Ggra10427.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10427.t1
Unique NameGgra10427.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length144
Homology
BLAST of Ggra10427.t1 vs. uniprot
Match: A0A2V3J5N3 (60S ribosomal protein L27 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5N3_9FLOR)

HSP 1 Score: 266 bits (679), Expect = 9.220e-90
Identity = 123/143 (86.01%), Postives = 136/143 (95.10%), Query Frame = 0
Query:    1 MGKFLKPGKIIILLQGRFAGKKAVIIQNQDNGTNKHSYGHCIVAGVEKYPRKVKKGMTKRKIAFRSDLTPFVKVVNYNHIMPTRYTLDIEPIKGGIDIAAFSSPGANADRPEARKDSRVVIKKEFQQRYNAGKNKWFFTPLRF 143
            MGKFLKPGKI+ILLQGR+AGKKAVIIQNQDNGTNKHSYGHCIVAGV KYPRK+KKG++K+KIA RS+LTPF+KV NYNHIMPTRYTLDI+ +KG +D+AAFSSPGANADRPEARK+SRV IK EFQQRYNAGKNKWFFTPLRF
Sbjct:    1 MGKFLKPGKIVILLQGRYAGKKAVIIQNQDNGTNKHSYGHCIVAGVRKYPRKMKKGLSKKKIALRSNLTPFIKVANYNHIMPTRYTLDIDAVKGKVDVAAFSSPGANADRPEARKESRVAIKTEFQQRYNAGKNKWFFTPLRF 143          
BLAST of Ggra10427.t1 vs. uniprot
Match: R7Q674 (60S ribosomal protein L27 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q674_CHOCR)

HSP 1 Score: 241 bits (615), Expect = 5.460e-80
Identity = 111/144 (77.08%), Postives = 131/144 (90.97%), Query Frame = 0
Query:    1 MGKFLKPGKIIILLQGRFAGKKAVIIQNQDNGTNKHSYGHCIVAGVEKYPRKVKKGMTKRKIAFRSDLTPFVKVVNYNHIMPTRYTLDI-EPIKGGIDIAAFSSPGANADRPEARKDSRVVIKKEFQQRYNAGKNKWFFTPLRF 143
            MGKFLKP KI+ILLQG+ AGKKAVI+QN DNGTNKHSYGHCIVAG+EKYPR+VKK M+K+KIA RSD++ FVKVVNYNH+MPTRYTLD+ + +K G+D+AAFSSPGANA+RPEARK+ R ++KKE  QRYNAGKN+WFFTPLRF
Sbjct:    1 MGKFLKPAKIVILLQGKHAGKKAVILQNHDNGTNKHSYGHCIVAGIEKYPRRVKKSMSKKKIALRSDMSVFVKVVNYNHLMPTRYTLDLGDAVKSGLDMAAFSSPGANAERPEARKEGRELVKKELSQRYNAGKNQWFFTPLRF 144          
BLAST of Ggra10427.t1 vs. uniprot
Match: A0A261Y365 (60S ribosomal protein L27 n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y365_9FUNG)

HSP 1 Score: 173 bits (438), Expect = 3.850e-53
Identity = 80/143 (55.94%), Postives = 109/143 (76.22%), Query Frame = 0
Query:    1 MGKFLKPGKIIILLQGRFAGKKAVIIQNQDNGTNKHSYGHCIVAGVEKYPRKVKKGMTKRKIAFRSDLTPFVKVVNYNHIMPTRYTLDIEPIKGGIDIAAFSSPGANADRPEARKDSRVVIKKEFQQRYNAGKNKWFFTPLRF 143
            M KF+KPGK++++LQGR+AGKKAV+I+N D+GT   SYG+ ++AG+E+YP KV + M ++KIA RS + PF+KVVNYNHIMPTRY L++E +KG +   +F  P   + R EA+K     IKK F++RYN+GKNKWFFT L F
Sbjct:    1 MVKFIKPGKVVVVLQGRYAGKKAVVIKNHDDGTKDRSYGYAVIAGIERYPLKVTRSMGQKKIAKRSKVKPFIKVVNYNHIMPTRYALELESLKGVVSNESFKEP---SQREEAKK----AIKKAFEERYNSGKNKWFFTKLNF 136          
BLAST of Ggra10427.t1 vs. uniprot
Match: A0A197JTN3 (60S ribosomal protein L27 n=3 Tax=Mortierellaceae TaxID=4854 RepID=A0A197JTN3_9FUNG)

