Ggra10403.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10403.t1
Unique NameGgra10403.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length178
Homology
BLAST of Ggra10403.t1 vs. uniprot
Match: A0A2V3J5P3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5P3_9FLOR)

HSP 1 Score: 282 bits (722), Expect = 1.150e-94
Identity = 138/177 (77.97%), Postives = 151/177 (85.31%), Query Frame = 0
Query:    1 MQLPVDVPAQLVLAANPAWLTKVADTIATLNLPKPVVEWGHPAMMAFLVLGMGAPGAYFGWAGRLNADKKAGVGQKKLHENVMLGFFLLAFLGGVGGTLSVAMQGYDIWESPHFISAVVVLLMLTINSVLAYSGFTIGTDGTAKGRLQGRKIHAYFGLATMTAFLVHAVLGALILLG 177
            M L  ++P  L LAANP WLTKVAD IATLNLPK +VEWGHP MMAF+VLGMG PGAY GW GRLN DK+AGV QK+LHEN+M+ FFLLAFLGG GGTLSVAMQGYDIW+SPHFIS+ VVL ML +NS LAYSGFTIG DGT KGRLQGRK+HAYFG+ATM AFLVH  LGALILLG
Sbjct:   39 MALDPNLPTHL-LAANPVWLTKVADAIATLNLPKWLVEWGHPGMMAFMVLGMGTPGAYIGWQGRLNPDKRAGVAQKRLHENIMIAFFLLAFLGGTGGTLSVAMQGYDIWQSPHFISSAVVLAMLAVNSTLAYSGFTIGNDGTPKGRLQGRKLHAYFGIATMLAFLVHGALGALILLG 214          
BLAST of Ggra10403.t1 vs. uniprot
Match: A0A1X6PAT0 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PAT0_PORUM)

HSP 1 Score: 199 bits (505), Expect = 1.850e-61
Identity = 98/159 (61.64%), Postives = 113/159 (71.07%), Query Frame = 0
Query:   13 LAANPAWLTKVADTIATLNLPKPVVEWGHPAMMAFLVLGMGAPGAYFGWAGRLNADKKAGVGQKKLHENVMLGFFLLAFLGGVGGTLSVAMQGYDIWESPHFISAVVVLLMLTINSVLAYSGFTIGTDGTAKGRLQGRKIHAYFGLATMTAFLVHAVLG 171
            LA NPAWL KV D + TL  P  VV++GHP +MAF++LGMG PG   GW GR N DKKAGV QK+LHEN+ML F+LLAF G  GG LS  MQG DI  SPH  +A VVL +LT N+V+AYSGFTIG   T +GR QGR +HAY G  T  A LVHA LG
Sbjct:   64 LATNPAWLVKVGDAVGTLPFPPAVVKYGHPGLMAFMILGMGLPGGVIGWLGRTNEDKKAGVKQKQLHENIMLAFWLLAFAGATGGVLSTVMQGKDILTSPHAKTAGVVLALLTANAVVAYSGFTIGGGATPEGRKQGRTLHAYLGAGTGIALLVHAGLG 222          
BLAST of Ggra10403.t1 vs. uniprot
Match: A0A5J4YY69 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YY69_PORPP)

HSP 1 Score: 178 bits (451), Expect = 1.710e-53
Identity = 90/164 (54.88%), Postives = 115/164 (70.12%), Query Frame = 0
Query:   13 LAANPAWLTKVADTIATLNLPKPVVEWGHPAMMAFLVLGMGAPGAYFGWAGRLNADKKAGVGQKKLHENVMLGFFLLAFLGGVGGTLSVAMQGYDIWESPHFISAVVVLLMLTINSVLAYSGFTIGTDGTAKGRLQGRKIHAYFGLATMTAFLVHAVLGALILL 176
            +A NP WL  +A   +   +P+PV ++GHP MM+ +V  MG  GAY GWAGRLN DKKAGV QK+LHE +M+ F+LLAF+G  GG LS  +QGYDI ES H  SA +VL +LT+ +++AYSGF      T K ++QGRK+HAY G ATM AFLVHA  G  +LL
Sbjct:   57 IAENPKWLETLAKGFS--GVPEPVTKYGHPVMMSIMVAAMGGGGAYLGWAGRLNPDKKAGVKQKQLHEQLMVAFWLLAFMGASGGILSTVLQGYDILESEHAKSAGLVLALLTLEAIIAYSGF----GSTPKAKIQGRKVHAYIGAATMAAFLVHAGFGIQMLL 214          
BLAST of Ggra10403.t1 vs. uniprot
Match: A0A7S3EPF5 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EPF5_9RHOD)

