Ggra10454.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10454.t1
Unique NameGgra10454.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length154
Homology
BLAST of Ggra10454.t1 vs. uniprot
Match: A0A2V3J5U1 (bPH_2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5U1_9FLOR)

HSP 1 Score: 247 bits (630), Expect = 6.120e-82
Identity = 130/155 (83.87%), Postives = 143/155 (92.26%), Query Frame = 0
Query:    1 MSTSPPSKGK--KARRYRPTKNVPAQKTKLEPETTFIETAPSKYELIVPTISILTVIGIIPFIAAVARAAWVRYKITSRRISISSGFQGKDQTEIIYRDIESLKFVRRLGGAADCVISLKDGAKLEIRAVPDFDTIYEYIMEKVDEDAREASGSA 153
            M+   PS GK  KARRYRPTKN+PA K KL+PETTF+ETAPS YELIVPT+SILTVIGIIPFIAAVARAAWVRYK TSRRI+ISSGFQGKDQTEIIYRDI+S+K+VRR+GGAADCVISLKDGAKLEIRAVPDFD++YEYIMEKVD+ A EASGSA
Sbjct:    1 MANPSPSSGKGNKARRYRPTKNIPANKQKLQPETTFLETAPSAYELIVPTLSILTVIGIIPFIAAVARAAWVRYKFTSRRIAISSGFQGKDQTEIIYRDIQSVKYVRRIGGAADCVISLKDGAKLEIRAVPDFDSVYEYIMEKVDDSASEASGSA 155          
BLAST of Ggra10454.t1 vs. uniprot
Match: A0A7S2ZJ46 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZJ46_9RHOD)

HSP 1 Score: 159 bits (401), Expect = 1.020e-46
Identity = 79/132 (59.85%), Postives = 105/132 (79.55%), Query Frame = 0
Query:   21 VPAQKTKLEPETTFIETAPSKYELIVPTISILTVIGIIPFIAAVARAAWVRYKITSRRISISSGFQGKDQTEIIYRDIESLKFVRRL-GGAADCVISLKDGAKLEIRAVPDFDTIYEYIMEKVDEDAREASG 151
            +P +K KL+PE  F++ AP+ +EL++P +S+ T+IGIIPFIAA AR  WVRYKITSRRIS+SSGFQG++  EI+Y D++ +++VRRL G + D V+ L+DGAKLE+RAVP F  IY+YIM KVD D RE SG
Sbjct:   46 MPKEKVKLDPEEVFVDVAPTPFELLIPFLSLPTIIGIIPFIAAAARQLWVRYKITSRRISVSSGFQGQNTVEIVYADVDRVRYVRRLLGESGDMVLELRDGAKLEMRAVPRFQEIYDYIMSKVDADTRERSG 177          
BLAST of Ggra10454.t1 vs. uniprot
Match: A0A7S0T572 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T572_9RHOD)

HSP 1 Score: 159 bits (401), Expect = 1.650e-46
Identity = 80/129 (62.02%), Postives = 104/129 (80.62%), Query Frame = 0
Query:   23 AQKTKLEPETTFIETAPSKYELIVPTISILTVIGIIPFIAAVARAAWVRYKITSRRISISSGFQGKDQTEIIYRDIESLKFVRRLGG-AADCVISLKDGAKLEIRAVPDFDTIYEYIMEKVDEDAREAS 150
            A+K KLEPE  F +  PS  EL+VP ++ILTVIGIIPFIAA AR  WV+Y++TSRRI++  GFQGKD  EI+YRDIE ++++RR+GG AAD VI L+DGAKLE+R+VPDF  IY +I++++ EDARE S
Sbjct:   67 AEKMKLEPEEVFFDGKPSWTELVVPALTILTVIGIIPFIAAAARQVWVKYRVTSRRIAVDGGFQGKDHVEIVYRDIEEIRYIRRMGGSAADMVIFLRDGAKLELRSVPDFKNIYGFILKQLPEDAREKS 195          
BLAST of Ggra10454.t1 vs. uniprot
Match: A0A5J4YNW6 (bPH_2 domain-containing protein n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNW6_PORPP)

HSP 1 Score: 158 bits (399), Expect = 1.930e-46
Identity = 85/140 (60.71%), Postives = 107/140 (76.43%), Query Frame = 0
Query:   12 ARRYRPTKNVPAQ-KTKLEPETTFIETAPSKYELIVPTISILTVIGIIPFIAAVARAAWVRYKITSRRISISSGFQGKDQTEIIYRDIESLKFVRRLGG-AADCVISLKDGAKLEIRAVPDFDTIYEYIMEKVDEDAREA 149
            A +++P     AQ K KLEPE  F E  P+  ELI+P I+ LTVIGIIPFIAA AR  WVRYK+TSRR+SI  GFQGKD  EI+YRD+ES+K+VRR+GG +AD VI LKDGA+LE+R+VPDF  IY +I++++ E  REA
Sbjct:   36 AEKFKPGLGKVAQPKQKLEPEVVFFEGKPAWTELIIPAITTLTVIGIIPFIAAAARQFWVRYKVTSRRVSIDGGFQGKDHVEIVYRDVESMKYVRRMGGGSADLVIFLKDGARLELRSVPDFKNIYNFILDQLPESVREA 175          
BLAST of Ggra10454.t1 vs. uniprot
Match: A0A7S1TKP2 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKP2_9RHOD)