HSP 1 Score: 169 bits (427), Expect = 1.810e-51
Identity = 77/143 (53.85%), Postives = 107/143 (74.83%), Query Frame = 0
Query:    1 MGKFLKPGKIIILLQGRFAGKKAVIIQNQDNGTNKHSYGHCIVAGVEKYPRKVKKGMTKRKIAFRSDLTPFVKVVNYNHIMPTRYTLDIEPIKGGIDIAAFSSPGANADRPEARKDSRVVIKKEFQQRYNAGKNKWFFTPLRF 143
            M +FLKP K++++L GR+AGKKAVI++N D G+ +  YGH IVAGVE+YP K+ K M K+++A RS + PF+K+VNYNH+MPTRY L++E +K  + + +F  P   + R EA+K     IKK F++RYN+GKNKWFFT LRF
Sbjct:    1 MPRFLKPSKVVVILNGRYAGKKAVIVKNVDEGSKERGYGHAIVAGVERYPLKITKNMGKKRVAKRSKVKPFIKIVNYNHMMPTRYGLELESLKSAVTLDSFKEP---SQREEAKK----AIKKLFEERYNSGKNKWFFTKLRF 136          
BLAST of Ggra10427.t1 vs. uniprot
Match: A0A1Y1WM81 (60S ribosomal protein L27 n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WM81_9FUNG)

HSP 1 Score: 168 bits (426), Expect = 2.580e-51
Identity = 81/143 (56.64%), Postives = 103/143 (72.03%), Query Frame = 0
Query:    1 MGKFLKPGKIIILLQGRFAGKKAVIIQNQDNGTNKHSYGHCIVAGVEKYPRKVKKGMTKRKIAFRSDLTPFVKVVNYNHIMPTRYTLDIEPIKGGIDIAAFSSPGANADRPEARKDSRVVIKKEFQQRYNAGKNKWFFTPLRF 143
            M KFLK GK++I+LQGR+AGKKAVI++N D GT +  YGH IVAG+E+YP KV K M K+K+A RS + PF+KVVNY H+MPTRY+L++E IK  +    FS P   + R  A+K     ++   QQRY AGKNKWFFT LRF
Sbjct:    1 MPKFLKNGKVVIILQGRYAGKKAVIVKNVDEGTKERPYGHAIVAGIERYPLKVTKSMDKKKVASRSHVKPFIKVVNYAHLMPTRYSLELEEIKAAVTAETFSEP---SQRTAAKK----AVRNSLQQRYTAGKNKWFFTKLRF 136          
BLAST of Ggra10427.t1 vs. uniprot
Match: A0A1X2GDZ3 (60S ribosomal protein L27 n=2 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GDZ3_9FUNG)

HSP 1 Score: 168 bits (425), Expect = 3.660e-51
Identity = 79/143 (55.24%), Postives = 102/143 (71.33%), Query Frame = 0
Query:    1 MGKFLKPGKIIILLQGRFAGKKAVIIQNQDNGTNKHSYGHCIVAGVEKYPRKVKKGMTKRKIAFRSDLTPFVKVVNYNHIMPTRYTLDIEPIKGGIDIAAFSSPGANADRPEARKDSRVVIKKEFQQRYNAGKNKWFFTPLRF 143
            M KF+K GK++++LQGR+AGKKAV+++N D GT +  YG  +VAGVE+ P KV + M K+K+A RS + PF+KVVNYNH+MPTRY LD+E IKG I    F  P         R+D++ VIKK FQ+RY  GKNKWFF  LRF
Sbjct:    1 MVKFIKAGKVVVILQGRYAGKKAVVVRNHDEGTKERGYGFAVVAGVERSPLKVTRNMGKKKVAKRSRVKPFIKVVNYNHMMPTRYALDLEQIKGTISADTFKEPSQ-------REDAKKVIKKLFQERYQTGKNKWFFNKLRF 136          
BLAST of Ggra10427.t1 vs. uniprot
Match: A0A367KY20 (60S ribosomal protein L27 n=38 Tax=Opisthokonta TaxID=33154 RepID=A0A367KY20_RHIST)

