Ggra10538.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10538.t1
Unique NameGgra10538.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length277
Homology
BLAST of Ggra10538.t1 vs. uniprot
Match: A0A2V3INA6 (DNA-binding protein BIN4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INA6_9FLOR)

HSP 1 Score: 196 bits (499), Expect = 3.160e-58
Identity = 125/267 (46.82%), Postives = 172/267 (64.42%), Query Frame = 0
Query:    1 MSESSSDDGFFSDSSGKLDLLSVKQNLQSVGDEANLANSSEAHKSTSNAQQDSSRDEPAWVLDHSQSRPTDQENRRRVLASLSEDDGDE-SIIDLVSQEPSFEVAQKPIIEK--KDNSGQESVPKPQEQQKPARAPRSSLPLTVASKIDDSLVLLQSSDESLDLSGDVGAVGRVKVSEEGLFFDIKGVVYKVTTHATNTACVVQMVDDEARVTSVMDEVLTLHMDRNLFASDEIIINGNLDDHSDQESMFEEDRRNSEQPVRGKRKK 264
            MS S S DGF SD S ++DLLSV   L+S+ +    +         + +Q      EP WVL+ +Q+ P D E RRR + S+ +      S+IDL+SQEP   +  KP +E+  K+ +G    P+     + ++ P+S+L L VA K+D+SLVLLQS+DESLDLSGD+GAVGR K+ ++ LF DIKGVVY+    A NTACVV M DDEARVTSV+ EVLTLH +RNLF SDEI+ING+L +   +++   E+  + +Q  +GK KK
Sbjct:    1 MSGSDSADGFLSDGSDQIDLLSVSNRLRSLTENGKASTQDPCVSQATPSQPSKKEKEPGWVLNQTQALPDDAEARRRAITSMFDXXXXXXSVIDLISQEPGNSL--KPHLEENQKNEAGPTKAPR---NHRHSQTPKSTLKLAVAPKLDESLVLLQSNDESLDLSGDLGAVGRAKIHDDDLFLDIKGVVYRAKNQACNTACVVHMADDEARVTSVLGEVLTLHAERNLFTSDEIVINGDLSEEL-EDTYSSEEAVSRDQLEKGKGKK 261          
BLAST of Ggra10538.t1 vs. uniprot
Match: A0A6D2I5E1 (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2I5E1_9BRAS)

HSP 1 Score: 82.0 bits (201), Expect = 3.900e-14
Identity = 66/215 (30.70%), Postives = 112/215 (52.09%), Query Frame = 0
Query:   56 DEPAWVL--DHSQSRPTDQENRRRVLASLSEDDGDESIIDLVSQEPSFEVAQKPI-----------IEKKDNSGQESVPKPQEQ--------------QKPARAPRSSLPLTVASKIDDSLVLLQSSDESLDLSGDVGAVGRVKVSE--EGLFFDIKGVVYKVTTHATNTACVVQMVDDEARVTSVMDEVLTLHMDRNLFASDEIIINGNLDDHS 241
            D+  W+L  D  Q  P     R++V+AS  +D+  + +I     EP+ + A K             I KK+NS +E +    E                KP+    S LPL ++ K++ + VL++   +S+DLSGD+GAVGRV VS+  E ++ D+KG +YK T   + T C+V +   EA++ ++M++ + L    N+F + E ++ G L+ +S
Sbjct:  120 DDSVWLLSSDSEQGSPI----RQQVIASPEKDE--DFVIQAKEGEPAVKKASKXXXXXXXXKSGCQIPKKENSPEEILKTEDEDTDAVLAEEVTTDKSNKPSSGSSSRLPLVLSEKVNRTKVLVECEGDSIDLSGDMGAVGRVVVSDTTEDVYLDLKGTIYKSTIVPSRTFCIVNVSQSEAKIEAIMNDFIQLTPQSNVFVA-ETMMEGTLEGYS 327          
BLAST of Ggra10538.t1 vs. uniprot
Match: V4K3G1 (Uncharacterized protein n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4K3G1_EUTSA)

