Ggra10288.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10288.t1
Unique NameGgra10288.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length287
Homology
BLAST of Ggra10288.t1 vs. uniprot
Match: A0A2V3ILF7 (Nudix hydrolase domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILF7_9FLOR)

HSP 1 Score: 379 bits (972), Expect = 2.850e-130
Identity = 188/253 (74.31%), Postives = 216/253 (85.38%), Query Frame = 0
Query:   34 MKSSESPRALRALVLSFLIAAAALSASFVLFSSIPAHPDTTTTANLLQALRQRETAYQLVSDNVVYDRYARVYSREVRFPDGKQFAFDVWGRVWKNDSFAVVTVVPFDRKTTTFTLIREYNIAHARYVYSFPQGQLERAKHKSVHMGAAAELEEEAQLQCDEWVNLLNGDEGRGAPQDKYQRETVHYFLCTAAHHVDNAADVDDEENIEVVHGVTPSQLRELAAAGALQSNNIAAALMGIDKLRRLRLLPWSA 286
            MK S+S   LRAL+L     A AL+      S+ P HPDTTTT+NLL+AL+QR+T+Y+++SD VVYDRYARVYSR++RFPDG+QF FDVWGRVWKNDSFAVVTVVPFDR T TFTL+REYNIAHARYVYSFPQGQ ER+KH+S+  GAAAELEEEA LQCDEWVNLL+ D GRGAPQDKYQRETVHYFLCTAAHHV +AAD D+EENIEVV GVT +QLR+L AAGALQSNNIAAALM + +L  LRLLP++A
Sbjct:    1 MKGSDSSPPLRALLLXXXXXAVALTLYLSPLSTTPPHPDTTTTSNLLKALQQRQTSYKVLSDKVVYDRYARVYSRQIRFPDGRQFDFDVWGRVWKNDSFAVVTVVPFDRPTKTFTLVREYNIAHARYVYSFPQGQYERSKHRSIRHGAAAELEEEAHLQCDEWVNLLHNDLGRGAPQDKYQRETVHYFLCTAAHHVQHAADRDEEENIEVVRGVTATQLRQLVAAGALQSNNIAAALMALHELSTLRLLPYTA 253          
BLAST of Ggra10288.t1 vs. uniprot
Match: A0A7S2ZFG6 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZFG6_9RHOD)

HSP 1 Score: 110 bits (275), Expect = 1.840e-25
Identity = 62/172 (36.05%), Postives = 93/172 (54.07%), Query Frame = 0
Query:   90 YQLVSDNVVYDRYARVYSREVRFPDGKQFAFDVWGRVWKNDSFAVVTVVPFDRKTTTFTLIREYNIAHARYVYSFPQGQLERAKHKSVHMGAAAELEEEAQLQCDEWVNLLNGDEGRGAPQDKYQRETVHYFLCTAAHHVDNAADVDDEENIEVVHGVTPSQLRELAAAGAL 261
            + ++ + V + RY  VY R +R+P+GK+ +FDV+G       F  V V P+D +T T TL+REY       ++ FP G  +  KHKS+   A +EL EEA L    +  +L   E  G  QDKY +   H FL       +N    D+EE I++V GVT  +L+++ A G +
Sbjct:   40 FSILDEKVSFQRYQTVYERLIRYPNGKRVSFDVFGN--PRSDFKSVFVFPYDTRTKTVTLLREYIPGINEVMWGFPAGGFDPKKHKSLEDAARSELSEEAFLTGGSYFPML---ESGGVSQDKYSKNMFHMFLVLNPVEDENPLPRDEEEYIQIVKGVTLPRLQKILAQGGM 206          
BLAST of Ggra10288.t1 vs. uniprot
Match: A0A7S2RZZ7 (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RZZ7_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 5.210e-20
Identity = 63/193 (32.64%), Postives = 100/193 (51.81%), Query Frame = 0
Query:   88 TAYQLVSDNVVYDRYARVYSREVRFPDGKQFAFDVWGRVWKNDSFAVVTVVPFDRKTTTFTLIREYNIAHARYVYSFPQGQLERAKHKSVHMGAAA-ELEEEAQLQCDEWVNLLNGDEGRGAPQDKYQRETVHYFLCTAAHHVDNAADVDDEENIEVVHGVTPSQLRELAAAGALQSNNIAAALMGIDKLRRL 279
            + Y+++S+ VVY+R+ +V  R+V  P G    +DV  +  K    A++    +D  T T T++REYN    + +     G +E  KH S  + AA  ELEEE  L    W  L     G     DKY +  V  +L   AH +DN   +D+EE+IE+V GVT  +++ +  +G +      A+L+ + KL+ L
Sbjct:   24 SGYKILSEKVVYERWRKVIQRKVLMPKGLVVDYDVVDQ--KGAGAAII--FAWDSSTKTATIVREYNPGCHQVLGGLAAGLIEDDKHGSDPLIAARHELEEECHLGGGTWYQLTKP--GVAIAMDKYVQTRVTPYLVIDAHKIDNPRPLDEEEDIEIVGGVTVDEIKNMIESGDMNLVGSWASLLALQKLKEL 210          