HSP 1 Score: 167 bits (423), Expect = 7.370e-51
Identity = 79/143 (55.24%), Postives = 102/143 (71.33%), Query Frame = 0
Query:    1 MGKFLKPGKIIILLQGRFAGKKAVIIQNQDNGTNKHSYGHCIVAGVEKYPRKVKKGMTKRKIAFRSDLTPFVKVVNYNHIMPTRYTLDIEPIKGGIDIAAFSSPGANADRPEARKDSRVVIKKEFQQRYNAGKNKWFFTPLRF 143
            M KF+K GK++++LQGR+AGKKAV+++N D GT    YG+ +VAGVE+ P KV K M K+K+A RS + PFVK+VNYNH+MPTRY L++E IKG I    F  P         R DS+ VIKK F++RY  GKNKWFF+ LRF
Sbjct:    1 MVKFIKAGKVVVILQGRYAGKKAVVVRNHDEGTKDRPYGYAVVAGVERSPLKVTKSMGKKKVAKRSKVKPFVKIVNYNHMMPTRYALELEQIKGTISAETFKEP-------TQRVDSKKVIKKLFEERYQTGKNKWFFSKLRF 136          
BLAST of Ggra10427.t1 vs. uniprot
Match: A0A1Y1YZT7 (60S ribosomal protein L27 n=3 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YZT7_9FUNG)

HSP 1 Score: 167 bits (423), Expect = 7.370e-51
Identity = 80/143 (55.94%), Postives = 102/143 (71.33%), Query Frame = 0
Query:    1 MGKFLKPGKIIILLQGRFAGKKAVIIQNQDNGTNKHSYGHCIVAGVEKYPRKVKKGMTKRKIAFRSDLTPFVKVVNYNHIMPTRYTLDIEPIKGGIDIAAFSSPGANADRPEARKDSRVVIKKEFQQRYNAGKNKWFFTPLRF 143
            M KF+KPGK+ I+LQGR+AGKK V+++N D GT + +YGH IVAGVE+YP KV K M K++I+ RS + PF+KVVNYNHIMPTRY L++E IK  +   +F  P         R  S+  IKK F++RY  GKNKWFFT LRF
Sbjct:    1 MVKFIKPGKVAIVLQGRYAGKKVVVVKNFDEGTKERAYGHAIVAGVERYPLKVNKSMGKKRISKRSKVKPFIKVVNYNHIMPTRYGLELEEIKKAVSPESFKEP-------TQRNASKKAIKKLFEERYTTGKNKWFFTKLRF 136          
BLAST of Ggra10427.t1 vs. uniprot
Match: A0A1Y2EVX7 (60S ribosomal protein L27 n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2EVX7_PROLT)

HSP 1 Score: 167 bits (422), Expect = 1.050e-50
Identity = 76/143 (53.15%), Postives = 103/143 (72.03%), Query Frame = 0
Query:    1 MGKFLKPGKIIILLQGRFAGKKAVIIQNQDNGTNKHSYGHCIVAGVEKYPRKVKKGMTKRKIAFRSDLTPFVKVVNYNHIMPTRYTLDIEPIKGGIDIAAFSSPGANADRPEARKDSRVVIKKEFQQRYNAGKNKWFFTPLRF 143
            M KF+KPGK+ I+ +GR+AGKK VI+Q  DNG+  H + H +VAGVE+YP KV + M+ +++A RS + PFVKV+NYNH+MPTRY L++E +KG I    F  P         R+D++  IKK F++RY +GKNKWFFTPLRF
Sbjct:    1 MVKFIKPGKVAIVTRGRYAGKKVVIVQPVDNGSKAHPFAHALVAGVERYPLKVTRSMSAKRMAKRSKVKPFVKVINYNHLMPTRYALELESLKGVISADTFKEPSQ-------REDAKKTIKKSFEERYTSGKNKWFFTPLRF 136          
BLAST of Ggra10427.t1 vs. uniprot
Match: A0A2T9YBI6 (60S ribosomal protein L27 n=1 Tax=Furculomyces boomerangus TaxID=61424 RepID=A0A2T9YBI6_9FUNG)

