|
Homology
BLAST of Ggra10216.t1 vs. uniprot
Match: A0A2V3ILG6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILG6_9FLOR) HSP 1 Score: 248 bits (632), Expect = 1.570e-72 Identity = 168/485 (34.64%), Postives = 261/485 (53.81%), Query Frame = 0
Query: 1 MRLSNWRWLGPVPAAFVLQAVFGLQFANGVFASFLDDAVLTQALGLAALFVSLGITAFGVLLYYASDHSKYHA--VPRAVAVFGSVAVAAQLFVSYGLVNHSRFIVYLASVLQGTGAGCIYVVSIVVVQDWVPESPALVTGLSLLFGGAGSLFGIYAFQALVHAMDGAIAAMAVASLAAGMLSVTASMFIERPPERWCPVAEIFDPHTTMTLKDAHHERRAAGNDPQMRLVEEQSVCYSAIVEFGDDDLLPHKQKQSESFGRLSCSDILVDPAFALVFVCVFVAAGPGYGFVLSYPLMLHSLFDMALIDANQMLCYATFFGVVGRLALGLAIDIISSSCSNNHSSANIRGSKLSNIFIVVLQTVGLALMPLAIRAECAWLFHAAVFAVFVAFNGGAVVAACLARDVFAAENSTLAFALLGVAVGVARALFSVLLAACAGVAG-------------KGAYDWYIGWSVVVSVAGVVGSYFIEASKC 470
+ L ++R++ PVPA F+LQA+FGL +A GVF + + T A+GLA+ FVS+GIT GV + + S HA P A+ GSV ++ Q ++ L + ++Y ASVL GTG GCIYV S+ V+Q WVPES +TG+ +L G AGSLFGIY ++ALV A+ I AMA + LS A+ +++PP W P ++ RA G++ L+ + ++A PH +S DIL D +F ++ V GPG+G VL+Y ML +F A+ +AN + + TF G+ GRL G+ +D + S S+ + G K +N+ ++++Q A +P IRA + F AA +++ F+GG VVAACL VF N++LAF+L+ +++G FS ++A C+ Y+ ++ +V+ S+AG+V ++FI S+C
Sbjct: 7 LLLRDYRYVVPVPACFLLQALFGLLYAQGVFVALVHTPQYTLAIGLASFFVSVGITLSGVSMSKLASSSPSHAQSAPVYAALAGSVGLSGQTVLALALALDNVHLLYAASVLYGTGCGCIYVASVDVLQAWVPESRGFITGVGMLCGAAGSLFGIYIYRALVAALGAPIPAMAFVGAVSAALSFAAAPMLKKPPAGWHPARDL----------------RAGGDEENAPLL----ITHAAQRALHSPPSAPHP-------AVISVRDILRDRSFYMLVVAFAATVGPGFGLVLAYQTMLIDMFGAAISEANNLFFWITFSGLAGRLLAGIGVDALESDVG---SAPRLTGGKRTNMLLLLVQIAATASLPFFIRANMLYAFTAACALIYITFSGGPVVAACLVGAVFDQVNASLAFSLVAISIGAGDMFFSWVVAMCSESTAYPRVLHDRLPRFHASDYNLFLWCTVIWSLAGLVATHFI--SRC 459
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR036259 | MFS transporter superfamily | GENE3D | 1.20.1250.20 | MFS general substrate transporter like domains | coord: 236..464 e-value: 7.3E-6 score: 26.9 |
IPR036259 | MFS transporter superfamily | GENE3D | 1.20.1250.20 | MFS general substrate transporter like domains | coord: 2..197 e-value: 1.1E-6 score: 30.2 |
IPR036259 | MFS transporter superfamily | SUPERFAMILY | 103473 | MFS general substrate transporter | coord: 27..465 |
IPR011701 | Major facilitator superfamily | PFAM | PF07690 | MFS_1 | coord: 41..398 e-value: 4.2E-17 score: 62.1 |
None | No IPR available | PANTHER | PTHR11360 | MONOCARBOXYLATE TRANSPORTER | coord: 6..435 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 189..265 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 161..165 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 351..371 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 126..136 |
None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE | Signal Peptide | coord: 1..32 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 97..101 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 77..96 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 166..188 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 289..307 |
None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_N_REGION | Signal peptide N-region | coord: 1..13 |
None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_H_REGION | Signal peptide H-region | coord: 14..24 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 66..76 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 331..350 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 42..65 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 446..465 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 266..288 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 466..486 |
None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_C_REGION | Signal peptide C-region | coord: 25..32 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 308..330 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 372..376 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 137..160 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 441..445 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 401..411 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 377..400 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 102..125 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 33..41 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 412..440 |
None | No IPR available | TMHMM | TMhelix | | coord: 377..399 |
None | No IPR available | TMHMM | TMhelix | | coord: 103..125 |
None | No IPR available | TMHMM | TMhelix | | coord: 5..27 |
None | No IPR available | TMHMM | TMhelix | | coord: 42..64 |
None | No IPR available | TMHMM | TMhelix | | coord: 443..465 |
None | No IPR available | TMHMM | TMhelix | | coord: 77..99 |
None | No IPR available | TMHMM | TMhelix | | coord: 411..433 |
None | No IPR available | TMHMM | TMhelix | | coord: 166..188 |
None | No IPR available | TMHMM | TMhelix | | coord: 351..373 |
None | No IPR available | TMHMM | TMhelix | | coord: 134..156 |
None | No IPR available | TMHMM | TMhelix | | coord: 271..293 |
None | No IPR available | TMHMM | TMhelix | | coord: 308..330 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra10216.t1 ID=Ggra10216.t1|Name=Ggra10216.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=487bp MRLSNWRWLGPVPAAFVLQAVFGLQFANGVFASFLDDAVLTQALGLAALF VSLGITAFGVLLYYASDHSKYHAVPRAVAVFGSVAVAAQLFVSYGLVNHS RFIVYLASVLQGTGAGCIYVVSIVVVQDWVPESPALVTGLSLLFGGAGSL FGIYAFQALVHAMDGAIAAMAVASLAAGMLSVTASMFIERPPERWCPVAE IFDPHTTMTLKDAHHERRAAGNDPQMRLVEEQSVCYSAIVEFGDDDLLPH KQKQSESFGRLSCSDILVDPAFALVFVCVFVAAGPGYGFVLSYPLMLHSL FDMALIDANQMLCYATFFGVVGRLALGLAIDIISSSCSNNHSSANIRGSK LSNIFIVVLQTVGLALMPLAIRAECAWLFHAAVFAVFVAFNGGAVVAACL ARDVFAAENSTLAFALLGVAVGVARALFSVLLAACAGVAGKGAYDWYIGW SVVVSVAGVVGSYFIEASKCVDVDGGNNRVFTDLQV* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
|