Ggra10195.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10195.t1
Unique NameGgra10195.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length855
Homology
BLAST of Ggra10195.t1 vs. uniprot
Match: A0A2V3ILG0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILG0_9FLOR)

HSP 1 Score: 457 bits (1175), Expect = 1.510e-149
Identity = 247/468 (52.78%), Postives = 306/468 (65.38%), Query Frame = 0
Query:  389 MGATDCYTERSPKQASDLNGNSCTVQLQPESLSKARDELLCHLLPNPPPLTLISSSSCAECVSHHLLFEDICRHSTVQHLKPISITLHPSPSSSPPDDINSTLHQKAGEGAQLFFISFANAALVHVLATSSWVSRSKKNKKVLSRISLVIAMLPEDKYSSP-SYDSWLLRMEHSERTVDASSSGEFLLPSESAAIMLYGAVCGMAAATIGSDLKTTSGMNPFVMPRGVLAVLRRFAQAASNILNGSEHMQQLLDEEEQQVDDEIYTLRRHALVHTLSCGCVMFPYASNPSASVPKCVPPPAIHIRILRAMKLQPNEAEQWWES-RVDTCEVNYLRQSYLHHLRGADMTASIPAHLSYLQLFHAHRPSNALYALLDQVSQSSPRDWELREAIEWVAKAFRASEACVKERMCRDGPGDQHDVFERELAFQVFGRLALFRNRNEVVRKFVSRLELTAGATRRDTKGVVEDF 854
            M AT  Y+       +     S +     +    AR+ LL HLLP  P LTL+ SSS AECV+HHLLF     H ++QHL P  +TLH  PS+SPP DI   L        QL FISFA+A  V  L+    + R KK ++  S IS V+A+LP +K          LLR++ SE     S SG+FLLPSESAA+MLYG VCGMAAA    +      + PFVMP  VLAVLRRF  AAS      + +QQLLDEE  +V+D+++TL RHAL H L C CV+FPY  NPS SVPKC PPPA+H R+LRA+ L P+  E+WW S   + CE++YL  SYLHHLRGA  TAS+ AHLSY QL H+HRPS AL+ L  Q+      DWE++EAIEW+AK FRASE C+++R+C +   +Q  VFERELAFQVFGRLALFRNRNEVVRKFV+ LE++AG TRR  KGV+E+F
Sbjct:    1 MSATGGYSPFKSTTGTSEGITSLSPHSHIDQFKTARNALLKHLLPKLPNLTLLRSSSSAECVAHHLLFGKTYSHFSLQHLHPQFVTLHAVPSASPPVDIEPILKHIQASKTQLVFISFASAPFVRSLSAFLEL-RPKKGRRASSNISFVVALLPNEKPPPRLQVQHSLLRIDDSEYESSFSGSGDFLLPSESAAVMLYGVVCGMAAALRDEEPHNNPSLQPFVMPMKVLAVLRRFTHAASRTTTDEKELQQLLDEERHKVEDDLFTLSRHALAHNLPCACVVFPYVGNPSKSVPKCTPPPALHARVLRALGLAPHSVEEWWCSPSTNPCELHYLGHSYLHHLRGAKATASVSAHLSYPQLLHSHRPSVALHLLHAQMCALPLWDWEMKEAIEWLAKTFRASEVCIEKRLCIEDADNQQAVFERELAFQVFGRLALFRNRNEVVRKFVAGLEISAGPTRRQEKGVLEEF 467          
BLAST of Ggra10195.t1 vs. uniprot
Match: A0A2V3ILF3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILF3_9FLOR)

HSP 1 Score: 290 bits (743), Expect = 7.410e-88
Identity = 142/226 (62.83%), Postives = 169/226 (74.78%), Query Frame = 0
Query:   54 YWSSLSNTLSELSEYLNGSQTLPTSAELQKAGRFDLDSALRRHGWGRISQATGLPLASVARPRSLHLVACTPSPPLRMRPYMYWRDFEHLQDALRPHIRNNGMPTARELIDANQSEIIRAIRIHGGWKAVAHRMGVRPSSKPDWSDLSVVQEEVRQAMQRANASDNELPNVSIIRNFGTRGLLHAIRTHHGGVTQIVRTMYKPKVKYQPVSRKPRGYWTKERLESE 279
            YW SLSNTLSEL+ YL+GS TLPT+ EL+ AGR DL  ALRRHGW  ++  TGL LAS+ARPRS+HL ACTPSPPLRMRPYMYWR+F++LQ  L P+I+N G+PTA++L+ A +SE+IRAI IHGGWK VA RM VRPSSKPDWSDLSVV   VR A Q A  SD  LP V ++R +GTRGLL AIRT HGG++ I R M   +    P  RKPR      RLE++
Sbjct:   52 YWCSLSNTLSELARYLDGSTTLPTARELEAAGRSDLAGALRRHGWAYVADKTGLQLASIARPRSIHLAACTPSPPLRMRPYMYWRNFDNLQAQLEPYIQNGGLPTAKQLLQAGRSELIRAISIHGGWKPVAKRMNVRPSSKPDWSDLSVVLRHVRLAAQTAGLSDAHLPGVPVLRRYGTRGLLSAIRTRHGGLSNIARIMSSSETPSPPTLRKPRVTGLSTRLETK 277          
BLAST of Ggra10195.t1 vs. uniprot
Match: A0A2V3IU40 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU40_9FLOR)