BLAST of Ggra10288.t1 vs. uniprot
Match: A0A448Z503 (Nudix hydrolase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z503_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 3.980e-19
Identity = 59/197 (29.95%), Postives = 94/197 (47.72%), Query Frame = 0
Query:   87 ETAYQLVSDNVVYDRYARVYSREVRFPDGKQFAFDVWGRVWKNDSFAVVTVVPFDRKTTTFTLIREYNIAHARYVYSFPQGQLERAKHKSVHMGAAAELEEEAQLQCDEWVNLLNGDEGRGAPQDKYQRETVHYFLCTAAHHVDNAADVDDEENIEVVHGVTPSQLRELAAAGALQSNNIAAALMGIDKLRRLRLLP 283
            +  ++++ +N+VY  +  +  R VR  +GK   FD+ G          V +  +D K+ T T+IREY  A  R ++    G +E     +  + A  ELEEE  L+   W+ LL     + A  DKY   T+  +L       +N   +DDEE+IE+V GVT  ++ E    G +       +L+ I KL+ L   P
Sbjct:   96 DKTFEILEENIVYSGWRTINKRIVRMRNGKVVDFDLVG---VKTGEGAVLIFAWDSKSKTATMIREYMPASHRVLWGLAAGLIEDKHEHNTELAARHELEEECHLKGGRWIPLLT----QPAAMDKYSTTTIQCYLVIDPEPEENPKPLDDEEDIEIVSGVTIPEILEFVRNGEMNLVGGYGSLLAIQKLQELGEYP 285          
BLAST of Ggra10288.t1 vs. uniprot
Match: A0A7S1ZSI2 (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZSI2_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.330e-18
Identity = 63/198 (31.82%), Postives = 91/198 (45.96%), Query Frame = 0
Query:   90 YQLVSDNVVYDRYARVYSREVRFPDGKQFAFDVWGRVWKNDSFAVVTVVPFDRKTTTFTLIREYNIAHARYVYSFPQGQLE---RAKHKSVHMGAAAELEEEAQLQCDEWVNLLNGDEGRGA-----PQDKYQRETVHYFLCTAAHHVDNAADVDDEENIEVVHGVTPSQLRELAAAGALQSNNIAAALMGIDKLRRL 279
            Y+L+ + VV+ R+  + SR VR P+G    +DV  +         V +  ++ +T T TL+REYN    R +Y    G +E   +  H      A  ELEEE  L    W  L        +     P DKY    +  +L   A HV N    DDEE+IE+V  VT  ++  L  +G +      A L+ I+KLR L
Sbjct:   98 YELLKEEVVFQRWRSILSRVVRMPNGNVVDYDVVDQ----KGVGAVVIFVWNSQTKTATLVREYNPGCHRILYGVAAGLIEDDAKHSHGDPKQAAIMELEEECHLSGGTWHCLTTPSSSSSSLPTSVPMDKYAVTNITPYLVIDASHVTNPKPCDDEEDIEIVRNVTIDEVLRLIRSGEMNLVGGWACLLAIEKLRDL 291          
BLAST of Ggra10288.t1 vs. uniprot
Match: A0A7S0QQ35 (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QQ35_9CRYP)

HSP 1 Score: 89.7 bits (221), Expect = 2.430e-18
Identity = 61/174 (35.06%), Postives = 86/174 (49.43%), Query Frame = 0
Query:  113 PDGKQFAFDVWGRVWKNDSFAVVTVVPFDRKTTTFTLIREYNIAHARYVYSFPQGQLERAKHKSVHMGAAAELEEEAQLQCDEWVNLLNGDEGRGAPQDKYQRETVHYFLCTAAHHVDNAADV-----DDEENIEVVHGVTPSQLRELAAAGALQSNNIAAALMGIDKLRRLRL 281
            P G+   + V G      +F+ V V P+D +T + TLIREY       + + P G  E A+H S+   A  EL EEA+L    WV L       G  QDKY R  +H FL      +D A D      D+EE+I V HGV   ++    AAG + +    AAL+ +++LR + L
Sbjct:    2 PPGRLVEWHVTGS--PRGNFSTVVVFPYDTRTRSCTLIREYCPGSNSVLSALPGGMFEPARHASLLHAARDELNEEAELTGGTWVELAPA----GILQDKYSRNRLHAFLA-----IDCAVDPAPRPRDEEEHITVEHGVAVEEVMRRIAAGDMVAPGAMAALLAVERLREMGL 164          
BLAST of Ggra10288.t1 vs. uniprot
Match: A0A7S1BIB0 (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIB0_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 5.320e-18