HSP 1 Score: 166 bits (420), Expect = 2.110e-50
Identity = 79/143 (55.24%), Postives = 103/143 (72.03%), Query Frame = 0
Query:    1 MGKFLKPGKIIILLQGRFAGKKAVIIQNQDNGTNKHSYGHCIVAGVEKYPRKVKKGMTKRKIAFRSDLTPFVKVVNYNHIMPTRYTLDIEPIKGGIDIAAFSSPGANADRPEARKDSRVVIKKEFQQRYNAGKNKWFFTPLRF 143
            M KFLKPGK++I+LQGR+AGKKAVI++N D GT   +YG+C+VAG+E+YP KV K M  +K+A RS + PF+KVVNYNHIMPTRY  +++ IK  +++  F  P     R  A+K     IKK  Q +Y AGKNKWFF+ LRF
Sbjct:    1 MTKFLKPGKVVIVLQGRYAGKKAVIVKNYDEGTKDRNYGYCVVAGIERYPLKVTKAMDAKKVARRSRVKPFIKVVNYNHIMPTRYGFELDDIKENLNLNMFKEP---TQRAAAKK----AIKKSLQAKYTAGKNKWFFSKLRF 136          
The following BLAST results are available for this feature:
BLAST of Ggra10427.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5N39.220e-9086.0160S ribosomal protein L27 n=1 Tax=Gracilariopsis c... [more]
R7Q6745.460e-8077.0860S ribosomal protein L27 n=1 Tax=Chondrus crispus... [more]
A0A261Y3653.850e-5355.9460S ribosomal protein L27 n=1 Tax=Bifiguratus adel... [more]
A0A197JTN31.810e-5153.8560S ribosomal protein L27 n=3 Tax=Mortierellaceae ... [more]
A0A1Y1WM812.580e-5156.6460S ribosomal protein L27 n=1 Tax=Linderina pennis... [more]
A0A1X2GDZ33.660e-5155.2460S ribosomal protein L27 n=2 Tax=Hesseltinella ve... [more]
A0A367KY207.370e-5155.2460S ribosomal protein L27 n=38 Tax=Opisthokonta Ta... [more]
A0A1Y1YZT77.370e-5155.9460S ribosomal protein L27 n=3 Tax=Basidiobolus mer... [more]
A0A1Y2EVX71.050e-5053.1560S ribosomal protein L27 n=1 Tax=Protomyces lactu... [more]
A0A2T9YBI62.110e-5055.2460S ribosomal protein L27 n=1 Tax=Furculomyces boo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038655Ribosomal protein L27e superfamilyGENE3D2.30.30.770coord: 1..143
e-value: 7.9E-53
score: 180.2
IPR001141Ribosomal protein L27ePFAMPF01777Ribosomal_L27ecoord: 52..143
e-value: 1.4E-27
score: 95.8
IPR001141Ribosomal protein L27ePANTHERPTHR1049760S RIBOSOMAL PROTEIN L27coord: 1..143
NoneNo IPR availablePANTHERPTHR10497:SF060S RIBOSOMAL PROTEIN L27coord: 1..143
IPR018262Ribosomal protein L27e, conserved sitePROSITEPS01107RIBOSOMAL_L27Ecoord: 132..143
IPR041991Eukaryotic Ribosomal Protein L27, KOW domainCDDcd06090KOW_RPL27coord: 6..88
e-value: 2.73896E-43
score: 135.774
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 3..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000108_piloncontigtig00000108_pilon:291717..292303 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10427.t1Ggra10427.t1Gracilaria gracilis GNS1m malemRNAtig00000108_pilon 291717..292303 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10427.t1 ID=Ggra10427.t1|Name=Ggra10427.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=144bp
MGKFLKPGKIIILLQGRFAGKKAVIIQNQDNGTNKHSYGHCIVAGVEKYP
RKVKKGMTKRKIAFRSDLTPFVKVVNYNHIMPTRYTLDIEPIKGGIDIAA
FSSPGANADRPEARKDSRVVIKKEFQQRYNAGKNKWFFTPLRF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038655L27e_sf
IPR001141Ribosomal_L27e
IPR018262Ribosomal_L27e_CS
IPR041991KOW_RPL27
IPR008991Translation_prot_SH3-like_sf