HSP 1 Score: 174 bits (441), Expect = 4.120e-52
Identity = 94/174 (54.02%), Postives = 119/174 (68.39%), Query Frame = 0
Query:    1 MQLPVDVPAQ-LVLAANPAWLTKVADTIATLNLPKPVVEWGHPAMMAFLVLGMGAPGAYFGWAGRLNADKKAGVGQKKLHENVMLGFFLLAFLGGVGGTLSVAMQGYDIW--ESPHFISAVVVLLMLTINSVLAYSGFTIGTDGTAKGRLQGRKIHAYFGLATMTAFLVHAVLG 171
            M L VD  +Q  +  ANP  + KVAD + TL LP  V++WGHPAMMAF+V GMG PGA FGW GRL   K++ V  K LHE VM+ F+LLAF G +GG+LS+A QG++IW  + PHF+SA+ VL +LT N+V AYSGF      T   +L+GR +HAY G  TM  F+VH VLG
Sbjct:   28 MSLDVDSVSQSFIHLANPVVIQKVADYVGTLGLPPFVIKWGHPAMMAFMVAGMGMPGAAFGWIGRLGKGKES-VKMKNLHEQVMVAFWLLAFAGALGGSLSLAGQGHEIWTLQDPHFVSALAVLGLLTANAVYAYSGFG---GSTPAEKLKGRTVHAYLGALTMGVFVVHGVLG 197          
BLAST of Ggra10403.t1 vs. uniprot
Match: M2VVN4 (Cytochrome b561 domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VVN4_GALSU)

HSP 1 Score: 167 bits (423), Expect = 3.980e-49
Identity = 83/164 (50.61%), Postives = 109/164 (66.46%), Query Frame = 0
Query:   12 VLAANPAWLTKVADTIATLNLPKPVVEWGHPAMMAFLVLGMGAPGAYFGWAGRLNADKKAGVGQKKLHENVMLGFFLLAFLGGVGGTLSVAMQGYDIWESPHFISAVVVLLMLTINSVLAYSGFTIGTDGTAKGRLQGRKIHAYFGLATMTAFLVHAVLGALIL 175
            V ++NP  + ++AD   TL +P+ V ++GHP MM  ++  +G   AY+GW GRLN DKK GV QK  H N+   F+LLAF G  GGTLSVAMQGY +W+S H +SAV VLL LT+N+ +A+SGF      T   R+ GRK+HAY G  TM   LVH++LG  IL
Sbjct:   62 VTSSNPFVIQRIADYFKTLGIPENVEKYGHPVMMGIMIAFLGGATAYYGWMGRLNPDKKKGVQQKSFHSNLATVFWLLAFAGASGGTLSVAMQGYPVWKSTHSLSAVAVLLGLTVNAWIAFSGF----GSTPTKRMSGRKVHAYLGTVTMVLLLVHSILGVSIL 221          
BLAST of Ggra10403.t1 vs. uniprot
Match: M1VMD0 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VMD0_CYAM1)