HSP 1 Score: 82.0 bits (201), Expect = 3.960e-14
Identity = 63/213 (29.58%), Postives = 112/213 (52.58%), Query Frame = 0
Query:   56 DEPAWVLDHSQSRPTDQENRRRVLASLSEDDGDESIIDLVSQEPSFEVA-QKPIIEKKDNSGQESVPKPQEQQ------------------------KPARAPRSSLPLTVASKIDDSLVLLQSSDESLDLSGDVGAVGRVKVSEE--GLFFDIKGVVYKVTTHATNTACVVQMVDDEARVTSVMDEVLTLHMDRNLFASDEIIINGNLDDHS 241
            D+  W+L      P+   +R++++ S  +D+  +S+I     EP+ + A +K   +KK NSG ++ PK +  Q                        K +    S LPL ++ K++ + VL++   +S+DLSGD+GAVGRV VS+    ++ D+KG +YK T   + T CVV +   EA++ ++M++ + L    N+F + E ++ G L+  S
Sbjct:  124 DDSVWLLSSDSEPPSSDPSRQKMIMSTEKDE--DSVIQAKEGEPAVKKAPKKKSPKKKPNSGHQT-PKNESAQEILINDDKDTDAIVAKEVTTDKNVKSSSGSSSRLPLVLSEKVNRTKVLVECEGDSIDLSGDMGAVGRVVVSDTTGDVYLDLKGTIYKSTIVPSRTFCVVNVGQSEAKIEAIMNDFIQLTPQSNVFEA-ETMVEGTLEGFS 332          
BLAST of Ggra10538.t1 vs. uniprot
Match: A0A2R6Q9E3 (DNA-binding protein n=2 Tax=Actinidia TaxID=3624 RepID=A0A2R6Q9E3_ACTCC)

HSP 1 Score: 80.5 bits (197), Expect = 1.140e-13
Identity = 53/137 (38.69%), Postives = 81/137 (59.12%), Query Frame = 0
Query:  109 IEKKDNSGQESVPKPQEQQKPARAPRSS--LPLTVASKIDDSLVLLQSSDESLDLSGDVGAVGRVKVSE-----EGLFFDIKGVVYKVTTHATNTACVVQMVDDEARVTSVMDEVLTLHMDRNLFASDEIIINGNLD 238
            I+KK N G   V K +  +K      SS  LPL ++ K++ S  L++   ES+DLSGDVGAVGRV VS+     + +FFD+KG +YK T   + T CVV     EA++ ++M++ + L    N++ + E ++ G LD
Sbjct:  162 IDKKGNDGDVEVAKEEIAEKHIEPHFSSSRLPLVLSEKVNRSKALVECEGESIDLSGDVGAVGRVVVSDNPSGNQEVFFDLKGTIYKTTIVPSRTFCVVSFGQSEAKIEAIMNDFIQLTPQSNVYEA-ETMVEGTLD 297          
BLAST of Ggra10538.t1 vs. uniprot
Match: A0A453NB76 (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453NB76_AEGTS)

HSP 1 Score: 77.0 bits (188), Expect = 1.490e-13
Identity = 52/151 (34.44%), Postives = 78/151 (51.66%), Query Frame = 0
Query:  137 LPLTVASKIDDSLVLLQSSDESLDLSGDVGAVGRVKVSE-----EGLFFDIKGVVYKVTTHATNTACVVQMVDDEARVTSVMDEVLTLHMDRNLFASDEIIINGNLDD------------HSDQESMFEEDRRNSEQPVRGKRKKGPASPA 270
            LPLT+A K+  S  L++   +S+DLSGD+GAVGR+ +S        L  D+KG VYK T   + T CVV +   EA++ ++M++ + L    NLF S E ++ G LD             H    S  + +  N +QP    ++K    PA
Sbjct:   21 LPLTIADKVQRSKALVECDGDSIDLSGDIGAVGRIVISNGPTGNHDLLLDLKGTVYKSTIVPSRTFCVVSVGQTEAKIEAIMNDFIQLEPHSNLFES-ETMMEGTLDGFTFDSDGEGDRLHELNASQNDPNNENEDQPKGKTKRKATVKPA 170          
BLAST of Ggra10538.t1 vs. uniprot
Match: A0A7S0BNE3 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BNE3_9RHOD)

