Ggra10003.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10003.t1
Unique NameGgra10003.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length447
Homology
The following BLAST results are available for this feature:
BLAST of Ggra10003.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 317..339
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..194
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..446
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000213_piloncontigtig00000213_pilon:154902..156578 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10003.t1Ggra10003.t1Gracilaria gracilis GNS1m malemRNAtig00000213_pilon 154902..156578 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10003.t1 ID=Ggra10003.t1|Name=Ggra10003.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=447bp
MQQPPSVSAVTAAAAAAAAAAAVSQPDLRGVRPSRAVLPSTRPAVNRFVR
PSATVPRPTAHVNASSLNASSLNASSLNASSLNASSLNASPAQPQPAVNR
VLPSTRPSANRYATAPTVPPLANAQLKASSLNTSSAQPQPPLKRVVPSTH
PSANRFARPLTTAARATAHVNASSLNAPSLSASSAQPQPATNRVLPSTRP
AVNRYATAPTAAVRANVQLKASSLNVSFAPPQPAQPQPAVKRVLPSTRPA
VNRYITAPTAAVRANAKLKASSLNVSSAQPQPAQPQPAVKRVLPSTRPSV
NRYAMAPTAAVNAHLQASSLNASSAQPQPATNRVVPSTRPSVNRYATAPT
AAVHANAQLKASSAVAVADTRAVKRKAVPRAAPAVNTNGNAAAAMSGADS
RAQAADHVVFDLEKFISLKSDDELWKCHEFYDGTLPPLMGSLEIPN*
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