HSP 1 Score: 154 bits (390), Expect = 1.370e-44
Identity = 75/129 (58.14%), Postives = 104/129 (80.62%), Query Frame = 0
Query:   23 AQKTKLEPETTFIETAPSKYELIVPTISILTVIGIIPFIAAVARAAWVRYKITSRRISISSGFQGKDQTEIIYRDIESLKFVRRLGGA-ADCVISLKDGAKLEIRAVPDFDTIYEYIMEKVDEDAREAS 150
            ++K KLEPE  F +  PS  ELIVP +++LTVIGIIPFI+A AR  WV+Y++TSRRI++  GFQGKD  EI+YRD++ ++++RR+GGA AD VI LKDGAKLE+R+VPDF  +Y++I++++  DARE S
Sbjct:   87 SEKLKLEPEEVFFDGKPSWTELIVPALTVLTVIGIIPFISAAARQVWVKYRVTSRRIAVDGGFQGKDHVEIVYRDVDEIRYIRRMGGASADMVIFLKDGAKLELRSVPDFRNVYQFILKQLPADAREKS 215          
BLAST of Ggra10454.t1 vs. uniprot
Match: A0A7S0ZJI6 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJI6_9RHOD)

HSP 1 Score: 154 bits (388), Expect = 2.320e-44
Identity = 79/127 (62.20%), Postives = 101/127 (79.53%), Query Frame = 0
Query:   25 KTKLEPETTFIETAPSKYELIVPTISILTVIGIIPFIAAVARAAWVRYKITSRRISISSGFQGKDQTEIIYRDIESLKFVRRLGGA-ADCVISLKDGAKLEIRAVPDFDTIYEYIMEKVDEDAREAS 150
            K KLEPE    +  P+  ELIVP +++LTVIGIIPFIAAV+R  WVRY+ITSRRI+I  GFQGKD  EI+YRDI+ ++++RR+GG+ AD V  LKDGAKLE+R+VPDF+ IYEYI+ +V E+ RE S
Sbjct:   83 KQKLEPEEVIYDGKPAWTELIVPALTVLTVIGIIPFIAAVSRQFWVRYRITSRRIAIDGGFQGKDHVEIVYRDIDEIRYIRRMGGSSADVVFFLKDGAKLELRSVPDFNRIYEYILTRVPEEVRERS 209          
BLAST of Ggra10454.t1 vs. uniprot
Match: A0A1X6NJB2 (bPH_2 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJB2_PORUM)

HSP 1 Score: 150 bits (378), Expect = 2.310e-43
Identity = 73/124 (58.87%), Postives = 99/124 (79.84%), Query Frame = 0
Query:   28 LEPETTFIETAPSKYELIVPTISILTVIGIIPFIAAVARAAWVRYKITSRRISISSGFQGKDQTEIIYRDIESLKFVRRLGGAA-DCVISLKDGAKLEIRAVPDFDTIYEYIMEKVDEDAREAS 150
            LEPE  F E  PS  E+++PT++ILTV+G+IP+  AVAR  WV+YK T+RRI++ SGF+G D TE++YRDIE ++FVRR GGAA D V+ LKDGA+LE+R++  FD +YEY+M +VDED R+AS
Sbjct:   37 LEPEEVFYEGKPSWVEVVIPTVAILTVVGVIPWAGAVARQLWVKYKFTNRRIAVDSGFRGNDHTEVVYRDIEEVRFVRRFGGAAADMVLLLKDGARLELRSLDRFDELYEYVMGQVDEDTRQAS 160          
BLAST of Ggra10454.t1 vs. uniprot
Match: A0A7J7IHB8 (bPH_2 domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IHB8_9RHOD)