HSP 1 Score: 167 bits (423), Expect = 6.740e-49
Identity = 83/165 (50.30%), Postives = 113/165 (68.48%), Query Frame = 0
Query:   16 NPAWLTKVADTIATLNLPKPVVEWGHPAMMAFLVLGMGAPGAYFGWAGRLNADKKAGVGQKKLHENVMLGFFLLAFLGGVGGTLSVAMQGYDIWESPHFISAVVVLLMLTINSVLAYSGFTIGTDG---TAKGRLQGRKIHAYFGLATMTAFLVHAVLGALILLG 177
            NP  + ++AD   TL++P+PVVE+GHP MM  +V  MG  GAY GWAGRLN DK+AGV QK+ H  VM  F LLAFLG  GG LSVAMQG+ + +S H +SAV+VL++L+ N + A +GF  G+       +   QGR++HAY G+A + A L+HA LG  +++G
Sbjct:   77 NPLVIQRIADYFKTLSIPEPVVEYGHPVMMTIMVAAMGLGGAYLGWAGRLNPDKRAGVKQKQTHATVMGAFTLLAFLGASGGMLSVAMQGFPVGQSAHALSAVLVLVLLSFNGIYAGTGFGAGSKRGREATEAAAQGRRVHAYLGVAIVAALLLHAFLGLQMIIG 241          
BLAST of Ggra10403.t1 vs. uniprot
Match: A0A7S1XGV4 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XGV4_9RHOD)

HSP 1 Score: 138 bits (347), Expect = 9.460e-38
Identity = 76/171 (44.44%), Postives = 102/171 (59.65%), Query Frame = 0
Query:    8 PAQLVL-AANPAWLTKVADTIATLNLPKPVVEWGHPAMMAFLVLGMGAPGAYFGWAGRLNADKKAGVGQKKLHENVMLGFFLLAFLGGVGGTLSVAMQGYDIWESPHFISAVVVLLMLTINSVLAYSGFTIGTDGTAKGRLQGRKIHAYFGLATMTAFLVHAVLGALILLG 177
            PA +++ AANP  L + AD       PKP++E GHP MM  ++  +G  G   GW GRLN +KK GV QK+ H  +M  F +LAF G  GGTLSV +QG DIW+S HF +A ++L ML IN ++A +GF     G A+ R +GR  HA+FG A +   + H   G   L G
Sbjct:   52 PASMMMTAANPEILERAADLFRAT--PKPIMELGHPVMMGIMIATLGLAGVSLGWKGRLNENKKEGVEQKQFHAKLMSLFTVLAFAGASGGTLSVVLQGGDIWQSTHFQTACLMLGMLVINGLIAGAGF----GGNAESRKKGRTFHAWFGAAIVAVVIGHVATGISFLQG 216          
BLAST of Ggra10403.t1 vs. uniprot
Match: A0A7J7IRG4 (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IRG4_9RHOD)

HSP 1 Score: 120 bits (300), Expect = 1.180e-31
Identity = 65/128 (50.78%), Postives = 82/128 (64.06%), Query Frame = 0
Query:   44 MMAFLVLGMGAPGAYFGWAGRLNADKKAGVGQKKLHENVMLGFFLLAFLGGVGGTLSVAMQGYDIWESPHFISAVVVLLMLTINSVLAYSGFTIGTDG---TAKGRLQGRKIHAYFGLATMTAFLVHA 168
            MM  +V  MG  GAY GWAGRLN DK+AGV QK+ H  +M  F LLAFLG  GG LSVAMQG+ + +S H +SAV+VL++LT N + A +GF  G        +   QGR++HAY G     AF+V A
Sbjct:    1 MMTIMVAAMGLGGAYLGWAGRLNPDKRAGVKQKQTHATIMGAFTLLAFLGASGGMLSVAMQGFPVGQSAHSLSAVLVLVLLTFNGIYAGTGFGAGNKRGKEATEAIAQGRRLHAYLG-----AFIVGA 123          
BLAST of Ggra10403.t1 vs. uniprot
Match: B7K9R5 (Uncharacterized protein n=1 Tax=Gloeothece citriformis (strain PCC 7424) TaxID=65393 RepID=B7K9R5_GLOC7)