HSP 1 Score: 114 bits (284), Expect = 3.650e-26
Identity = 59/116 (50.86%), Postives = 74/116 (63.79%), Query Frame = 0
Query:  591 MAAATIGSDLKTTSGMNPFVMPRGVLAVLRRFAQAASNILNGSEHMQQLLDEEEQQVDDEIYTLRRHALVHTLSCGCVMFPYASNPSASVPKCVPPPAIHIRILRAMKLQPNEAEQ 706
            MAAA        T    PFV+   VL  LRRF  AASN +   + +QQLLD++ Q+V+D  +TL RHAL H L CGC++ PY  NPS SVPKC  P A+H R+LRA+ L PN AE+
Sbjct:    1 MAAAFRHEGSHNTPISQPFVVTIEVLTGLRRFTHAASNTMTDEKELQQLLDKQRQKVEDGPFTLSRHALAHDLVCGCMVVPYFDNPSKSVPKCTTPSAMHARVLRAIGLDPNGAEE 116          
BLAST of Ggra10195.t1 vs. uniprot
Match: A0A7J7IQ12 (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IQ12_9RHOD)

HSP 1 Score: 91.3 bits (225), Expect = 5.650e-17
Identity = 61/180 (33.89%), Postives = 92/180 (51.11%), Query Frame = 0
Query:   75 LPTSAELQKAG--RFDLDSALRRHG-WGRISQATGLPLASVARPRSLHLVACTPSPPLRMRPYMYWRDFEHLQDALRPHIRNNG-----MPTARELIDANQSEIIRAIRIHGGWKAVAHRMGVRPSSKPD--WSDLSVVQEEVRQAMQRANASDNELPNVSIIRNFGTRGLLHAIRTHHG 244
            LP+  E   A   R DL   +R HG W  ++    L   SVARPRSL +         RM P  +W+ FE+L+  L   I  +      MPTAR+L+  N+S++IRAIR HGG+  VA R+ ++   KP+  W D      E+++ +   +   N +P   ++ + G  GL +A+  H G
Sbjct:   18 LPSEREFVSARFPRADLLYPIRLHGGWEAVAAKLNLKPTSVARPRSLFVTFAVNLRRGRMMPPNFWKKFENLEKELNDFIATHCEERSLMPTARQLLSHNRSDLIRAIRKHGGFPKVAERLRLKIHRKPNGFWDDEQRTFVELKKFIVEHSLPLNLVPTYKVMHSLGASGLANAVARHGG 197          
BLAST of Ggra10195.t1 vs. uniprot
Match: M1UVL6 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UVL6_CYAM1)

HSP 1 Score: 86.3 bits (212), Expect = 8.480e-15
Identity = 61/201 (30.35%), Postives = 99/201 (49.25%), Query Frame = 0
Query:   54 YWSSLSNTLSELSEYL--NGSQTL---PTSAELQKAG--RFDLDSALRRHG-WGRISQATGLPLASVARPRSLHLVACTPSPPLRMRPYMYWRDFEHLQDALRPHIRNN-----GMPTARELIDANQSEIIRAIRIHGGWKAVAHRMGVRPSSKPD--WSDLSVVQEEVRQAMQRANASDNELPNVSIIRNFGTRGLLHAI 239
            YW   +N   E+ E+L  NG   L   P+  +   A   R DL   +R HG W  ++    L  A V++PRSL++         RM P+ YW+DF++L   L+  I  +      MPTA +L   ++S++IRAIR HGG+  VA ++G++   +P+  W+D      E++  +       +  P    ++ FG   L  A+
Sbjct:   47 YWKDAANLEKEVREFLRLNGWDNLNQLPSEQQFISASFPRPDLLYPIRLHGGWQAVAAKLNLKPACVSQPRSLYVTFAVDLRRGRMMPHNYWKDFDNLAKELQSFIAEHLEAKDTMPTAGQLAAHHRSDLIRAIRKHGGFPKVAEQLGLKAHRRPNGYWNDKRRTLVELKTFIAAHRLPPDRAPTYRTMKRFGASTLAAAV 247          
BLAST of Ggra10195.t1 vs. uniprot
Match: A0A7S1TE73 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TE73_9RHOD)

