Ggra10289.t1 (polypeptide) Gracilaria gracilis GNS1m male
Overview
Homology
BLAST of Ggra10289.t1 vs. uniprot
Match: A0A2V3ILC2 (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILC2_9FLOR) HSP 1 Score: 337 bits (863), Expect = 2.120e-114 Identity = 168/214 (78.50%), Postives = 187/214 (87.38%), Query Frame = 0 Query: 1 MVASSSNMDVEETEDLTGVMWHDKNWLSYFPLTKEHVLEYFSHSQFYDERCNNHQIKLQRLDPKLLETMAGIEYQVTADPAPGLFIITKFLRSLRPPNLEPLAMYYVLEGDVYQAPSVHAILSSRILQSLRHLRKAFETMQNATSVSSQGKYSWEPPPVSMHEREDNSNAQNGAEVLSSAEKSAIDSMLFDVLERNRQIHATHAEKMSA-QGEK 213 MVASSSNM VEETEDLTGVMWHDKNWLS+FPL+K++VLEYFSHSQFYDERCNN QIKLQ LD KLLE+MAGIEYQVTAD APGLF+ITKFLRSL P +LEPLAMYYVL+GDVYQAPSVHAILSSRILQ L HLRKAFETMQNA++VS QG+Y WEP PV ++ERED + G E+LS AE+S +D MLF+VLERNRQIH H EKM A QG+K Sbjct: 1 MVASSSNMAVEETEDLTGVMWHDKNWLSFFPLSKDNVLEYFSHSQFYDERCNNQQIKLQMLDNKLLESMAGIEYQVTADVAPGLFVITKFLRSLSPASLEPLAMYYVLDGDVYQAPSVHAILSSRILQCLHHLRKAFETMQNASTVSVQGQYWWEPSPVGVNEREDVGEGEGGTELLSGAERSGVDGMLFEVLERNRQIHGAHVEKMCASQGDK 214
BLAST of Ggra10289.t1 vs. uniprot
Match: F4Q2D8 (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q2D8_CAVFA) HSP 1 Score: 139 bits (351), Expect = 8.080e-37 Identity = 68/142 (47.89%), Postives = 93/142 (65.49%), Query Frame = 0 Query: 12 ETEDLTGVMWHDKNWLSYFPLTKEHVLEYFSHSQFYDERCNNHQIKLQRLDPKLLETMAGIEYQVTADPAPGLFIITKFLRSLRPPNLEPLAMYYVLEGDVYQAPSVHAILSSRILQSLRHLRKAFETMQNATSVSSQGKYS 153 E EDLT +MW D WL FPL + VL YFS SQFYD++CNN +K+QRLDP L+TM GIEYQV P LF+I + R P +++ +YY++ G +YQAP + A+L+SR+ QSL HLR+AF+ + + + YS Sbjct: 19 EVEDLTQIMWRDPLWLQMFPLNQMTVLTYFSMSQFYDKQCNNEILKMQRLDPSALKTMVGIEYQVINYQEPSLFLIARQYRE-SPGDVKVQTLYYIINGSIYQAPDLKAVLTSRLTQSLYHLRQAFDKIGSIVNWDIVNGYS 159
BLAST of Ggra10289.t1 vs. uniprot
Match: MED6 (Putative mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=MED6_DICDI) HSP 1 Score: 133 bits (335), Expect = 2.860e-34 Identity = 65/165 (39.39%), Postives = 100/165 (60.61%), Query Frame = 0 Query: 1 MVASSSNMDV-EETEDLTGVMWHDKNWLSYFPLTKEHVLEYFSHSQFYDERCNNHQIKLQRLDPKLLETMAGIEYQVTADPAPGLFIITKFLRSLRPPNLEPLAMYYVLEGDVYQAPSVHAILSSRILQSLRHLRKAFETMQNATSVSSQGKYSWEPPPVSMHER 164 M++ +S + EE DLT VMW D WL +PL + +L+YFS+SQFYD+ CNN Q+K+QRLD L+ M G+EY++ P F+I K R + P ++ +YYV+ G++YQAP +H + SR+ QS+ HL +AF ++ + + YS P + E+ Sbjct: 50 MISDTSTPRILEEEPDLTQVMWRDPLWLQMYPLNPQTILQYFSYSQFYDKNCNNEQLKMQRLDLSALKNMDGLEYELIKFVEPSFFLIAKQTR-ISPTDVLINTLYYVINGNIYQAPELHVVFKSRVSQSISHLSEAFNSISSIVNWDIVNGYSLNLDPSNQQEK 213
BLAST of Ggra10289.t1 vs. uniprot