Identity = 64/197 (32.49%), Postives = 97/197 (49.24%), Query Frame = 0
Query:   90 YQLVSDNVVYDRYARVYSREVRFPDGKQFAFDVWGRVWKNDSFAVVTVVPFDRKTTTFTLIREYNIAHARYVYSFPQGQLERA-KHKSVHMGAAA--ELEEEAQLQCDEWVNLLNGDEGRGAPQDKYQRETVHYFLCTAAHHVDNAAD----VDDEENIEVVHGVTPSQLRELAAAGALQSNNIAAALMGIDKLRRL 279
            Y+ +SD + Y R+  +  R+V+ P+G    FDV  +  K      V V  +D +T T TLI+EYN    R +     G +E   KH       A   ELEEE  L+   W +LL  D     P DKY       +L   A  +D+A++    +DDEE+IE++HGV+  ++ E+   G +        L+ ++KLR L
Sbjct:  112 YEHISDILGYSRWRSIIQRKVKMPNGNVVDFDVVDQKGKG----AVVVFAWDTRTKTATLIKEYNPGCMRIITGVAAGIIESGDKHDGGDPMVAGRFELEEECHLRNGRWYSLLEDD--TTVPHDKYSVTEFSAYLVLDADTIDSASEDVRALDDEEDIEIIHGVSVPKILEMIRKGEMNLVGGWTCLLALEKLREL 302          
BLAST of Ggra10288.t1 vs. uniprot
Match: A0A1E7ER69 (Nudix hydrolase domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ER69_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 4.220e-17
Identity = 61/201 (30.35%), Postives = 98/201 (48.76%), Query Frame = 0
Query:   85 QRETAYQLVSDNVVYDRYARVYSREVRFPDGKQFAFDVWGRVWKNDSFAVVTVVPFDRKTTTFTLIREYNIAHARYVYSFPQGQLERAKHKS--VHMGAAAELEEEAQLQCDEWVNLLNGDEGRGAPQDKYQRETVHYFLCTAAHHVDNAADVDDEENIEVVHGVTPSQLRELAAAGALQSNNIAAALMGIDKLRRLRLLP 283
            + +  ++++ +  VY  +  +  R+VR  + K   FD+ G V   DS   V +  +D K+ T TLIREY  A  R ++    G +E  KH +    + A  ELEEE  L+  +W+ LL+    +    DKY   T+  +L       DN   +D+EE+IE++ GVT  ++      G +        L+ I+KLR L   P
Sbjct:   43 ENKNNFEIIDEKTVYSGWRTIVQRKVRMRNNKVVDFDLVG-VKTGDS--AVLIFAWDTKSKTATLIREYMPASNRILWGLAAGLVEE-KHDNHNTELAARHELEEECHLKNGKWIPLLH----QPTAMDKYSTTTIQCYLVLDPEKEDNPKALDEEEDIEIIPGVTIPEILRWVNNGEMNLVGGFGCLLAIEKLRELGEYP 235          
BLAST of Ggra10288.t1 vs. uniprot
Match: A0A1S8VVP4 (Uncharacterized protein n=2 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VVP4_9FUNG)

HSP 1 Score: 88.2 bits (217), Expect = 9.410e-17
Identity = 63/199 (31.66%), Postives = 97/199 (48.74%), Query Frame = 0
Query:   80 LQALRQRETAYQLVSDNVVYDRYARVYSREVRFPDGKQFAFDVWGRVWKNDSFAVVTVVPFDRKTTTFTLIREYNIAHARYVYSFPQGQLERAKHKSVHMGAAAELEEEAQLQCDEWVNLLNGDEGRGAPQDKYQRETVHYFLCTAAHHVDNAADVDDEENIEVVHGVTPSQLRELAAAGALQSNNIAAALMGIDKLRR 278
            L+A  QR+    +V++   Y R+  V+SR V+FPDG++  +DV G    + +FA  TV P++ +T    LI EY        Y+   G  +  KH  +   A  EL EEA+L   +W+ L+  D   G P+ K+ R     FL   A         D EE IE +  VT  +L+ +   G +   ++   LM +D LR+
Sbjct:   83 LKAEVQRQDPLPIVAEQQSYKRFLTVWSRRVKFPDGREVDWDVAGHGTLSPAFA--TVFPYNTETKKVRLIVEYAQGPNLMSYTLAAGGFDPRKHADIQETAICELSEEAKLCNGKWIRLIP-DAHNGIPELKWSRNRFVPFLVINAEEDITPLARDAEECIETLD-VTLDELQHMILNGLVMLPSVQTTLMAMDWLRK 277          
BLAST of Ggra10288.t1 vs. uniprot
Match: B8CE31 (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CE31_THAPS)

HSP 1 Score: 87.8 bits (216), Expect = 1.010e-16
Identity = 63/215 (29.30%), Postives = 96/215 (44.65%), Query Frame = 0
