Ggra10018.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10018.t1
Unique NameGgra10018.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length342
Homology
The following BLAST results are available for this feature:
BLAST of Ggra10018.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 113..140
NoneNo IPR availableCOILSCoilCoilcoord: 198..225
NoneNo IPR availableCOILSCoilCoilcoord: 286..323
NoneNo IPR availableCOILSCoilCoilcoord: 67..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 288..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..341
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 249..280
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..341
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..59
NoneNo IPR availablePANTHERPTHR14369:SF0SURFEIT LOCUS PROTEIN 6coord: 16..338
IPR029190Ribosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domainPFAMPF04935SURF6coord: 114..330
e-value: 2.4E-11
score: 43.8
IPR007019Surfeit locus 6PANTHERPTHR14369SURFEIT LOCUS PROTEIN 6coord: 16..338

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000222_piloncontigtig00000222_pilon:75556..76581 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10018.t1Ggra10018.t1Gracilaria gracilis GNS1m malemRNAtig00000222_pilon 75556..76581 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10018.t1 ID=Ggra10018.t1|Name=Ggra10018.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=342bp
MAPVMNSEEVNFNYYQEEDELWMRKVLDLIPRSLYGRPNSVKEKVGKSSK
GDTQEAKKSSKPKKKNRRRKKEERARLDLANESEERKELREKLRQKIMDK
RNERKADDDKSIQIRKERKRKREEAKADKAKKRKKEKRDKSKADKPSTEE
EDQPPELNEIDPIENTRHELKSSEPTMETTRLSGFASDDDKPRKPKRRKM
TDKKLNELQKQLEIATKEKEDKDLVSRKGTKDRPKPEAKGSSNSASGEEI
SERVKEREVEKAIQRVRGDSVKDDVGKIRKSIRKEKRKHEKSKEDWAKRV
KAVEDEKRSRQEQREKNLKERKESRAAGKKRKVGKHSKKKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029190Rrp14/SURF6_C
IPR007019SURF6