Match: A0A7S3EG92 (Mediator of RNA polymerase II transcription subunit 6 n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EG92_9RHOD) HSP 1 Score: 132 bits (333), Expect = 4.540e-34 Identity = 79/214 (36.92%), Postives = 114/214 (53.27%), Query Frame = 0 Query: 14 EDLTGVMWHDKNWLSYFPLTKEHVLEYFSHSQFYDERCNNHQIKLQRLDPKLLETMAGIEYQVTADPA--PGLFIITKFLRSLRPPNLEPLAMYYVLEGDVYQAPSVHAILSSRILQSLRHLRKAFETMQNATSV-------------------------SSQGK-YSWEPPPVSMHEREDNSNAQNGAEVLSSAEKSAIDSMLFDVLERNRQI 199 E LT + W+DK WLSYFPL K+ VLEYF+ S FY+ C N Q K+QRL+ E + GI Y+V D P LF+I K R+ + LA YY++ G Y++P H++L++RI+QS+ HLR AF+ +Q S QG YSW+P S + D+ + A V E+ +D +L+ +LERNR++ Sbjct: 4 ESLTSLSWNDKVWLSYFPLDKDTVLEYFARSPFYNRSCLNEQYKMQRLEISAFENVPGILYEVVHDLTNEPLLFVIAKLERAENL-TVRTLAYYYIMNGVAYESPKAHSVLTTRIVQSMYHLRNAFDALQEKVGSHTCLLLRIVIPRRKPPDIQCSVQIPSEQGDWYSWKPSYGSSSDAGDDKDESEAAIV----ERQTVDRLLYGILERNRRV 212
BLAST of Ggra10289.t1 vs. uniprot
Match: F0ZNV8 (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZNV8_DICPU) HSP 1 Score: 132 bits (332), Expect = 9.210e-34 Identity = 66/156 (42.31%), Postives = 95/156 (60.90%), Query Frame = 0 Query: 10 VEETEDLTGVMWHDKNWLSYFPLTKEHVLEYFSHSQFYDERCNNHQIKLQRLDPKLLETMAGIEYQVTADPAPGLFIITKFLRSLRPPNLEPLAMYYVLEGDVYQAPSVHAILSSRILQSLRHLRKAFETMQNATSVSSQGKYSWEPPPVSMHERE 165 +EE D T VMW D WL FPL + VL YFS+SQFYD+ CNN +K+QRLDP L+TM G+EY+V P ++I K R + P ++ +YYV+ G++YQAP + + +SRI QSL HL +AF + + + YS+ P + E++ Sbjct: 67 LEEEPDFTQVMWRDPVWLQMFPLNQHTVLTYFSYSQFYDKNCNNETLKMQRLDPAALKTMEGLEYEVAKFVEPSFYLIAKQNR-ISPSDVIIQQLYYVINGNIYQAPDLRQVFTSRISQSLFHLSEAFNKISSIINWDIINGYSFNFDPSNQQEKQ 221
BLAST of Ggra10289.t1 vs. uniprot
Match: M2XHR9 (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XHR9_GALSU) HSP 1 Score: 124 bits (310), Expect = 1.980e-31 Identity = 59/134 (44.03%), Postives = 89/134 (66.42%), Query Frame = 0 Query: 14 EDLTGVMWHDKNWLSYFPLTKEHVLEYFSHSQFYDERCNNHQIKLQRLDPKLLETMAGIEYQVTADPAPGLFIITKFLRSLRPPNLEPLAMYYVLEGDVYQAPSVHAILSSRILQSLRHLRKAFETMQNATSVS 147 EDL + W D +L+ FPLT+E VL+YFS S FYD CNN QI++Q+LDP++L + G EY VT P F++ K R R + L ++Y+++G VYQAPS+ ++L SR+ +S H+ ++FE++Q A+ S Sbjct: 10 EDLAHLSWRDNWFLANFPLTQETVLDYFSGSPFYDPSCNNEQIRMQKLDPEVLYNLVGTEYMVTNQQEPVFFVVEKVYRYNRE-ETKTLQVFYIIQGTVYQAPSLRSLLLSRLSESFFHISESFESLQQASLFS 142
BLAST of Ggra10289.t1 vs. uniprot
Match: A0A2G5BCP3 (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BCP3_COERN) HSP 1 Score: 113 bits (282), Expect = 1.570e-27 Identity = 61/148 (41.22%), Postives = 87/148 (58.78%), Query Frame = 0 Query: 14 EDLTGVMWHDKNWLSYFP-LTKEHVLEYFSHSQFYDERCNNHQIKLQRLDPKL------LETMAGIEYQVTADPAPGLFIITKFLRSLRPPNLEPLAMYYVLEGDVYQAPSVHAILSSRILQSLRHLRKAFETMQNATSVSSQGKYSW 154 +DLT + W W+ F L E+VLEYFS S F+D NN +K+Q L L+ M G+E+ VT P LFIITKF RS P + P+A YY+L+G+ Y+APS+H+I+S+R+L S++ + AFE ++ YSW Sbjct: 3 KDLTAIEWRSDQWIYQFGGLRPENVLEYFSQSPFWDPSSNNAVLKMQTQFNALQQGSYDLKNMVGVEFAVTHQEPPMLFIITKFRRS-SPTKVTPIAAYYILDGNAYEAPSLHSIVSTRMLSSIKRVENAFEIARSHAVFHPSVGYSW 149