HSP 1 Score: 62.4 bits (150), Expect = 3.120e-6
Identity = 53/189 (28.04%), Postives = 88/189 (46.56%), Query Frame = 0
Query:   59 SNTLSELSEYLNGSQTLPTSAELQKAGRFDLDSALRRHGWGRISQATGLPLASVARPRSLHLVACTPSPPLRMRPYMYWRDFEHLQDALRPHIRNNGMPTARELIDANQSEIIRAIRIHGGWKAVAHRMGVRPSSKP--DWSDLSVVQEEVRQAM-QRANASDNELPNVSIIRNFGTRGLLHAIRTHHG 244
            S+  +E+S      + +PT  EL+KA RFDL  A+RRHG   +          V +  SL        P L  R        E +    +   ++  +PT  +LI   +++++ A+R  GG+ A A R+G++ S +P  +W    VV+EE+R  +          LP+   +   G   L++AI+ H G
Sbjct:   28 SSVKTEMSGKELERRRMPTQKELEKAKRFDLMGAIRRHGGTHV----------VGKRCSLDTQRQAKKPWLITRKSDLTILREQVLQIAQELGKDGFVPTYADLIKLKRTDVLNAVRAMGGFHAAAKRLGLK-SRRPRRNWKSAEVVEEEIRNVIISHPFRPSLTLPSRRQLLQHGRGDLVNAIQLHGG 205          
The following BLAST results are available for this feature:
BLAST of Ggra10195.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3ILG01.510e-14952.78Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ILF37.410e-8862.83Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IU403.650e-2650.86Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7J7IQ125.650e-1733.89Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M1UVL68.480e-1530.35Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A7S1TE733.120e-628.04Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 200..220
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..500
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 501..521
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 522..854

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:65648..68616 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10195.t1Ggra10195.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 65648..68616 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10195.t1 ID=Ggra10195.t1|Name=Ggra10195.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=855bp
MSSLAFVSISAFFVSPATHQRQRAPLVLCTAKPKEPTRGKQAQSKRPGKR
RYRYWSSLSNTLSELSEYLNGSQTLPTSAELQKAGRFDLDSALRRHGWGR
ISQATGLPLASVARPRSLHLVACTPSPPLRMRPYMYWRDFEHLQDALRPH
IRNNGMPTARELIDANQSEIIRAIRIHGGWKAVAHRMGVRPSSKPDWSDL
SVVQEEVRQAMQRANASDNELPNVSIIRNFGTRGLLHAIRTHHGGVTQIV
RTMYKPKVKYQPVSRKPRGYWTKERLESEVIQCAKSLSDERTNEPLYMPT
AAQFKRIGRQRDLNSFSSQMLTCVNTDEKLGGLVSFYGIGNPFWIVFETH
PRTGALGNNLMIIPVLPFNAPVRLWNSEGQFISRSFASMGATDCYTERSP
KQASDLNGNSCTVQLQPESLSKARDELLCHLLPNPPPLTLISSSSCAECV
SHHLLFEDICRHSTVQHLKPISITLHPSPSSSPPDDINSTLHQKAGEGAQ
LFFISFANAALVHVLATSSWVSRSKKNKKVLSRISLVIAMLPEDKYSSPS
YDSWLLRMEHSERTVDASSSGEFLLPSESAAIMLYGAVCGMAAATIGSDL
KTTSGMNPFVMPRGVLAVLRRFAQAASNILNGSEHMQQLLDEEEQQVDDE
IYTLRRHALVHTLSCGCVMFPYASNPSASVPKCVPPPAIHIRILRAMKLQ
PNEAEQWWESRVDTCEVNYLRQSYLHHLRGADMTASIPAHLSYLQLFHAH
RPSNALYALLDQVSQSSPRDWELREAIEWVAKAFRASEACVKERMCRDGP
GDQHDVFERELAFQVFGRLALFRNRNEVVRKFVSRLELTAGATRRDTKGV
VEDF*
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