Ggra10639.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra10639.t1
Unique Name	Ggra10639.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	410

Homology

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BLAST of Ggra10639.t1 vs. uniprot
Match: A0A2V3J4M7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4M7_9FLOR)

HSP 1 Score: 283 bits (724), Expect = 6.820e-89
Identity = 186/346 (53.76%), Postives = 219/346 (63.29%), Query Frame = 0

Query:   74 PKRPASPNA-PHN-AQLLFEPNTSDVSDSASNDAPHSSSHTDLVFIDDVPHVKFCNVGEEEEPLIPDSSTPYISPTSTSSPYSSSVAALSKQNDVLTSENNDLHRXXXXXXXXXXXXXXXXXXXXXXXXXXTRQFNDVRSKLTRKVRHLEAELTSITSSSTAASTQPSRSSRARAP-------NAHVPHEL---QPSTSSRAFARVQSLGSVSESCRRRSTRPTTLPIAQSQSGASVRRAFDGDTSVASPATRARQSLIRRAFVAHIHAHKYRTARQAWLHFLGAERQQVTLATFSACVRELAVASEASDRELQLLMQEICEVAVGQHTVMSWNMFSRFYNRCKHE 407
            P RP  P   PHN    L + +TSDVSDS SN+ P SS   DL+FIDDVPH+K  NVGEEEEPLIPD+++ +  P S S   + S  A+   ND L  EN  L                            TRQ  D RSKL  ++R LE+EL S T + T+  T  SR++R RA        +   P+EL   QPST+  AF RVQS GSV+ES RRRS R +      S   ++VRR  D DTSVASPATRARQSLIRRAFVAHIHA KYRTARQAW+ FLGA RQ V L++F+ACVR LAVA+EASDRELQLLMQEICEV V QHTVM+W MFSRFY+  + E
Sbjct:   47 PSRPQPPQKLPHNPTNPLLDAHTSDVSDSTSNE-PTSSPDADLLFIDDVPHIKISNVGEEEEPLIPDNASSFNVPLS-SEQSNLSQHAMRSHNDRLLQENRSLQTQNSQLQSELDAHRARASTTSAELLSLTRQLADTRSKLNNRIRQLESELASATCA-TSTCTHHSRTARTRASVPSPVPTSPRTPNELPPSQPSTNHLAFNRVQSTGSVAESTRRRSVRHSA-----SLRNSTVRRVMDADTSVASPATRARQSLIRRAFVAHIHAQKYRTARQAWIQFLGAHRQAVELSSFAACVRGLAVAAEASDRELQLLMQEICEVPVSQHTVMTWAMFSRFYDSTRKE 384

The following BLAST results are available for this feature:

BLAST of Ggra10639.t1 vs. uniprot

BLAST of Ggra10639.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J4M7	6.820e-89	53.76	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 157..191
None	No IPR available	GENE3D	1.10.287.1490		coord: 148..251 e-value: 6.5E-6 score: 27.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..63

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000904_pilon	contig	tig00000904_pilon:466265..467494 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra10639.t1	Ggra10639.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000904_pilon 466265..467494 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra10639.t1 ID=Ggra10639.t1|Name=Ggra10639.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=410bp
MKATAHRHRQSSASADARRSRRLFSRPAPARHNSERTAPLQSTMTIPPPT
RRRFLSRSSSNRPPRRVFARLAHPKRPASPNAPHNAQLLFEPNTSDVSDS
ASNDAPHSSSHTDLVFIDDVPHVKFCNVGEEEEPLIPDSSTPYISPTSTS
SPYSSSVAALSKQNDVLTSENNDLHRKNSALQAELDAMRSKSSAVSAELA
ALTRQFNDVRSKLTRKVRHLEAELTSITSSSTAASTQPSRSSRARAPNAH
VPHELQPSTSSRAFARVQSLGSVSESCRRRSTRPTTLPIAQSQSGASVRR
AFDGDTSVASPATRARQSLIRRAFVAHIHAHKYRTARQAWLHFLGAERQQ
VTLATFSACVRELAVASEASDRELQLLMQEICEVAVGQHTVMSWNMFSRF
YNRCKHEST*