HSP 1 Score: 117 bits (293), Expect = 2.660e-30
Identity = 64/152 (42.11%), Postives = 84/152 (55.26%), Query Frame = 0
Query:   20 LTKVADTIATLNLPKPVVEWGHPAMMAFLVLGMGAPGAYFGWAGRLNADKKAGVGQKKLHENVMLGFFLLAFLGGVGGTLSVAMQGYDIWESPHFISAVVVLLMLTINSVLAYSGFTIGTDGTAKGRLQGRKIHAYFGLATMTAFLVHAVLG 171
            L  +A    +LN+P+P+  WGHP MMA ++L MG    Y GW GRL++D +       +H  +M   F+   LG VGG LS+ MQ   I ESPHF +A  VL +L  N  +A +GF    D   K  L+G  IHAY GLA     LVH + G
Sbjct:    9 LEPIAAWFRSLNIPEPITHWGHPVMMATVILVMGGYAVYAGWRGRLSSDTEVRAKNLGMHRQLMPWVFIFLALGSVGGVLSLVMQQKPITESPHFWTAGAVLFLLASNGAIAATGF----DSQQKELLRG--IHAYLGLAIAILLLVHGIFG 154          
BLAST of Ggra10403.t1 vs. uniprot
Match: DUF4079 domain-containing protein n=1 Tax=Mastigocladopsis repens TaxID=221287 RepID=UPI0002DE6235 (DUF4079 domain-containing protein n=1 Tax=Mastigocladopsis repens TaxID=221287 RepID=UPI0002DE6235)

HSP 1 Score: 112 bits (280), Expect = 2.280e-28
Identity = 61/152 (40.13%), Postives = 81/152 (53.29%), Query Frame = 0
Query:   20 LTKVADTIATLNLPKPVVEWGHPAMMAFLVLGMGAPGAYFGWAGRLNADKKAGVGQKKLHENVMLGFFLLAFLGGVGGTLSVAMQGYDIWESPHFISAVVVLLMLTINSVLAYSGFTIGTDGTAKGRLQGRKIHAYFGLATMTAFLVHAVLG 171
            L  +A    +L +P P+V WGHP MMA +V  MG+     GW GRL  DK+  +  +  H  +    FL   LG  GG LS+ MQ   I ESPHF +  +VLL+L INS +A+SGF       A  +   R +HAY G   +    +HA LG
Sbjct:    8 LEPIAAWFRSLGVPYPIVHWGHPVMMAIVVFVMGSFVGLVGWRGRLVEDKEVAIKSRSEHRKLAPWMFLFMALGYTGGVLSLVMQHQPILESPHFWTGSIVLLVLLINSAIAFSGF-------AGNKAALRTVHAYLGSTALCLLFLHAALG 152          
The following BLAST results are available for this feature:
BLAST of Ggra10403.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5P31.150e-9477.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6PAT01.850e-6161.64Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YY691.710e-5354.88Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S3EPF54.120e-5254.02Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
M2VVN43.980e-4950.61Cytochrome b561 domain-containing protein n=1 Tax=... [more]
M1VMD06.740e-4950.30Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A7S1XGV49.460e-3844.44Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7J7IRG41.180e-3150.78Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
B7K9R52.660e-3042.11Uncharacterized protein n=1 Tax=Gloeothece citrifo... [more]
DUF4079 domain-containing protein n=1 Tax=Mastigocladopsis repens TaxID=221287 RepID=UPI0002DE62352.280e-2840.13DUF4079 domain-containing protein n=1 Tax=Mastigoc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.120.1770coord: 5..176
e-value: 1.3E-6
score: 29.6
NoneNo IPR availablePANTHERPTHR36738EXPRESSED PROTEINcoord: 21..172
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 155..176
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..102
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 136..154
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 177..177
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..81
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 103..113
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..135
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 154..176
NoneNo IPR availableTMHMMTMhelixcoord: 113..135
NoneNo IPR availableTMHMMTMhelixcoord: 81..103
IPR025067Protein of unknown function DUF4079PFAMPF13301DUF4079coord: 38..176
e-value: 7.3E-14
score: 52.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000108_piloncontigtig00000108_pilon:234486..235019 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10403.t1Ggra10403.t1Gracilaria gracilis GNS1m malemRNAtig00000108_pilon 234486..235019 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10403.t1 ID=Ggra10403.t1|Name=Ggra10403.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=178bp
MQLPVDVPAQLVLAANPAWLTKVADTIATLNLPKPVVEWGHPAMMAFLVL
GMGAPGAYFGWAGRLNADKKAGVGQKKLHENVMLGFFLLAFLGGVGGTLS
VAMQGYDIWESPHFISAVVVLLMLTINSVLAYSGFTIGTDGTAKGRLQGR
KIHAYFGLATMTAFLVHAVLGALILLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025067DUF4079