Query:   90 YQLVSDNVVYDRYARVYSREVRFP-------------DGKQFAFDVWGRVWKNDSFAVVTVVPFDRKTTTFTLIREYNIAHARYVYSFPQGQLERAKHKSVH--------MGAAAELEEEAQLQCDEWVNLLNGDEGRGAPQDKYQRETVHYFLCTAAHHVDNAADVDDEENIEVVHGVTPSQLRELAAAGALQSNNIAAALMGIDKLRRLRLLP 283
            Y +V+D V Y  + +V  R V  P               K   FDV  +   +D+   V +  ++  + T T++REY     R +     G +E AKH S          + A  ELEEE  L   +W  L   + G   P DKY    +  +L    HHV N   +DDEE+IE++ GVT  ++R++   G +       AL+ ++KLR    +P
Sbjct:   56 YTIVNDEVRYSGWRKVIRRTVSSPIRHHPHHYDTYDRQHKTIEFDVIDQ--NHDTNGAVIIFAWNSTSKTATIVREYMPGCHRVLGGLAAGLVENAKHASGDGEIEEDSLVAARFELEEECHLAGGKWFRLT--ENGVSIPMDKYVVTEITPYLVIDPHHVPNPRPLDDEEDIEIITGVTVKEIRQMIREGDMNLVGCFGALLALEKLREFGEIP 266          
The following BLAST results are available for this feature:
BLAST of Ggra10288.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A2V3ILF72.850e-13074.31Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A7S2ZFG61.840e-2536.05Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2RZZ75.210e-2032.64Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A448Z5033.980e-1929.95Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A7S1ZSI22.330e-1831.82Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S0QQ352.430e-1835.06Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S1BIB05.320e-1832.49Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A1E7ER694.220e-1730.35Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A1S8VVP49.410e-1731.66Uncharacterized protein n=2 Tax=Batrachochytrium s... [more]
B8CE311.010e-1629.30Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.79.10Nucleoside Triphosphate Pyrophosphohydrolasecoord: 87..280
e-value: 1.4E-25
score: 92.0
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 65..286
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..64
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..41
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
IPR000086NUDIX hydrolase domainPFAMPF00293NUDIXcoord: 134..255
e-value: 5.8E-7
score: 29.6
IPR015797NUDIX hydrolase-like domain superfamilySUPERFAMILY55811Nudixcoord: 97..271

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:389076..389936 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10288.t1Ggra10288.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 389076..389936 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10288.t1 ID=Ggra10288.t1|Name=Ggra10288.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=287bp
MAAPALRRDMTVKRSPAHELLPVASLNRASRRSMKSSESPRALRALVLSF
LIAAAALSASFVLFSSIPAHPDTTTTANLLQALRQRETAYQLVSDNVVYD
RYARVYSREVRFPDGKQFAFDVWGRVWKNDSFAVVTVVPFDRKTTTFTLI
REYNIAHARYVYSFPQGQLERAKHKSVHMGAAAELEEEAQLQCDEWVNLL
NGDEGRGAPQDKYQRETVHYFLCTAAHHVDNAADVDDEENIEVVHGVTPS
QLRELAAAGALQSNNIAAALMGIDKLRRLRLLPWSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000086NUDIX_hydrolase_dom
IPR015797NUDIX_hydrolase-like_dom_sf