HSP 1 Score: 146 bits (368), Expect = 3.890e-42
Identity = 75/124 (60.48%), Postives = 100/124 (80.65%), Query Frame = 0
Query:   28 LEPETTFIETAPSKYELIVPTISILTVIGIIPFIAAVARAAWVRYKITSRRISISSGFQGKDQTEIIYRDIESLKFVRRLGG-AADCVISLKDGAKLEIRAVPDFDTIYEYIMEKVDEDAREAS 150
            LEPE T  E  PS  EL++P +SILTVIG+IPF AA+AR  WVRY+I++R I + SGF G+++TEI+YRDIE +++VRRLGG +AD VI +K GAKLE+RAVPDFD  Y+++M++V E+ARE S
Sbjct:   19 LEPEVTLYEGPPSWTELLLPGLSILTVIGVIPFSAALARQFWVRYRISNRSIYVRSGFMGREETEIVYRDIEEIRYVRRLGGVSADYVIMVKGGAKLELRAVPDFDKTYDFMMQRVSEEARERS 142          
BLAST of Ggra10454.t1 vs. uniprot
Match: M1USA2 (bPH_2 domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1USA2_CYAM1)

HSP 1 Score: 143 bits (361), Expect = 1.710e-40
Identity = 73/124 (58.87%), Postives = 99/124 (79.84%), Query Frame = 0
Query:   28 LEPETTFIETAPSKYELIVPTISILTVIGIIPFIAAVARAAWVRYKITSRRISISSGFQGKDQTEIIYRDIESLKFVRRLGG-AADCVISLKDGAKLEIRAVPDFDTIYEYIMEKVDEDAREAS 150
            LEPE TF +  PS  EL++P +SILTVIG+IPF AA+AR  WVRY+I++R I + +GF G+D+TE++YRDIE +++VRR GG +AD VI LK GA+LE+RAVPDFD  Y +IM++V E+AR+ S
Sbjct:   64 LEPEQTFYDGPPSWTELLLPGLSILTVIGVIPFAAALARQYWVRYRISNRSIYVRAGFMGRDETEVVYRDIEEVRYVRRFGGISADYVILLKGGARLELRAVPDFDKTYTFIMQRVSEEARKRS 187          
BLAST of Ggra10454.t1 vs. uniprot
Match: W7TZL4 (Eribonuclease p n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZL4_9STRA)

HSP 1 Score: 141 bits (355), Expect = 3.480e-39
Identity = 75/125 (60.00%), Postives = 95/125 (76.00%), Query Frame = 0
Query:   25 KTKLEPETTFIETAPSKYELIVPTISILTVIGIIPFIAAVARAAWVRYKITSRRISISSGFQGKDQTEIIYRDIESLKFV-RRLGGAADCVISLKDGAKLEIRAVPDFDTIYEYIMEKVDEDARE 148
            K KLEPE+ F E AP   E++VP ISILTVIGIIPF ++VAR  WV+YKITSRRIS++SG  GKD TE+IY DIE + +V R  G   D V+ L+DGAKLEIR++P+F  +Y YI  ++D+DARE
Sbjct:   96 KMKLEPESVFFEGAPHWSEVVVPAISILTVIGIIPFASSVARQIWVKYKITSRRISVTSGVGGKDLTEVIYADIERINYVFRAFGTTGDMVLFLRDGAKLEIRSLPNFRDVYNYIRSQLDDDARE 220          
The following BLAST results are available for this feature:
BLAST of Ggra10454.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5U16.120e-8283.87bPH_2 domain-containing protein n=1 Tax=Gracilario... [more]
A0A7S2ZJ461.020e-4659.85Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S0T5721.650e-4662.02Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A5J4YNW61.930e-4660.71bPH_2 domain-containing protein n=2 Tax=Porphyridi... [more]
A0A7S1TKP21.370e-4458.14Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S0ZJI62.320e-4462.20Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A1X6NJB22.310e-4358.87bPH_2 domain-containing protein n=1 Tax=Porphyra u... [more]
A0A7J7IHB83.890e-4260.48bPH_2 domain-containing protein n=1 Tax=Cyanidioco... [more]
M1USA21.710e-4058.87bPH_2 domain-containing protein n=2 Tax=cellular o... [more]
W7TZL43.480e-3960.00Eribonuclease p n=2 Tax=Monodopsidaceae TaxID=4250... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005182Domain of unknown function DUF304PFAMPF03703bPH_2coord: 67..138
e-value: 2.5E-15
score: 56.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR35688NAD(P)-LINKED OXIDOREDUCTASE SUPERFAMILY PROTEINcoord: 14..146
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..153
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..43
NoneNo IPR availableTMHMMTMhelixcoord: 48..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000108_piloncontigtig00000108_pilon:352203..352664 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10454.t1Ggra10454.t1Gracilaria gracilis GNS1m malemRNAtig00000108_pilon 352203..352664 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10454.t1 ID=Ggra10454.t1|Name=Ggra10454.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=154bp
MSTSPPSKGKKARRYRPTKNVPAQKTKLEPETTFIETAPSKYELIVPTIS
ILTVIGIIPFIAAVARAAWVRYKITSRRISISSGFQGKDQTEIIYRDIES
LKFVRRLGGAADCVISLKDGAKLEIRAVPDFDTIYEYIMEKVDEDAREAS
GSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005182DUF304