HSP 1 Score: 77.0 bits (188), Expect = 2.290e-13
Identity = 42/80 (52.50%), Postives = 56/80 (70.00%), Query Frame = 0
Query:  135 SSLPLTVASKIDDSLVLLQSSDESLDLSGDVGAVGRVKVSEEGLFFDIKGVVYKVTTHATNTACVVQMVDDEARVTSVMD 214
            +S+PL    K++++LVL QS++ S DLSGDVGAVGRVK+ E  L FD+KG  Y     A N+  VV + D EARV+SV+D
Sbjct:  120 NSIPLISPGKLEENLVLAQSAEVSFDLSGDVGAVGRVKIEEGKLSFDLKGTFYDAGRVACNSMLVVAVGDTEARVSSVID 199          
BLAST of Ggra10538.t1 vs. uniprot
Match: A0A3B6QEA2 (Uncharacterized protein n=13 Tax=Triticeae TaxID=147389 RepID=A0A3B6QEA2_WHEAT)

HSP 1 Score: 79.0 bits (193), Expect = 2.440e-13
Identity = 53/153 (34.64%), Postives = 80/153 (52.29%), Query Frame = 0
Query:  137 LPLTVASKIDDSLVLLQSSDESLDLSGDVGAVGRVKVSE-----EGLFFDIKGVVYKVTTHATNTACVVQMVDDEARVTSVMDEVLTLHMDRNLFASDEIIINGNLDD------------HSDQESMFEEDRRNSEQPVRGKRKKGPASPASK 272
            LPLT+A K+  S  L++   +S+DLSGD+GAVGR+ +S        L  D+KG VYK T   + T CVV +   EA++ ++M++ + L    NLF S E ++ G LD             H    S  + +  N +QP    ++K    PA+K
Sbjct:  136 LPLTIADKVQRSKALVECDGDSIDLSGDIGAVGRIVISNGPTGNHDLLLDLKGTVYKSTIVPSRTFCVVSVGQTEAKIEAIMNDFIQLEPHSNLFES-ETMMEGTLDGFTFDSDGEGDRLHELNASQNDPNNENEDQPKGKTKRKATVKPAAK 287          
BLAST of Ggra10538.t1 vs. uniprot
Match: DNA-binding protein BIN4 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F540D9 (DNA-binding protein BIN4 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F540D9)

HSP 1 Score: 78.6 bits (192), Expect = 2.510e-13
Identity = 48/119 (40.34%), Postives = 70/119 (58.82%), Query Frame = 0
Query:  128 KPARAPRSSLPLTVASKIDDSLVLLQSSDESLDLSGDVGAVGRVKVSEEG-----LFFDIKGVVYKVTTHATNTACVVQMVDDEARVTSVMDEVLTLHMDRNLFASDEIIINGNLDDHS 241
            KPA +  S LPL    K+  S  L++   ES+DLSGDVGAVGR+ VS+       LF D+KG +YK T   + T C+V +   EA++ ++M++ + L    N+F + E +I G LD  S
Sbjct:   98 KPATSLVSRLPLVFPEKVQRSKALVECDGESIDLSGDVGAVGRIIVSKGSSGNNELFLDLKGTIYKSTIVPSRTFCIVSVGQSEAKIEAIMNDFVRLEPQSNMFEA-ETLIEGTLDGFS 215          
BLAST of Ggra10538.t1 vs. uniprot
Match: DNA-binding protein BIN4 isoform X1 n=2 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E37F48 (DNA-binding protein BIN4 isoform X1 n=2 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E37F48)

HSP 1 Score: 78.2 bits (191), Expect = 3.280e-13
Identity = 49/119 (41.18%), Postives = 69/119 (57.98%), Query Frame = 0
Query:  128 KPARAPRSSLPLTVASKIDDSLVLLQSSDESLDLSGDVGAVGRVKVSEEG-----LFFDIKGVVYKVTTHATNTACVVQMVDDEARVTSVMDEVLTLHMDRNLFASDEIIINGNLDDHS 241
            KPA +  SSLPL    K+     L++   +S+DLSGDVGAVGR+ VS        LF D+KG +YK T   + T C+V +   EA++ +VM++ + L    NLF + E +I G LD  S
Sbjct:   94 KPAASLVSSLPLVFPDKVQRLKALVECDGDSIDLSGDVGAVGRIIVSNASSGNHELFLDLKGTIYKSTIVPSRTFCIVSVGQSEAKIEAVMNDFIRLEAKSNLFEA-ETMIEGTLDGFS 211          
BLAST of Ggra10538.t1 vs. uniprot
Match: A0A022RZB4 (Uncharacterized protein n=2 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022RZB4_ERYGU)

