPVRSNSGR
ITRTRGEGKSAQLLSELKNDAFWNDADTDEE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024420TRAPP_III_complex_Trs85