BLAST of Ggra10289.t1 vs. uniprot
Match: A0A6P8HXC8 (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HXC8_ACTTE) HSP 1 Score: 116 bits (290), Expect = 1.680e-27 Identity = 71/220 (32.27%), Postives = 117/220 (53.18%), Query Frame = 0 Query: 8 MDVEETEDLTGVMWHDKNWLSYFPLTKEHVLEYFSH--SQFYDERCNNHQIKLQRLDPKLLETMAGIEYQVTADPAPGLFIITKFLRSLRPPNLEPLAMYYVLEGDVYQAPSVHAILSSRILQSLRHLRKAFETMQNATSVSSQGKYSWEPPPVSMHEREDNSNAQNGAEVLSSAEKSAIDSMLFDVLER-------NRQIHATHAEKMSAQGEKREDEG 218 M + TE+ GV WHD W+ L +VLEYFS + FYD CNN +K+QRLDP L++MAGIEY+V P LF+I K R ++ P+A YY+L G VYQAP + ++++SR+L +L + AF+ + + Y W+ + + + ++ S ++ ++ +L ++ +R Q++ T A +AQ ++ E+ G Sbjct: 1 MAADTTENELGVSWHDSAWIPI--LNPANVLEYFSQRTNPFYDRTCNNEVVKMQRLDPSALQSMAGIEYEVIHVQDPILFVIRKQQRHSST-HVTPIADYYILAGIVYQAPDLGSVINSRMLSALHNFESAFKEAVSYSRYHQSKGYWWQFKDSQKNPDSKTTTEKKTSQASSLFQREGVNQLLGELSKRFPPSLIKASQVNTTTAGTATAQSKEAEEPG 217
BLAST of Ggra10289.t1 vs. uniprot
Match: A0A1Y1HUV0 (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HUV0_KLENI) HSP 1 Score: 111 bits (278), Expect = 2.140e-26 Identity = 59/124 (47.58%), Postives = 79/124 (63.71%), Query Frame = 0 Query: 15 DLTGVMWHDKNWLSYFPLTKEHVLEYFSHSQFYDERCNNHQIKLQRLDPKLLETMA-GIEYQVTADPAPGLFIITKFLRSLRPPNLEPLAMYYVLEGDVYQAPSVHAILSSRILQSLRHLRKAF 137 DLTGV++ D WL FPL + VL+YF+ S FYD CNN ++K Q D LL TM G EY V + P L++I K LR + P + PLA YYVL+G +YQAP + A+L SR +SL +++ F Sbjct: 7 DLTGVLFSDPLWLQSFPLNRATVLDYFALSPFYDASCNNEKLKAQGKDLSLLSTMPYGPEYVVISAQEPNLYVIRKQLR-VSPDKMVPLAAYYVLDGSIYQAPHLQAVLGSRAERSLYYVQSGF 129
BLAST of Ggra10289.t1 vs. uniprot
Match: A0A7S4C2Y7 (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C2Y7_CHRCT) HSP 1 Score: 109 bits (272), Expect = 5.440e-26 Identity = 65/151 (43.05%), Postives = 88/151 (58.28%), Query Frame = 0 Query: 16 LTGVMWHDKNWLSYFPLTKEHVLEYFSHSQFYDERCNNHQIKLQR-LDPKLLETM----AGIEYQV--------TADP-APGLFIITKFLRSLRP---PNLEPLAMYYVLEGDVYQAPSVHAILSSRILQSLRHLRKAFETMQNATSVSSQ 149 LT + W DK WL FPL + VL+YFSHSQFYD C N Q+K+QR L + +E M +G+EY + +AD A L++I K +R+ RP P L P YYVL+G Y+ PSVHA+LS R+++ L AFE + A S + Sbjct: 10 LTNISWEDKAWLQAFPLNQTTVLDYFSHSQFYDRTCINEQVKMQRGLTAEDMEDMVVRMSGVEYVLHHAHEVPPSADSTAHSLYVILKQVRTYRPSSTPQLTPDRYYYVLDGVAYEVPSVHAVLSERLMRLGWLLNSAFEGLAAAASAEQK 160 The following BLAST results are available for this feature:
BLAST of Ggra10289.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra10289.t1 ID=Ggra10289.t1|Name=Ggra10289.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=259bpback to top |