HSP 1 Score: 76.6 bits (187), Expect = 5.160e-13
Identity = 55/178 (30.90%), Postives = 94/178 (52.81%), Query Frame = 0
Query:  109 IEKKDNSGQESVPKPQEQQKPARAPRSSLPLTVASKIDDSLVLLQSSDESLDLSGDVGAVGRVKVSEEG-----LFFDIKGVVYKVTTHATNTACVVQMVDDEARVTSVMDEVLTLHMDRNLFASDEIIINGNLD-------DHSDQESMFEEDRRNSEQPVRGKRKKGPASPASKAR 274
            I K+DNSG+ + P         +A  S LPL ++ K+  S  L++   + +DLSGDVG+VGRV +S++      +F D+KG +YK T   + T CVV     EA++ ++M++ + L    N++ + E ++ G L+       D +D+     +     E+ + GK K+ P   +  AR
Sbjct:   30 IVKEDNSGKHAGP---------QASSSKLPLLLSDKVQRSKALVECEGDFIDLSGDVGSVGRVVISDDPSKNHEMFLDLKGTIYKTTIVPSRTFCVVSFGQSEAKIEAIMNDYIQLKPQSNVYEA-ETMVEGTLEGFSFGSEDEADKPVARADHGEGGEEQLDGKTKRKPDKTSGPAR 197          
The following BLAST results are available for this feature:
BLAST of Ggra10538.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INA63.160e-5846.82DNA-binding protein BIN4 n=1 Tax=Gracilariopsis ch... [more]
A0A6D2I5E13.900e-1430.70Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
V4K3G13.960e-1429.58Uncharacterized protein n=1 Tax=Eutrema salsugineu... [more]
A0A2R6Q9E31.140e-1338.69DNA-binding protein n=2 Tax=Actinidia TaxID=3624 R... [more]
A0A453NB761.490e-1334.44Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
A0A7S0BNE32.290e-1352.50Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A3B6QEA22.440e-1334.64Uncharacterized protein n=13 Tax=Triticeae TaxID=1... [more]
DNA-binding protein BIN4 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F540D92.510e-1340.34DNA-binding protein BIN4 n=1 Tax=Dendrobium catena... [more]
DNA-binding protein BIN4 isoform X1 n=2 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E37F483.280e-1341.18DNA-binding protein BIN4 isoform X1 n=2 Tax=Phalae... [more]
A0A022RZB45.160e-1330.90Uncharacterized protein n=2 Tax=Erythranthe guttat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..262
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..82
IPR033246DNA-binding protein BIN4PANTHERPTHR34810DNA-BINDING PROTEIN BIN4coord: 32..252

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000904_piloncontigtig00000904_pilon:54421..55251 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10538.t1Ggra10538.t1Gracilaria gracilis GNS1m malemRNAtig00000904_pilon 54421..55251 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10538.t1 ID=Ggra10538.t1|Name=Ggra10538.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=277bp
MSESSSDDGFFSDSSGKLDLLSVKQNLQSVGDEANLANSSEAHKSTSNAQ
QDSSRDEPAWVLDHSQSRPTDQENRRRVLASLSEDDGDESIIDLVSQEPS
FEVAQKPIIEKKDNSGQESVPKPQEQQKPARAPRSSLPLTVASKIDDSLV
LLQSSDESLDLSGDVGAVGRVKVSEEGLFFDIKGVVYKVTTHATNTACVV
QMVDDEARVTSVMDEVLTLHMDRNLFASDEIIINGNLDDHSDQESMFEED
RRNSEQPVRGKRKKGPASPASKARLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033246BIN4